EWM22441.1, cds8237 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|585102947|gb|EWM22441.1| (fidgetin-like 1 [Nannochloropsis gaditana]) HSP 1 Score: 1016.53 bits (2627), Expect = 0.000e+0 Identity = 499/499 (100.00%), Postives = 499/499 (100.00%), Query Frame = 0 Query: 1 MSGPSDGPSFHGVSVFGSVKRKTSVPAPTSSSLPNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQDRAGNDQIKRAANKYLTRAEEIDRLLTLRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKYMTDNGYIRHS 499 MSGPSDGPSFHGVSVFGSVKRKTSVPAPTSSSLPNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQDRAGNDQIKRAANKYLTRAEEIDRLLTLRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKYMTDNGYIRHS Sbjct: 1 MSGPSDGPSFHGVSVFGSVKRKTSVPAPTSSSLPNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQDRAGNDQIKRAANKYLTRAEEIDRLLTLRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKYMTDNGYIRHS 499
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|298706119|emb|CBJ29212.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 358.607 bits (919), Expect = 4.998e-115 Identity = 177/286 (61.89%), Postives = 222/286 (77.62%), Query Frame = 0 Query: 204 SDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKY 489 S+LE ++E+MLD SPGVTW+ I+GLE AK TLQE V+LPNLRPDLF GLRAP RGVLL+GPPGTGKT+LAKAVA+E+G+AFF+ISASSL SK++GEGEKMVRALF VAR +P+VVFIDEIDS+L R + EHEA+RRLKTEFLVQLDGAG +DR+LV+ ATNLP LDEA LRRL +++++PLPD R L+ LL QK + L +VG T GYS SDL Q+ K+AAM P+RDL G +RTV +R I++ DF A+ + PSVS+ TV+ +E++ Sbjct: 241 SELENKILEDMLDSSPGVTWDSIAGLEYAKQTLQETVILPNLRPDLFTGLRAPARGVLLYGPPGTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVVFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGAGQGGDDRLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGNIKGAALASLVGMTEGYSGSDLKQLCKEAAMQPIRDL-GTRVRTVAVKDVRGINLDDFRAALPKVLPSVSRKTVERYEEW 525
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|695374791|ref|XP_009515381.1| (hypothetical protein PHYSODRAFT_554382 [Phytophthora sojae] >gi|348688292|gb|EGZ28106.1| hypothetical protein PHYSODRAFT_554382 [Phytophthora sojae]) HSP 1 Score: 350.903 bits (899), Expect = 1.279e-113 Identity = 203/463 (43.84%), Postives = 276/463 (59.61%), Query Frame = 0 Query: 34 PNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQ--DRAGNDQIKRAANKYLTRAEEIDRLLTLRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKYMTDNG 494 P ++Q+A++ A V D+ G+ EEA LY + ++A + Q D ++++ N+Y+ RAE + K T E K+ A++ + AST ++ G A A GR H G + E + +++E+LD SPGV W I+GL+ AK LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E FF+ISASSL SK++GEGEK+VRALF++AR QPSVVF+DEID++L R E+EA+RR+K +F +LDGA + EDRILVMGATNLP LDEA++RRL K+I++PLPD +R L+++LL SQK +L+ + IV T GYS SDL V KDAA+GP+R+L G + VK +R I+ +DF A+ +RPSVS T++A + G Sbjct: 9 PEDAIQKAIEAA---VAADKAGKYEEAIDLYASGIEKMMAQLGQLPDDEAKTKLRQKINEYMVRAEYL-------KDWTAEQAR---KQQAQTQD---ASTSSVQDGNARTA-----------------SGR----------QHHKAGYSKQNAEHAH-------------------TILDEVLDHSPGVHWGDIAGLQVAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENEASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDAPSREGLIRHLLGSQKFSLSSKDIKHIVKATEGYSGSDLKAVCKDAALGPIREL-GAKVANVKAEDVRGINASDFQVALMRVRPSVSTTTIEALVSWNEQYG 408
