EWM22441.1, cds8237 (CDS) Nannochloropsis gaditana

Overview
NameEWM22441.1
Unique Namecds8237
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:218674..219464 -
Alignment locationKK037248.1:217897..218605 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22441.1
Productfidgetin-like 1
Orig transcript idgnl|cribi|Naga_100011g72.3441.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:218674..219464 -
KK037248.1supercontigKK037248.1:217897..218605 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR003960ATPase_AAA_CS
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
IPR007330MIT
Homology
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|585102947|gb|EWM22441.1| (fidgetin-like 1 [Nannochloropsis gaditana])

HSP 1 Score: 1016.53 bits (2627), Expect = 0.000e+0
Identity = 499/499 (100.00%), Postives = 499/499 (100.00%), Query Frame = 0
Query:    1 MSGPSDGPSFHGVSVFGSVKRKTSVPAPTSSSLPNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQDRAGNDQIKRAANKYLTRAEEIDRLLTLRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKYMTDNGYIRHS 499
            MSGPSDGPSFHGVSVFGSVKRKTSVPAPTSSSLPNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQDRAGNDQIKRAANKYLTRAEEIDRLLTLRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKYMTDNGYIRHS
Sbjct:    1 MSGPSDGPSFHGVSVFGSVKRKTSVPAPTSSSLPNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQDRAGNDQIKRAANKYLTRAEEIDRLLTLRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKYMTDNGYIRHS 499          
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|298706119|emb|CBJ29212.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 358.607 bits (919), Expect = 4.998e-115
Identity = 177/286 (61.89%), Postives = 222/286 (77.62%), Query Frame = 0
Query:  204 SDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKY 489
            S+LE  ++E+MLD SPGVTW+ I+GLE AK TLQE V+LPNLRPDLF GLRAP RGVLL+GPPGTGKT+LAKAVA+E+G+AFF+ISASSL SK++GEGEKMVRALF VAR  +P+VVFIDEIDS+L  R + EHEA+RRLKTEFLVQLDGAG   +DR+LV+ ATNLP  LDEA LRRL +++++PLPD   R  L+  LL  QK  +    L  +VG T GYS SDL Q+ K+AAM P+RDL G  +RTV    +R I++ DF  A+  + PSVS+ TV+ +E++
Sbjct:  241 SELENKILEDMLDSSPGVTWDSIAGLEYAKQTLQETVILPNLRPDLFTGLRAPARGVLLYGPPGTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVVFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGNIKGAALASLVGMTEGYSGSDLKQLCKEAAMQPIRDL-GTRVRTVAVKDVRGINLDDFRAALPKVLPSVSRKTVERYEEW 525          
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|695374791|ref|XP_009515381.1| (hypothetical protein PHYSODRAFT_554382 [Phytophthora sojae] >gi|348688292|gb|EGZ28106.1| hypothetical protein PHYSODRAFT_554382 [Phytophthora sojae])

HSP 1 Score: 350.903 bits (899), Expect = 1.279e-113
Identity = 203/463 (43.84%), Postives = 276/463 (59.61%), Query Frame = 0
Query:   34 PNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQ--DRAGNDQIKRAANKYLTRAEEIDRLLTLRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKYMTDNG 494
            P  ++Q+A++ A   V  D+ G+ EEA  LY   +  ++A + Q  D     ++++  N+Y+ RAE +       K  T E      K+ A++ +   AST  ++ G A  A                  GR           H   G +    E +                     +++E+LD SPGV W  I+GL+ AK  LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E    FF+ISASSL SK++GEGEK+VRALF++AR  QPSVVF+DEID++L  R   E+EA+RR+K +F  +LDGA +  EDRILVMGATNLP  LDEA++RRL K+I++PLPD  +R  L+++LL SQK +L+   +  IV  T GYS SDL  V KDAA+GP+R+L G  +  VK   +R I+ +DF  A+  +RPSVS  T++A   +    G
Sbjct:    9 PEDAIQKAIEAA---VAADKAGKYEEAIDLYASGIEKMMAQLGQLPDDEAKTKLRQKINEYMVRAEYL-------KDWTAEQAR---KQQAQTQD---ASTSSVQDGNARTA-----------------SGR----------QHHKAGYSKQNAEHAH-------------------TILDEVLDHSPGVHWGDIAGLQVAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENEASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDAPSREGLIRHLLGSQKFSLSSKDIKHIVKATEGYSGSDLKAVCKDAALGPIREL-GAKVANVKAEDVRGINASDFQVALMRVRPSVSTTTIEALVSWNEQYG 408          
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|675205537|ref|XP_008911653.1| (hypothetical protein PPTG_16090 [Phytophthora parasitica INRA-310] >gi|566014613|gb|ETI37524.1| hypothetical protein F443_16482 [Phytophthora parasitica P1569] >gi|567952078|gb|ETK77759.1| hypothetical protein L915_16014 [Phytophthora parasitica] >gi|568010260|gb|ETL84450.1| hypothetical protein L917_15707 [Phytophthora parasitica] >gi|568040164|gb|ETM37626.1| hypothetical protein L914_15844 [Phytophthora parasitica] >gi|568088247|gb|ETN03109.1| hypothetical protein PPTG_16090 [Phytophthora parasitica INRA-310])

