EWM22503.1, cds8227 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22503.1 vs. NCBI_GenBank
Match: gi|585103009|gb|EWM22503.1| (tata element modulatory factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 1186.02 bits (3067), Expect = 0.000e+0 Identity = 589/589 (100.00%), Postives = 589/589 (100.00%), Query Frame = 0
Query: 1 MWSKLSSELLGKETQDALTDALQKGKQAWQSIEQSLDQAVDADTVVSKESTLPISIPYISTPEALDSPCADAVAKADPCLEEQIEYEGTTQNLSPQSCVTTCNLALAADNATEIGHVGIGNTLTAYDSPKSIDLALKSSRALANSMELKVKGERDDRGKDNISPAPIVATPTGDCDAEGDLEGSTHSGSCQAEKEARGLRLDTSTESNGAVESSCPEPNRSQSTTAPAGNGDRDIQSTASSPLELTLTPAISNFTSIATAVPADGFQREREHLQRELRESQGRVQALENEIRKAQAIYMSEEAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQDPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQLRYA 589
MWSKLSSELLGKETQDALTDALQKGKQAWQSIEQSLDQAVDADTVVSKESTLPISIPYISTPEALDSPCADAVAKADPCLEEQIEYEGTTQNLSPQSCVTTCNLALAADNATEIGHVGIGNTLTAYDSPKSIDLALKSSRALANSMELKVKGERDDRGKDNISPAPIVATPTGDCDAEGDLEGSTHSGSCQAEKEARGLRLDTSTESNGAVESSCPEPNRSQSTTAPAGNGDRDIQSTASSPLELTLTPAISNFTSIATAVPADGFQREREHLQRELRESQGRVQALENEIRKAQAIYMSEEAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQDPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQLRYA
Sbjct: 1 MWSKLSSELLGKETQDALTDALQKGKQAWQSIEQSLDQAVDADTVVSKESTLPISIPYISTPEALDSPCADAVAKADPCLEEQIEYEGTTQNLSPQSCVTTCNLALAADNATEIGHVGIGNTLTAYDSPKSIDLALKSSRALANSMELKVKGERDDRGKDNISPAPIVATPTGDCDAEGDLEGSTHSGSCQAEKEARGLRLDTSTESNGAVESSCPEPNRSQSTTAPAGNGDRDIQSTASSPLELTLTPAISNFTSIATAVPADGFQREREHLQRELRESQGRVQALENEIRKAQAIYMSEEAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQDPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQLRYA 589
BLAST of EWM22503.1 vs. NCBI_GenBank
Match: gi|298714558|emb|CBJ27549.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 165.622 bits (418), Expect = 1.865e-39 Identity = 104/255 (40.78%), Postives = 159/255 (62.35%), Query Frame = 0
Query: 302 EAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGV-KDLQDPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAE 555
E K + + A +EG LAFKQSEME+ VRK+R L+ V+ ER L + N + + LREQLRA + E+ QSL+A+ AV+++++ + + E+EL + +S++ +L K+W E KE+KR ++E+ A + + K L+D GKA + ++ ++ RE+ L QLQE L R EA RED + ++RRRW++AV R E + ++ HE+T PLLRQ+++LQEE R R A +AE +LTDRA AE
Sbjct: 801 EEKDKMLKAYMDEGAMLAFKQSEMEKTVRKARGALRGVQEERDSLAKENTTLQASLAGLREQLRAKDEERASQTQSLAAMGAVSQASSHRLNAAEKELEKLREALSAKKAALDKSWAETKELKRSLAELRAEKDALTKSLEDGGKARQATESQLQQ-WQDRESTLLLEQSQLQETLERVRREADHREDEAKDRQEDVRRRWKEAVGRAEALQAEAHESTAPLLRQVRSLQEEMRLRQEAVRAAEASLTDRAASAE 1054
BLAST of EWM22503.1 vs. NCBI_GenBank
Match: gi|695402104|ref|XP_009522937.1| (hypothetical protein PHYSODRAFT_489768, partial [Phytophthora sojae] >gi|348680404|gb|EGZ20220.1| hypothetical protein PHYSODRAFT_489768, partial [Phytophthora sojae]) HSP 1 Score: 112.079 bits (279), Expect = 2.466e-22 Identity = 98/292 (33.56%), Postives = 153/292 (52.40%), Query Frame = 0