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|675205537|ref|XP_008911653.1| (hypothetical protein PPTG_16090 [Phytophthora parasitica INRA-310] >gi|566014613|gb|ETI37524.1| hypothetical protein F443_16482 [Phytophthora parasitica P1569] >gi|567952078|gb|ETK77759.1| hypothetical protein L915_16014 [Phytophthora parasitica] >gi|568010260|gb|ETL84450.1| hypothetical protein L917_15707 [Phytophthora parasitica] >gi|568040164|gb|ETM37626.1| hypothetical protein L914_15844 [Phytophthora parasitica] >gi|568088247|gb|ETN03109.1| hypothetical protein PPTG_16090 [Phytophthora parasitica INRA-310]) HSP 1 Score: 348.977 bits (894), Expect = 5.705e-113 Identity = 198/455 (43.52%), Postives = 267/455 (58.68%), Query Frame = 0 Query: 34 PNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQ--DRAGNDQIKRAANKYLTRAEEIDRLLT--LRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484 P ++Q+ + + AV D+ G+ EA LY + ++A + Q + +++ N+Y+ RAE I + RKQQT+ + S + + NN PT S G + R G H +++E+LD SPGV W I+GLE AK LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E FF+ISASSL SK++GEGEK+VRALF++AR QPSVVF+DEID++L R E++A+RR+K +F +LDGA + EDRILVMGATNLP LDEA++RRL K+I++PLPD +R L+++LL SQK +++ +IV T GYS SDL V KDAA+GP+R+L G + VK +R I+ +DF A+ +RPSVS T+Q Sbjct: 9 PEDAIQK---IIEEAVAADKAGKYAEAVELYASGIEKMMAQMAQLPNEEAQTHMRQKINEYMLRAEHIKEWMAEQARKQQTQNASVS----NTQGNN-----------------APTSS------------GRQQRTGYSKQHAEHAHT-------------------------------ILDEVLDHSPGVHWTDIAGLEIAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFSMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIREL-GARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQ 395
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|567980737|gb|ETL31189.1| (hypothetical protein L916_15909 [Phytophthora parasitica] >gi|570318360|gb|ETO66308.1| hypothetical protein F444_16446 [Phytophthora parasitica P1976] >gi|570942144|gb|ETP07401.1| hypothetical protein F441_16303 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 347.821 bits (891), Expect = 1.857e-112 Identity = 198/455 (43.52%), Postives = 266/455 (58.46%), Query Frame = 0 Query: 34 PNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQ--DRAGNDQIKRAANKYLTRAEEIDRLLT--LRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484 P ++Q+ + + AV D+ G+ EA LY + ++A + Q + +++ N+Y+ RAE I + RKQQT+ + S + + NN PT S G + R G H +++E+LD SPGV W I+GLE AK LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E FF+ISASSL SK++GEGEK+VRALF++AR QPSVVF+DEID++L R E++A+RR+K +F +LDGA + EDRILVMGATNLP LDEA++RRL K+I++PLPD +R L+++LL SQK ++ +IV T GYS SDL V KDAA+GP+R+L G + VK +R I+ +DF A+ +RPSVS T+Q Sbjct: 9 PEDAIQK---IIEEAVAADKAGKYAEAVELYASGIEKMMAQMAQLPNEEAQTHMRQKINEYMLRAEHIKEWMAEQARKQQTQNASVS----NTQGNN-----------------APTSS------------GRQQRTGYSKQHAEHAHT-------------------------------ILDEVLDHSPGVHWTDIAGLEIAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFFMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIREL-GARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQ 395