HSP 1 Score: 348.977 bits (894), Expect = 5.705e-113
Identity = 198/455 (43.52%), Postives = 267/455 (58.68%), Query Frame = 0
Query:   34 PNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQ--DRAGNDQIKRAANKYLTRAEEIDRLLT--LRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484
            P  ++Q+   + + AV  D+ G+  EA  LY   +  ++A + Q  +      +++  N+Y+ RAE I   +    RKQQT+ +  S    + + NN                  PT S            G + R G       H                                  +++E+LD SPGV W  I+GLE AK  LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E    FF+ISASSL SK++GEGEK+VRALF++AR  QPSVVF+DEID++L  R   E++A+RR+K +F  +LDGA +  EDRILVMGATNLP  LDEA++RRL K+I++PLPD  +R  L+++LL SQK +++     +IV  T GYS SDL  V KDAA+GP+R+L G  +  VK   +R I+ +DF  A+  +RPSVS  T+Q
Sbjct:    9 PEDAIQK---IIEEAVAADKAGKYAEAVELYASGIEKMMAQMAQLPNEEAQTHMRQKINEYMLRAEHIKEWMAEQARKQQTQNASVS----NTQGNN-----------------APTSS------------GRQQRTGYSKQHAEHAHT-------------------------------ILDEVLDHSPGVHWTDIAGLEIAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFSMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIREL-GARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQ 395          
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|567980737|gb|ETL31189.1| (hypothetical protein L916_15909 [Phytophthora parasitica] >gi|570318360|gb|ETO66308.1| hypothetical protein F444_16446 [Phytophthora parasitica P1976] >gi|570942144|gb|ETP07401.1| hypothetical protein F441_16303 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 347.821 bits (891), Expect = 1.857e-112
Identity = 198/455 (43.52%), Postives = 266/455 (58.46%), Query Frame = 0
Query:   34 PNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQ--DRAGNDQIKRAANKYLTRAEEIDRLLT--LRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484
            P  ++Q+   + + AV  D+ G+  EA  LY   +  ++A + Q  +      +++  N+Y+ RAE I   +    RKQQT+ +  S    + + NN                  PT S            G + R G       H                                  +++E+LD SPGV W  I+GLE AK  LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E    FF+ISASSL SK++GEGEK+VRALF++AR  QPSVVF+DEID++L  R   E++A+RR+K +F  +LDGA +  EDRILVMGATNLP  LDEA++RRL K+I++PLPD  +R  L+++LL SQK  ++     +IV  T GYS SDL  V KDAA+GP+R+L G  +  VK   +R I+ +DF  A+  +RPSVS  T+Q
Sbjct:    9 PEDAIQK---IIEEAVAADKAGKYAEAVELYASGIEKMMAQMAQLPNEEAQTHMRQKINEYMLRAEHIKEWMAEQARKQQTQNASVS----NTQGNN-----------------APTSS------------GRQQRTGYSKQHAEHAHT-------------------------------ILDEVLDHSPGVHWTDIAGLEIAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFFMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIREL-GARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQ 395          
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|575471736|ref|XP_006675161.1| (hypothetical protein BATDEDRAFT_18251 [Batrachochytrium dendrobatidis JAM81] >gi|328773026|gb|EGF83063.1| hypothetical protein BATDEDRAFT_18251 [Batrachochytrium dendrobatidis JAM81])