Query: 295 QAIYMSEEAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQDPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQL 586
QA+ M+ K+ ++ AL +EG+AL+ KQ+++EQ +R R E ++E +LQ EA E+ L +L+ASE EK LAQ + + + K K EQE AQ Q E LQ + ++T S D + K ++ + + E+ E LQ T + LQ+ + EA RE+ R E+A+++R+WQDAV+R + + + EAT PLLRQI ALQE+ R R W + E L +R A R E E+L++ + L+ ++ED D++L
Sbjct: 285 QALQMALAEKEEKLSALLDEGQALSVKQAQLEQRLRALRKEKDELEERALKLQSQFEASAEEVKDLTTKLKASEEEKTRLAQENRQLASSTDTTTVKAEKAEQEAQEAQ----RQLEKLQT----------QVEQLTLEVSSKNDEIERLKTATQSNEAL--NHEKLE--LQQTLEFLQDNVRDLEQEAARREEMARAEIADLKRKWQDAVARVDMLGQSISEATQPLLRQIHALQEDQRARQETWKATESTLLERIDEATEQRRAVEQEKLDIEKELRELQRKLEDSDMEL 558
BLAST of EWM22503.1 vs. NCBI_GenBank
Match: gi|953503456|emb|CEG35466.1| (Transcription factor TMF, TATA element modulatory factor [Plasmopara halstedii]) HSP 1 Score: 102.449 bits (254), Expect = 4.485e-19 Identity = 90/283 (31.80%), Postives = 144/283 (50.88%), Query Frame = 0
Query: 304 KQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQDPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQL 586
K+ ++ AL +EG+ L+ KQ+ +EQ +R R E +VE+ +LQ E+ E L +L+ E EK LA + + K + EQE A+ ++ E+LQ E ++ E+T+ + L+ K+ S L + E+ E LQ T LQE++ +A RE+ R E+A+ +R+WQ+AV+R E + V EAT P LRQI LQEE R R +W + E AL R A R E E+ ++ +V R ++E+ +++L
Sbjct: 337 KEEKLSALLDEGQVLSVKQAHLEQRLRTLRKEKNEVEARVLKLQTQLESSIEETKDLSTKLKCCEKEKTRLASENQEFIGITDTMKIKLQRSEQEAKDAKCQV----ENLQSRIE------KLTREVTSKTDELDSLKTSIKS-SEAL-----NLEKEE--LQHTVLFLQESIRDLEQDAARREEMARAEIADFKRKWQEAVARVELLGLSVSEATQPFLRQIHDLQEEQRARQESWKATEAALLGRIEEANEQRRVTEQEKFDMEQQVNEFRVKVEENELEL 601
BLAST of EWM22503.1 vs. NCBI_GenBank
Match: gi|675167185|ref|XP_008892477.1| (hypothetical protein PPTG_02899 [Phytophthora parasitica INRA-310] >gi|568108665|gb|ETN23289.1| hypothetical protein PPTG_02899 [Phytophthora parasitica INRA-310]) HSP 1 Score: 100.908 bits (250), Expect = 1.664e-18 Identity = 90/296 (30.41%), Postives = 156/296 (52.70%), Query Frame = 0
Query: 294 AQAIYMSEEAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQ---DPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQL 586
QA+ M+ K+ ++ AL +EG+ L+ KQ+++EQ +R R E ++E +LQ E+ E+ L +L+ SE EK LAQ + + + + K K E++ +E + Q E+LQ ++ ++ E+++ ++ L+ +ALS ER E LQ T + LQ+ + EA RE+ R E A+++R+WQDA++R + + V EAT PLLRQI LQEE R R +W + E L + A R E E++EL + + L+ ++++ +++
Sbjct: 280 VQALQMALAEKEEKLSALLDEGQTLSVKQAQLEQRLRTLRKEKDELEERTLKLQSQCESSSEEVKDLSSKLKVSEEEKARLAQENRQLMSSADTTSAKVEKAERQA----LEATQQLEALQT------QVNQLTQEVSSKNEEIERLKSASQSNEALS---------VEREE--LQHTIQFLQDNIRDLEKEAARREEMARAENADLKRKWQDAMARVDMLGQSVSEATQPLLRQIHTLQEEQRARQESWKATESTLLAQIEEATEQHRVVEQEKMELEQKFQELQRQVDERELEF 554