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|575471736|ref|XP_006675161.1| (hypothetical protein BATDEDRAFT_18251 [Batrachochytrium dendrobatidis JAM81] >gi|328773026|gb|EGF83063.1| hypothetical protein BATDEDRAFT_18251 [Batrachochytrium dendrobatidis JAM81]) HSP 1 Score: 343.199 bits (879), Expect = 2.368e-112 Identity = 163/286 (56.99%), Postives = 222/286 (77.62%), Query Frame = 0 Query: 209 IVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQAFEKYMTDNG 494 +++ E++ P V+WE I GL+ AK L+E VVLPNLRP+LF GLRAP RGVLLFGPPGTGKT+LAKA+A E+ FFSISAS+L SK+ GEGEKMVR+LF++A++ QPSV+FIDEIDS+L +R + EHEA+RRLKTEFL+Q DG G+ ++DR+LV+GATN P LDEA LRRL K+++IPLP+ TR+ LL +LL++ KH+L+ + +VG ++GYS SDL VA++A++GP+R L ++ T E+ +R I++ DF HA+ IRPSVS T+Q FEK+ + G Sbjct: 4 LILNEVIVDKPNVSWEDIVGLDAAKQALREIVVLPNLRPELFTGLRAPARGVLLFGPPGTGKTMLAKALAKESKATFFSISASTLTSKYFGEGEKMVRSLFEMAKQLQPSVIFIDEIDSILTERSESEHEASRRLKTEFLLQFDGIGSSSDDRVLVLGATNRPQELDEAALRRLVKRVYIPLPEATTRSALLVHLLKNHKHSLSEADVRRLVGASSGYSGSDLTAVAREASLGPIRVLGDKLISTPTED-IRGITLGDFSHALKIIRPSVSASTIQIFEKWNLEKG 288
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|570972670|gb|ETP35462.1| (hypothetical protein F442_16316 [Phytophthora parasitica P10297]) HSP 1 Score: 344.739 bits (883), Expect = 3.132e-111 Identity = 200/455 (43.96%), Postives = 268/455 (58.90%), Query Frame = 0 Query: 34 PNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQ--DRAGNDQIKRAANKYLTRAEEIDRLLT--LRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484 P ++Q+ + + AV D+ G+ EA LY + ++A + Q + +++ N+Y+ RAE I + RKQQ + N +++T+G PT S GR +K TG A I ++E+LD SPGV W I+GLE AK LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E FF+ISASSL SK++GEGEK+VRALF++AR QPSVVF+DEID++L R E++A+RR+K +F +LDGA + EDRILVMGATNLP LDEA++RRL K+I++PLPD +R L+++LL SQK ++ +IV T GYS SDL V KDAA+GP+R+L G + VK +R I+ +DF A+ +RPSVS T+Q Sbjct: 9 PEDAIQK---IIEEAVAADKAGKYAEAVELYASGIEKMMAQMAQLPNEEAQTHMRQKINEYMLRAEHIKEWMAEQARKQQ--------------TQNASVSNTQG-------NNAPTSS-------------GRQQK-----------------------------TGYSKQHAEHAHTI-LDEVLDHSPGVHWTDIAGLEIAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFFMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIREL-GARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQ 395
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|301117244|ref|XP_002906350.1| (spastin and Fidgetin-like protein [Phytophthora infestans T30-4] >gi|262107699|gb|EEY65751.1| spastin and Fidgetin-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 342.428 bits (877), Expect = 2.611e-110 Identity = 198/455 (43.52%), Postives = 269/455 (59.12%), Query Frame = 0 Query: 34 PNPSVQRALQVAQRAVELDECGRAEEAFPLYQEAVALLLAAVKQ--DRAGNDQIKRAANKYLTRAEEIDRLLT--LRKQQTKESPNSRLKKDARSNNFPLASTKGLEKGRASAAVPTGSRMPRRPDDYDYTGGRARKGEGGAAVSHGSVGRAGGMGERSGGNTLSSTGARPGRASDLEAIVMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484 P+ ++Q+ + + AV D+ G+ EA LY + ++A + + + Q + N+Y+ RAE I + R QQT+ N + ST+G S A T R +R GG + H +++E+LD SPGV W I+GL+ AK LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E FF+ISASSL SK++GEGEK+VRALF++AR QPSVVF+DEID++L R E++A+RR+K +F ++LDGA + EDR+LVMGATNLP LDEA++RRL K+I++PLPD +R L+++LL+SQK +L+ IV T GYS SDL V KDAA+GP+R+L G + VK +R I+ +DF A+ +RPSVS T+Q Sbjct: 9 PDDAIQK---IIEEAVAADKAGKYAEAVELYASGIEKMMAQMAELPNEEAKTQSRLKINEYMLRAEYIKDWMADQARTQQTQ--------------NTSVPSTQG------SNARATSGRQEQR---------------GGYSKQHAEHAHT----------------------------ILDEVLDHSPGVHWTDIAGLDVAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFIELDGAASSQEDRVLVMGATNLPQELDEAIVRRLEKRIYVPLPDPSSREGLIRHLLRSQKFSLSSRDFKLIVKVTEGYSGSDLKAVCKDAALGPIREL-GAKVANVKAEDVRGINASDFQVALTRVRPSVSSTTIQ 396