HSP 1 Score: 343.199 bits (879), Expect = 2.368e-112
Identity = 163/286 (56.99%), Postives = 222/286 (77.62%), Query Frame = 0
Query:  209 IVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKYMTDNG 494
            +++ E++   P V+WE I GL+ AK  L+E VVLPNLRP+LF GLRAP RGVLLFGPPGTGKT+LAKA+A E+   FFSISAS+L SK+ GEGEKMVR+LF++A++ QPSV+FIDEIDS+L +R + EHEA+RRLKTEFL+Q DG G+ ++DR+LV+GATN P  LDEA LRRL K+++IPLP+  TR+ LL +LL++ KH+L+   +  +VG ++GYS SDL  VA++A++GP+R L   ++ T  E+ +R I++ DF HA+  IRPSVS  T+Q FEK+  + G
Sbjct:    4 LILNEVIVDKPNVSWEDIVGLDAAKQALREIVVLPNLRPELFTGLRAPARGVLLFGPPGTGKTMLAKALAKESKATFFSISASTLTSKYFGEGEKMVRSLFEMAKQLQPSVIFIDEIDSILTERSESEHEASRRLKTEFLLQFDGIGSSSDDRVLVLGATNRPQELDEAALRRLVKRVYIPLPEATTRSALLVHLLKNHKHSLSEADVRRLVGASSGYSGSDLTAVAREASLGPIRVLGDKLISTPTED-IRGITLGDFSHALKIIRPSVSASTIQIFEKWNLEKG 288          
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|570972670|gb|ETP35462.1| (hypothetical protein F442_16316 [Phytophthora parasitica P10297])

HSP 1 Score: 344.739 bits (883), Expect = 3.132e-111
Identity = 200/455 (43.96%), Postives = 268/455 (58.90%), Query Frame = 0
Query:   34 PNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQ--DRAGNDQIKRAANKYLTRAEEIDRLLT--LRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484
            P  ++Q+   + + AV  D+ G+  EA  LY   +  ++A + Q  +      +++  N+Y+ RAE I   +    RKQQ              + N  +++T+G          PT S             GR +K                             TG     A     I ++E+LD SPGV W  I+GLE AK  LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E    FF+ISASSL SK++GEGEK+VRALF++AR  QPSVVF+DEID++L  R   E++A+RR+K +F  +LDGA +  EDRILVMGATNLP  LDEA++RRL K+I++PLPD  +R  L+++LL SQK  ++     +IV  T GYS SDL  V KDAA+GP+R+L G  +  VK   +R I+ +DF  A+  +RPSVS  T+Q
Sbjct:    9 PEDAIQK---IIEEAVAADKAGKYAEAVELYASGIEKMMAQMAQLPNEEAQTHMRQKINEYMLRAEHIKEWMAEQARKQQ--------------TQNASVSNTQG-------NNAPTSS-------------GRQQK-----------------------------TGYSKQHAEHAHTI-LDEVLDHSPGVHWTDIAGLEIAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFFMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIREL-GARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQ 395          
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|301117244|ref|XP_002906350.1| (spastin and Fidgetin-like protein [Phytophthora infestans T30-4] >gi|262107699|gb|EEY65751.1| spastin and Fidgetin-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 342.428 bits (877), Expect = 2.611e-110
Identity = 198/455 (43.52%), Postives = 269/455 (59.12%), Query Frame = 0
Query:   34 PNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQ--DRAGNDQIKRAANKYLTRAEEIDRLLT--LRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484
            P+ ++Q+   + + AV  D+ G+  EA  LY   +  ++A + +  +     Q +   N+Y+ RAE I   +    R QQT+              N  + ST+G      S A  T  R  +R               GG +  H                                  +++E+LD SPGV W  I+GL+ AK  LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E    FF+ISASSL SK++GEGEK+VRALF++AR  QPSVVF+DEID++L  R   E++A+RR+K +F ++LDGA +  EDR+LVMGATNLP  LDEA++RRL K+I++PLPD  +R  L+++LL+SQK +L+      IV  T GYS SDL  V KDAA+GP+R+L G  +  VK   +R I+ +DF  A+  +RPSVS  T+Q
Sbjct:    9 PDDAIQK---IIEEAVAADKAGKYAEAVELYASGIEKMMAQMAELPNEEAKTQSRLKINEYMLRAEYIKDWMADQARTQQTQ--------------NTSVPSTQG------SNARATSGRQEQR---------------GGYSKQHAEHAHT----------------------------ILDEVLDHSPGVHWTDIAGLDVAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFIELDGAASSQEDRVLVMGATNLPQELDEAIVRRLEKRIYVPLPDPSSREGLIRHLLRSQKFSLSSRDFKLIVKVTEGYSGSDLKAVCKDAALGPIREL-GAKVANVKAEDVRGINASDFQVALTRVRPSVSSTTIQ 396          
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|675205539|ref|XP_008911654.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566014616|gb|ETI37527.1| hypothetical protein, variant 3 [Phytophthora parasitica P1569] >gi|567952079|gb|ETK77760.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568010263|gb|ETL84453.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568040167|gb|ETM37629.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568088248|gb|ETN03110.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310])