BLAST of EWM22503.1 vs. NCBI_GenBank
Match: gi|567963664|gb|ETK89157.1| (hypothetical protein L915_06683 [Phytophthora parasitica] >gi|567992375|gb|ETL42567.1| hypothetical protein L916_06622 [Phytophthora parasitica] >gi|570953809|gb|ETP19066.1| hypothetical protein F441_06817 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 100.908 bits (250), Expect = 1.664e-18 Identity = 90/296 (30.41%), Postives = 156/296 (52.70%), Query Frame = 0
Query: 294 AQAIYMSEEAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQ---DPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQL 586
QA+ M+ K+ ++ AL +EG+ L+ KQ+++EQ +R R E ++E +LQ E+ E+ L +L+ SE EK LAQ + + + + K K E++ +E + Q E+LQ ++ ++ E+++ ++ L+ +ALS ER E LQ T + LQ+ + EA RE+ R E A+++R+WQDA++R + + V EAT PLLRQI LQEE R R +W + E L + A R E E++EL + + L+ ++++ +++
Sbjct: 280 VQALQMALAEKEEKLSALLDEGQTLSVKQAQLEQRLRTLRKEKDELEERTLKLQSQCESSSEEVKDLSSKLKVSEEEKARLAQENRQLMSSADTTSAKVEKAERQA----LEATQQLEALQT------QVNQLTQEVSSKNEEIERLKSASQSNEALS---------VEREE--LQHTIQFLQDNIRDLEKEAARREEMARAENADLKRKWQDAMARVDMLGQSVSEATQPLLRQIHTLQEEQRARQESWKATESTLLAQIEEATEQHRVVEQEKMELEQKFQELQRQVDERELEF 554
BLAST of EWM22503.1 vs. NCBI_GenBank
Match: gi|566026355|gb|ETI49266.1| (hypothetical protein F443_06813 [Phytophthora parasitica P1569] >gi|568021652|gb|ETL95737.1| hypothetical protein L917_06493 [Phytophthora parasitica] >gi|568052037|gb|ETM48923.1| hypothetical protein L914_06597 [Phytophthora parasitica] >gi|570988673|gb|ETP47011.1| hypothetical protein F442_06849 [Phytophthora parasitica P10297]) HSP 1 Score: 100.908 bits (250), Expect = 1.664e-18 Identity = 90/296 (30.41%), Postives = 156/296 (52.70%), Query Frame = 0
Query: 294 AQAIYMSEEAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQ---DPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQL 586
QA+ M+ K+ ++ AL +EG+ L+ KQ+++EQ +R R E ++E +LQ E+ E+ L +L+ SE EK LAQ + + + + K K E++ +E + Q E+LQ ++ ++ E+++ ++ L+ +ALS ER E LQ T + LQ+ + EA RE+ R E A+++R+WQDA++R + + V EAT PLLRQI LQEE R R +W + E L + A R E E++EL + + L+ ++++ +++
Sbjct: 280 VQALQMALAEKEEKLSALLDEGQTLSVKQAQLEQRLRTLRKEKDELEERTLKLQSQCESSSEEVKDLSSKLKVSEEEKARLAQENRQLMSSADTTSAKVEKAERQA----LEATQQLEALQT------QVNQLTQEVSSKNEEIERLKSASQSNEALS---------VEREE--LQHTIQFLQDNIRDLEKEAARREEMARAENADLKRKWQDAMARVDMLGQSVSEATQPLLRQIHTLQEEQRARQESWKATESTLLAQIEEATEQHRVVEQEKMELEQKFQELQRQVDERELEF 554
BLAST of EWM22503.1 vs. NCBI_GenBank
Match: gi|570330047|gb|ETO77995.1| (hypothetical protein F444_06883 [Phytophthora parasitica P1976]) HSP 1 Score: 100.908 bits (250), Expect = 1.724e-18 Identity = 90/296 (30.41%), Postives = 156/296 (52.70%), Query Frame = 0
Query: 294 AQAIYMSEEAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQ---DPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQL 586
QA+ M+ K+ ++ AL +EG+ L+ KQ+++EQ +R R E ++E +LQ E+ E+ L +L+ SE EK LAQ + + + + K K E++ +E + Q E+LQ ++ ++ E+++ ++ L+ +ALS ER E LQ T + LQ+ + EA RE+ R E A+++R+WQDA++R + + V EAT PLLRQI LQEE R R +W + E L + A R E E++EL + + L+ ++++ +++
Sbjct: 280 VQALQMALAEKEEKLSALLDEGQTLSVKQAQLEQRLRTLRKEKDELEERTLKLQSQCESSSEEVKDLSSKLKVSEEEKARLAQENRQLMSSADTTSAKVEKAERQA----LEATQQLEALQT------QVNQLTQEVSSKNEEIERLKSASQSNEALS---------VEREE--LQHTIQFLQDNIRDLEKEAARREEMARAENADLKRKWQDAMARVDMLGQSVSEATQPLLRQIHTLQEEQRARQESWKATESTLLAQIEEATEQHRVVEQEKMELEQKFQELQRQVDERELEF 554
BLAST of EWM22503.1 vs. NCBI_GenBank
Match: gi|970634565|gb|KUF79747.1| (Golgin candidate 5 [Phytophthora nicotianae]) HSP 1 Score: 100.523 bits (249), Expect = 2.007e-18 Identity = 90/296 (30.41%), Postives = 156/296 (52.70%), Query Frame = 0
Query: 294 AQAIYMSEEAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQ---DPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQL 586
QA+ M+ K+ ++ AL +EG+ L+ KQ+++EQ +R R E ++E +LQ E+ E+ L +L+ SE EK LAQ + + + + K K E++ +E + Q E+LQ ++ ++ E+++ ++ L+ +ALS ER E LQ T + LQ+ + EA RE+ R E A+++R+WQDA++R + + V EAT PLLRQI LQEE R R +W + E L + A R E E++EL + + L+ ++++ +++
Sbjct: 243 VQALQMALAEKEEKLSALLDEGQTLSVKQAQLEQRLRTLRKEKDELEERTLKLQSQCESSSEEVKDLSSKLKVSEEEKARLAQENRQLMSSADTTSAKVEKAERQA----LEATQQLEALQT------QVNQLTQEVSSKNEEIERLKSASQSNEALS---------VEREE--LQHTIQFLQDNIRDLEKEAARREEMARAENADLKRKWQDAMARVDMLGQSVSEATQPLLRQIHTLQEEQRARQESWKATESTLLAQIEEATEQHRVVEQEKMELEQKFQELQRQVDERELEF 517
BLAST of EWM22503.1 vs. NCBI_GenBank
Match: gi|1214682761|gb|OWZ00924.1| (hypothetical protein PHMEG_00027783 [Phytophthora megakarya]) HSP 1 Score: 97.0561 bits (240), Expect = 2.400e-17 Identity = 91/293 (31.06%), Postives = 154/293 (52.56%), Query Frame = 0
Query: 294 AQAIYMSEEAKQRQIHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTASESGVKDLQDPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAEGLARTAEAERLELGGRVEGLRTRIEDLDVQL 586
QA+ M+ K+ ++ AL +EG+AL+ KQ+++EQ +R R E ++E + Q EA E+ L +L+ SE EKN LA+ + S + K E+E A + Q E +Q +M+ + +T+ + ++ L KA ++ + + E+ E LQ T + LQ+ + EA RE+ R E+A+++R+WQ AV+R + + V EAT PLLRQI ALQE+ R R W + E L R A R E E+L++ ++ L+ R+++ +++
Sbjct: 279 VQALQMALAEKEEKLSALLDEGQALSVKQAQLEQRLRTLRKEKDELEERGLKSQSQFEASAEEVKNLSSKLKTSEEEKNRLAKENQKLMTSANSTSSSAEKAEREAREA----TQQLEKIQV------KMQELTLIVTSKDEEIEKL----KAATQSNEAL--NLEKAE--LQQTLQFLQDNVRDLEQEAARREEMARAEIADLKRKWQGAVARVDMLGQSVSEATQPLLRQIHALQEDQRARQENWKTTESTLVTRVDEATEQRRAIEQEKLDMEQQLRELQRRMDNNELEF 553 The following BLAST results are available for this feature:
BLAST of EWM22503.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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