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|675205539|ref|XP_008911654.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566014616|gb|ETI37527.1| hypothetical protein, variant 3 [Phytophthora parasitica P1569] >gi|567952079|gb|ETK77760.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568010263|gb|ETL84453.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568040167|gb|ETM37629.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568088248|gb|ETN03110.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310]) HSP 1 Score: 339.347 bits (869), Expect = 5.523e-110 Identity = 165/275 (60.00%), Postives = 211/275 (76.73%), Query Frame = 0 Query: 210 VMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484 +++E+LD SPGV W I+GLE AK LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E FF+ISASSL SK++GEGEK+VRALF++AR QPSVVF+DEID++L R E++A+RR+K +F +LDGA + EDRILVMGATNLP LDEA++RRL K+I++PLPD +R L+++LL SQK +++ +IV T GYS SDL V KDAA+GP+R+L G + VK +R I+ +DF A+ +RPSVS T+Q Sbjct: 64 ILDEVLDHSPGVHWTDIAGLEIAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFSMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIREL-GARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQ 337
BLAST of EWM22441.1 vs. NCBI_GenBank
Match: gi|675205541|ref|XP_008911655.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|675205543|ref|XP_008911656.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|567952080|gb|ETK77761.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568088249|gb|ETN03111.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|568088250|gb|ETN03112.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310]) HSP 1 Score: 338.191 bits (866), Expect = 6.806e-110 Identity = 165/275 (60.00%), Postives = 211/275 (76.73%), Query Frame = 0 Query: 210 VMEEMLDRSPGVTWEQISGLEDAKHTLQEAVVLPNLRPDLFKGLRAPPRGVLLFGPPGTGKTLLAKAVASETGFAFFSISASSLVSKFLGEGEKMVRALFQVARREQPSVVFIDEIDSMLGQRKDQEHEATRRLKTEFLVQLDGAGTDNEDRILVMGATNLPWALDEAVLRRLPKKIFIPLPDTITRATLLKNLLQSQKHALTPDHLGEIVGRTAGYSCSDLAQVAKDAAMGPLRDLDGPVLRTVKENQLRPISMADFDHAIYAIRPSVSQGTVQ 484 +++E+LD SPGV W I+GLE AK LQEAV+LP LRPDLF GLRAPPRGVLLFGPPGTGKTLLAKAVA+E FF+ISASSL SK++GEGEK+VRALF++AR QPSVVF+DEID++L R E++A+RR+K +F +LDGA + EDRILVMGATNLP LDEA++RRL K+I++PLPD +R L+++LL SQK +++ +IV T GYS SDL V KDAA+GP+R+L G + VK +R I+ +DF A+ +RPSVS T+Q Sbjct: 42 ILDEVLDHSPGVHWTDIAGLEIAKQILQEAVILPTLRPDLFTGLRAPPRGVLLFGPPGTGKTLLAKAVATEAKATFFNISASSLTSKWVGEGEKLVRALFEMARELQPSVVFMDEIDALLSTRSASENDASRRIKNQFFTELDGAASSQEDRILVMGATNLPQELDEAIVRRLEKRIYVPLPDASSREGLIRHLLSSQKFSMSSRDFKQIVKATEGYSGSDLKAVCKDAALGPIREL-GARVANVKAEDVRGINASDFQVALTRVRPSVSSRTIQ 315 The following BLAST results are available for this feature:
BLAST of EWM22441.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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