HSP 1 Score: 339.347 bits (869), Expect = 5.523e-110
Identity = 165/275 (60.00%), Postives = 211/275 (76.73%), Query Frame = 0
Query:  210 VMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484
            +++E+LD SPGV W  I+GLE AK  LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E    FF+ISASSL SK++GEGEK+VRALF++AR  QPSVVF+DEID++L  R   E++A+RR+K +F  +LDGA +  EDRILVMGATNLP  LDEA++RRL K+I++PLPD  +R  L+++LL SQK +++     +IV  T GYS SDL  V KDAA+GP+R+L G  +  VK   +R I+ +DF  A+  +RPSVS  T+Q
Sbjct:   64 ILDEVLDHSPGVHWTDIAGLEIAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFSMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIREL-GARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQ 337          
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|675205541|ref|XP_008911655.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|675205543|ref|XP_008911656.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|567952080|gb|ETK77761.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568088249|gb|ETN03111.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|568088250|gb|ETN03112.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310])

HSP 1 Score: 338.191 bits (866), Expect = 6.806e-110
Identity = 165/275 (60.00%), Postives = 211/275 (76.73%), Query Frame = 0
Query:  210 VMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484
            +++E+LD SPGV W  I+GLE AK  LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E    FF+ISASSL SK++GEGEK+VRALF++AR  QPSVVF+DEID++L  R   E++A+RR+K +F  +LDGA +  EDRILVMGATNLP  LDEA++RRL K+I++PLPD  +R  L+++LL SQK +++     +IV  T GYS SDL  V KDAA+GP+R+L G  +  VK   +R I+ +DF  A+  +RPSVS  T+Q
Sbjct:   42 ILDEVLDHSPGVHWTDIAGLEIAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFSMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIREL-GARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQ 315          
The following BLAST results are available for this feature:
BLAST of EWM22441.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102947|gb|EWM22441.1|0.000e+0100.00fidgetin-like 1 [Nannochloropsis gaditana][more]
gi|298706119|emb|CBJ29212.1|4.998e-11561.89conserved unknown protein [Ectocarpus siliculosus][more]
gi|695374791|ref|XP_009515381.1|1.279e-11343.84hypothetical protein PHYSODRAFT_554382 [Phytophtho... [more]
gi|675205537|ref|XP_008911653.1|5.705e-11343.52hypothetical protein PPTG_16090 [Phytophthora para... [more]
gi|567980737|gb|ETL31189.1|1.857e-11243.52hypothetical protein L916_15909 [Phytophthora para... [more]
gi|575471736|ref|XP_006675161.1|2.368e-11256.99hypothetical protein BATDEDRAFT_18251 [Batrachochy... [more]
gi|570972670|gb|ETP35462.1|3.132e-11143.96hypothetical protein F442_16316 [Phytophthora para... [more]
gi|301117244|ref|XP_002906350.1|2.611e-11043.52spastin and Fidgetin-like protein [Phytophthora in... [more]
gi|675205539|ref|XP_008911654.1|5.523e-11060.00hypothetical protein, variant 1 [Phytophthora para... [more]
gi|675205541|ref|XP_008911655.1|6.806e-11060.00hypothetical protein, variant 2 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8261rna8261Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications