EWM22509.1, cds8257 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22509.1 vs. NCBI_GenBank
Match: gi|585103015|gb|EWM22509.1| (NUDIX hydrolase domain-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1355.89 bits (3508), Expect = 0.000e+0 Identity = 666/666 (100.00%), Postives = 666/666 (100.00%), Query Frame = 0
Query: 1 MIDSMRPKAVLVDVNSLFACIDTKLEGSTTGNLAMSKNRRAIVPRFGAEQVLNYLREQQSKMEKGGSQAASLSITVVASGEAAVELVRGVESDLSLKCLLQGVSVLACKHVLAAGDGPQGQALLHAFLQEQRDETVGVPSPWAAARASRRESVDGCDTASPCSDSVYGNEQGQAVVLVIESSPCAPSPCASSPLSMPAVCVAVYSAAGVERGNPVDSIARSTGSHASNGHGPDAIPCTTLLHQQAGLSDLSQIDWRPLGLPPLEVDVQNPPFLWPRDYERALGLAQLVEARWWDLQHGQLNLVLGRAVHAENVLEVVAEEMGRRGEDGTVRAEGLDSLFVTVRHDFGIIARLLEDGYRIHHAGGGGTQVVLLRLFVKVEVPTAGTHICRSKVILYRTRRRGRAGFNQDSKGSAPMGMDVSGEGSGRRQGEGRVAARGEGDSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQDSQALDPPLKKVWPAFRARGWAPAAWFRHHPQCIDPGYETRKRCYMLSEDAGSEEEELQGRVPEHGKAGSGMTSSSSLMSASSSTSSFLPYHPRALLRDSCVSSLSCGEGASDWEGRSST 666
MIDSMRPKAVLVDVNSLFACIDTKLEGSTTGNLAMSKNRRAIVPRFGAEQVLNYLREQQSKMEKGGSQAASLSITVVASGEAAVELVRGVESDLSLKCLLQGVSVLACKHVLAAGDGPQGQALLHAFLQEQRDETVGVPSPWAAARASRRESVDGCDTASPCSDSVYGNEQGQAVVLVIESSPCAPSPCASSPLSMPAVCVAVYSAAGVERGNPVDSIARSTGSHASNGHGPDAIPCTTLLHQQAGLSDLSQIDWRPLGLPPLEVDVQNPPFLWPRDYERALGLAQLVEARWWDLQHGQLNLVLGRAVHAENVLEVVAEEMGRRGEDGTVRAEGLDSLFVTVRHDFGIIARLLEDGYRIHHAGGGGTQVVLLRLFVKVEVPTAGTHICRSKVILYRTRRRGRAGFNQDSKGSAPMGMDVSGEGSGRRQGEGRVAARGEGDSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQDSQALDPPLKKVWPAFRARGWAPAAWFRHHPQCIDPGYETRKRCYMLSEDAGSEEEELQGRVPEHGKAGSGMTSSSSLMSASSSTSSFLPYHPRALLRDSCVSSLSCGEGASDWEGRSST
Sbjct: 1 MIDSMRPKAVLVDVNSLFACIDTKLEGSTTGNLAMSKNRRAIVPRFGAEQVLNYLREQQSKMEKGGSQAASLSITVVASGEAAVELVRGVESDLSLKCLLQGVSVLACKHVLAAGDGPQGQALLHAFLQEQRDETVGVPSPWAAARASRRESVDGCDTASPCSDSVYGNEQGQAVVLVIESSPCAPSPCASSPLSMPAVCVAVYSAAGVERGNPVDSIARSTGSHASNGHGPDAIPCTTLLHQQAGLSDLSQIDWRPLGLPPLEVDVQNPPFLWPRDYERALGLAQLVEARWWDLQHGQLNLVLGRAVHAENVLEVVAEEMGRRGEDGTVRAEGLDSLFVTVRHDFGIIARLLEDGYRIHHAGGGGTQVVLLRLFVKVEVPTAGTHICRSKVILYRTRRRGRAGFNQDSKGSAPMGMDVSGEGSGRRQGEGRVAARGEGDSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQDSQALDPPLKKVWPAFRARGWAPAAWFRHHPQCIDPGYETRKRCYMLSEDAGSEEEELQGRVPEHGKAGSGMTSSSSLMSASSSTSSFLPYHPRALLRDSCVSSLSCGEGASDWEGRSST 666
BLAST of EWM22509.1 vs. NCBI_GenBank
Match: gi|666940225|gb|KEZ81949.1| (DNA mismatch repair protein MutT [Bacillus weihenstephanensis]) HSP 1 Score: 68.1662 bits (165), Expect = 5.866e-10 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 0
Query: 440 DSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQD 547
DS ++ + + ++ +PGG VE E+ +EA VREV+EETG + G+VAL E+ ++ G L FTF A V+ E+R +D EG A+E VD +A +
Sbjct: 13 DSEKDKILMVHNIEQNVWSLPGGAVEKGEILEEALVREVKEETGLTAALSGLVALNEK--FFEEKGHHALFFTFRANVVKGELRAED----EGEISAIEWVDRKIANE 114
BLAST of EWM22509.1 vs. NCBI_GenBank
Match: gi|507055622|ref|WP_016126543.1| (MULTISPECIES: NUDIX hydrolase [Bacillus cereus group] >gi|500322016|gb|EOO41775.1| 7,8-dihydro-8-oxoguanine triphosphatase [Bacillus cereus VDM019] >gi|573574261|gb|ETT72707.1| phosphohydrolase [Bacillus weihenstephanensis FSL H7-687] >gi|859596687|gb|KMQ18274.1| DNA mismatch repair protein MutT [Bacillus mycoides] >gi|1017118761|gb|KZE07897.1| Nudix hydrolase family protein [Bacillus mycoides] >gi|1189478128|gb|OSY12790.1| hypothetical protein BTJ48_05799 [Bacillus mycoides] >gi|1194021038|gb|OTY23093.1| DNA mismatch repair protein MutT [Bacillus thuringiensis serovar asturiensis]) HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-10 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 0
Query: 440 DSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQD 547
DS ++ + + ++ +PGG VE E+ +EA VREV+EETG + G+VAL E+ ++ G L FTF A V+ E+R +D EG A+E VD +A +
Sbjct: 13 DSEKDKILMVHNIEQNVWSLPGGAVEKGEILEEALVREVKEETGLTAALSGLVALNEK--FFEEKGHHALFFTFRANVVKGELRAED----EGEISAIEWVDRKIANE 114
BLAST of EWM22509.1 vs. NCBI_GenBank
Match: gi|488044717|ref|WP_002116114.1| (MULTISPECIES: NUDIX hydrolase [Bacillus cereus group] >gi|401146985|gb|EJQ54494.1| hypothetical protein IEQ_00466 [Bacillus cereus BAG6X1-2] >gi|1063131635|emb|SCM92156.1| Uncharacterized protein BWINRASL_00570 [Bacillus weihenstephanensis]) HSP 1 Score: 67.781 bits (164), Expect = 6.524e-10 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 0
Query: 440 DSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQD 547
DS ++ + + ++ +PGG VE E+ +EA VREV+EETG G+VA+ E+ ++ G L+FTF A V SE+R +D EG A+E VD +A +
Sbjct: 13 DSEKDKILMVHNVEQNVWSLPGGAVEKGEILEEALVREVKEETGLTAMAGGLVAINEK--FFEESGNHALLFTFRANVVTSELRAED----EGEISAIEWVDRKIANE 114
BLAST of EWM22509.1 vs. NCBI_GenBank
Match: gi|1184761194|ref|WP_085309069.1| (DNA mismatch repair protein MutT [Bacillus mycoides] >gi|1182075034|gb|ARJ20367.1| DNA mismatch repair protein MutT [Bacillus mycoides]) HSP 1 Score: 67.3958 bits (163), Expect = 9.239e-10 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 440 DSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQD 547
DS ++ + + ++ +PGG VE E+ +EA VREV+EETG + G+VAL E+ ++ G L FTF A V E+R +D EG A+E VD +A +
Sbjct: 13 DSEKDKILMVHNIEQNVWSLPGGAVEKGEILEEALVREVKEETGLTATLSGLVALNEK--FFEEKGHHALFFTFRANVVTGELRAED----EGEISAIEWVDRKIANE 114
BLAST of EWM22509.1 vs. NCBI_GenBank
Match: gi|488019593|ref|WP_002090992.1| (MULTISPECIES: NUDIX hydrolase [Bacillus cereus group] >gi|228751182|gb|EEM00994.1| MutT/NUDIX [Bacillus mycoides DSM 2048] >gi|401074839|gb|EJP83232.1| 7,8-dihydro-8-oxoguanine triphosphatase [Bacillus cereus VD142] >gi|401152871|gb|EJQ60300.1| hypothetical protein IEY_04865 [Bacillus cereus CER074] >gi|401159389|gb|EJQ66773.1| hypothetical protein IEW_00467 [Bacillus cereus CER057] >gi|401228318|gb|EJR34841.1| hypothetical protein III_04721 [Bacillus cereus VD078] >gi|401292622|gb|EJR98277.1| hypothetical protein IKM_04989 [Bacillus cereus VDM022] >gi|402440807|gb|EJV72792.1| hypothetical protein IEU_00468 [Bacillus cereus BtB2-4] >gi|402457886|gb|EJV89641.1| hypothetical protein IG3_00087 [Bacillus cereus HuA2-1] >gi|500432894|gb|EOP46848.1| 7,8-dihydro-8-oxoguanine triphosphatase [Bacillus cereus VD146] >gi|753371379|gb|AJH18665.1| NUDIX domain protein [Bacillus mycoides] >gi|758823912|gb|KIV62591.1| Nudix hydrolase family protein [Bacillus mycoides] >gi|971472030|gb|KUH44272.1| hypothetical protein M2E15_5451 [Bacillus mycoides] >gi|1099415676|emb|SFQ81637.1| 8-oxo-dGTP diphosphatase [Bacillus sp. ok634] >gi|1151465863|gb|OOQ98833.1| DNA mismatch repair protein MutT [Bacillus mycoides] >gi|1151502951|gb|OOR33560.1| DNA mismatch repair protein MutT [Bacillus mycoides] >gi|1151530283|gb|OOR59161.1| DNA mismatch repair protein MutT [Bacillus mycoides] >gi|1151540045|gb|OOR68389.1| DNA mismatch repair protein MutT [Bacillus mycoides] >gi|1189457190|gb|OSX92178.1| hypothetical protein S3E15_05774 [Bacillus mycoides] >gi|1189471136|gb|OSY05861.1| hypothetical protein S2E19_00836 [Bacillus mycoides] >gi|1189478790|gb|OSY13447.1| hypothetical protein BTJ44_02454 [Bacillus mycoides] >gi|1194024097|gb|OTY26080.1| DNA mismatch repair protein MutT [Bacillus thuringiensis serovar navarrensis]) HSP 1 Score: 67.3958 bits (163), Expect = 1.058e-9 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 440 DSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQD 547
DS ++ + + ++ +PGG VE E+ +EA VREV+EETG + G+VAL E+ ++ G L FTF A V E+R +D EG A+E VD +A +
Sbjct: 13 DSEKDKILMVHNIEQNVWSLPGGAVEKGEILEEALVREVKEETGLTAALSGLVALNEK--FFEEKGHHALFFTFRANVVTGELRAED----EGEISAIEWVDRKIANE 114
BLAST of EWM22509.1 vs. NCBI_GenBank
Match: gi|488116879|ref|WP_002188276.1| (MULTISPECIES: NUDIX hydrolase [Bacillus cereus group] >gi|401305555|gb|EJS11090.1| hypothetical protein IKO_00115 [Bacillus cereus VDM034] >gi|401306428|gb|EJS11920.1| hypothetical protein IKS_05071 [Bacillus cereus VDM062] >gi|1151473580|gb|OOR06080.1| DNA mismatch repair protein MutT [Bacillus weihenstephanensis]) HSP 1 Score: 67.0106 bits (162), Expect = 1.176e-9 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0
Query: 440 DSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQD 547
DS ++ + + ++ +PGG VE E+ +EA VREV+EETG + G+VAL E+ ++ G L FTF A V E+R +D EG A+E VD +A +
Sbjct: 13 DSEKDKILMVHNIEQNVWSLPGGAVEKGEILEEALVREVKEETGLTAALSGLVALNEK--FFEEKGHHALFFTFRANVVTGELRAED----EGEISAIEWVDRKIANE 114
BLAST of EWM22509.1 vs. NCBI_GenBank
Match: gi|1005605125|ref|WP_061689219.1| (NUDIX hydrolase [Bacillus cereus] >gi|1003848400|gb|KXY43712.1| DNA mismatch repair protein MutT [Bacillus cereus]) HSP 1 Score: 66.6254 bits (161), Expect = 1.634e-9 Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 440 DSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQD 547
DS ++ + + ++ +PGG VE E+ +EA VREV+EETG + G+VAL E+ K G L FTF A V E+R +D EG A+E VD +A +
Sbjct: 13 DSEKDKILMVHNIEQNVWSLPGGAVEKGEILEEALVREVKEETGLTAVLSGLVALNEKFFEDK--GHHALFFTFRANVVTGELRAED----EGEISAIEWVDRKIANE 114
BLAST of EWM22509.1 vs. NCBI_GenBank
Match: gi|507025145|ref|WP_016097212.1| (NUDIX hydrolase [Bacillus cereus] >gi|500287123|gb|EOO11578.1| 7,8-dihydro-8-oxoguanine triphosphatase [Bacillus cereus HuA3-9]) HSP 1 Score: 66.6254 bits (161), Expect = 1.715e-9 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 440 DSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQD 547
DS ++ + + ++ +PGG VE E+ +EA VREV+EETG G+VAL E+ ++ G L FTF A V E+R +D EG A+E VD +A +
Sbjct: 13 DSEKDKILMVHNIEQNVWSLPGGAVEKGEILEEALVREVKEETGLTAAFSGLVALNEK--FFEEKGHHALFFTFRANVVTGELRAED----EGEISAIEWVDRKIANE 114
BLAST of EWM22509.1 vs. NCBI_GenBank
Match: gi|487991563|ref|WP_002063761.1| (NUDIX hydrolase [Bacillus cereus] >gi|228720872|gb|EEL72421.1| MutT/NUDIX [Bacillus cereus AH603]) HSP 1 Score: 66.6254 bits (161), Expect = 1.748e-9 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0
Query: 440 DSRSLEVFLFRRRSKGIYKMPGGHVELKELADEAAVREVREETGFACRVVGMVALTERKDVGKKWGCSQLMFTFAAEWVESEMRLDDAVSREGSWFALEEVDAMVAQD 547
DS ++ + + ++ +PGG VE E+ +EA VREV+EETG G+VAL E+ ++ G L FTF A V E+R +D EG A+E VD +A +
Sbjct: 13 DSEKDKILMVHNIEQNVWSLPGGAVEKGEILEEALVREVKEETGLTAVFSGLVALNEK--FFEEKGHHALFFTFRANVVTGELRAED----EGEISAIEWVDRKIANE 114 The following BLAST results are available for this feature:
BLAST of EWM22509.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|