EWM22430.1, cds8217 (CDS) Nannochloropsis gaditana

Overview
NameEWM22430.1
Unique Namecds8217
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:160834..160851 -
Alignment locationKK037248.1:160444..160767 -
Alignment locationKK037248.1:159128..160345 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22430.1
Producttranslation initiation factor eif-2b subunit delta isoform 1
Orig transcript idgnl|cribi|Naga_100011g52.3430.mrna
GeneEIF2Bdelta
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:160834..160851 -
KK037248.1supercontigKK037248.1:160444..160767 -
KK037248.1supercontigKK037248.1:159128..160345 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR000649IF-2B-related
IPR027363M1Pi_N
Homology
BLAST of EWM22430.1 vs. NCBI_GenBank
Match: gi|585102936|gb|EWM22430.1| (translation initiation factor eif-2b subunit delta isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 1059.28 bits (2738), Expect = 0.000e+0
Identity = 519/519 (100.00%), Postives = 519/519 (100.00%), Query Frame = 0
Query:    1 MGDDELSTSLSEMSLTGSRSLGGIGDDRPGSALSSSPASPGFVGKGTLRPKHKQQQSGASPTRVRKSSSPKSGKGGGGKASGGVKEDRNRGRDVSSGTTTSRNTPGGSSRCESERTQGHISAGAKRQGPQSHRGARAESEDWGRHQAPSKMIHLFSHLPQYSKRSTQSKSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKKFRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELLRPAGGPGVTRQMEQAHSLQKDKPGIAASELTASLPQRLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKDDVNVNFEF 519
            MGDDELSTSLSEMSLTGSRSLGGIGDDRPGSALSSSPASPGFVGKGTLRPKHKQQQSGASPTRVRKSSSPKSGKGGGGKASGGVKEDRNRGRDVSSGTTTSRNTPGGSSRCESERTQGHISAGAKRQGPQSHRGARAESEDWGRHQAPSKMIHLFSHLPQYSKRSTQSKSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKKFRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELLRPAGGPGVTRQMEQAHSLQKDKPGIAASELTASLPQRLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKDDVNVNFEF
Sbjct:    1 MGDDELSTSLSEMSLTGSRSLGGIGDDRPGSALSSSPASPGFVGKGTLRPKHKQQQSGASPTRVRKSSSPKSGKGGGGKASGGVKEDRNRGRDVSSGTTTSRNTPGGSSRCESERTQGHISAGAKRQGPQSHRGARAESEDWGRHQAPSKMIHLFSHLPQYSKRSTQSKSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKKFRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELLRPAGGPGVTRQMEQAHSLQKDKPGIAASELTASLPQRLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKDDVNVNFEF 519          
BLAST of EWM22430.1 vs. NCBI_GenBank
Match: gi|698776430|ref|XP_009821259.1| (hypothetical protein H257_00335 [Aphanomyces astaci] >gi|574123384|gb|ETV88859.1| hypothetical protein H257_00335 [Aphanomyces astaci])

HSP 1 Score: 386.341 bits (991), Expect = 6.005e-126
Identity = 189/378 (50.00%), Postives = 260/378 (68.78%), Query Frame = 0
Query:  144 RHQAPSKMIHLFSHLPQYSKRSTQS------KSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKKFRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELLRPAGGPGVTRQMEQAHSLQKDKPGIAASELTAS----LPQRLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKD 511
            R QA  K + LFSHLPQ+ + S+ S      K+++HPAI +LGL YA+G + G NAR  AML AF++V+++Y  PP +VLR DLDK L+P IQ+LI+CRPHSI MGNAI+++R  I +LDP  G  +AK  +++ ID Y+E RI  A   +++   +KI DGDV+L Y R+  +E+ L +A  Q  +FRVLVVDSRP  EG++L+ +L+   +P TY+ +NA+SYVM+ V+KV LG  A++SNGAV++R GTA+ AM A  FN+P +FCCETYKFSD+VQLDSI  NE+ DP EL+               H    ++P   AS    +    LP  LKLLN+ YDLTPM+YVS+V+TE+GMIPPTS+P ++RE  K+
Sbjct:  127 RTQA-QKQVALFSHLPQFERESSLSLNVGFSKAEIHPAILSLGLKYAEGKLVGGNARCVAMLTAFQQVIKDYHTPPDKVLRRDLDKTLRPLIQFLIDCRPHSIGMGNAIRYVRNVIATLDPSKGDDDAKTFVLDEIDQYIENRIVMAMTAVSKFACSKIVDGDVILTYARADIIEVLLKQAFDQKIQFRVLVVDSRPHFEGKKLIRALAEHGLPCTYIQINALSYVMKEVTKVFLGATAIMSNGAVVARVGTALCAMTAHEFNVPVLFCCETYKFSDRVQLDSITHNELRDPDELVNSYAAD---------HQRLTNRPEAEASAHVLADWRDLPN-LKLLNLVYDLTPMEYVSMVVTEIGMIPPTSIPAIIREYRKE 493          
BLAST of EWM22430.1 vs. NCBI_GenBank
Match: gi|669140102|ref|XP_008605619.1| (hypothetical protein SDRG_01846 [Saprolegnia diclina VS20] >gi|530742533|gb|EQC40775.1| hypothetical protein SDRG_01846 [Saprolegnia diclina VS20])

HSP 1 Score: 382.489 bits (981), Expect = 3.603e-124
Identity = 188/378 (49.74%), Postives = 261/378 (69.05%), Query Frame = 0
Query:  144 RHQAPSKMIHLFSHLPQYSKRSTQS------KSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKKFRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELLRPAGGPGVTRQMEQAHSLQ-KDKPGIAASELTASLPQRLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKDDVN 514
            R QA  K + LFSHLPQY + S+ S      K+++HPAI +LGL YA+G + G NAR  AML AF+EV+++Y  PP + LR DLDK+L+P IQ+LI+CRPHSI MGNAI+++R  I ++D      EAKE I++ ID +++ RI  A K + +++ +KI DGDV+L Y RS  +E  L  A     KFRV+VVDSRP  EG++LL +L+   +P +Y+++NA+SYVM+ V+KV LG +A +SNGA ++R GTA+ AM A  FN+P +FCCETYKFSD+VQ+DSI  NE+ DP EL+          ++ +  S Q +D P + A      LP  LKLLN+ YDLTPM+YV+ V+TE+GMIPPTS+P ++RE  K+  N
Sbjct:  139 RTQA-QKQVTLFSHLPQYERESSLSLNVGFSKTEIHPAILSLGLKYAEGKIAGGNARCIAMLTAFQEVIKDYHAPPDKGLRRDLDKSLRPLIQFLIDCRPHSIGMGNAIRYVRNVIATIDVTKNDEEAKELIIDEIDQFIQHRILLAMKAVTKLSCSKIVDGDVILTYARSEVLESLLKEAHDLKTKFRVIVVDSRPHFEGKKLLRALATHGLPCSYIHINALSYVMKQVTKVFLGASAFMSNGAAVARVGTALCAMTAHEFNVPVLFCCETYKFSDRVQMDSITHNELRDPDELISSYATETNADRLNRPKSQQAEDHPHVLAD--WRDLPN-LKLLNLIYDLTPMEYVTTVVTEIGMIPPTSIPAIIREYRKETSN 512          
BLAST of EWM22430.1 vs. NCBI_GenBank
Match: gi|673017634|ref|XP_008862778.1| (hypothetical protein H310_01451 [Aphanomyces invadans] >gi|574481981|gb|ETW08973.1| hypothetical protein H310_01451 [Aphanomyces invadans])

HSP 1 Score: 379.793 bits (974), Expect = 2.219e-123
Identity = 189/385 (49.09%), Postives = 258/385 (67.01%), Query Frame = 0
Query:  144 RHQAPSKMIHLFSHLPQYSKRSTQS------KSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVE------ERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKKFRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELLRPAGGPGVTRQMEQAHSLQKDKPGIAASELTASLPQ--RLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKDDVN 514
            R QA  K + LFSHLPQ+ + S+ S      K+++HPAI +LGL YA+G + G NAR  AML AFK+V+++Y  P  +VLR DLDK L+P IQ+LI+CRPHSI MGNAI+++R  I +LDP  G  +AK  +++ ID Y++       RI  A   +A+    KI DGDV+L Y R+  +E+ L +A     KFRVLVVDSRP  EG++L+ +L+   +P  YL +NA+SYVM+ V+KV LG  A++SNGA ++R GTA+ AM A+ FN+P +FCCETYKFSD+VQLDSI  NE+ DP EL+        T      H L + K   ++S + A       LKLLN+ YDLTPM+YVS+V+TE+GMIPPTS+P ++RE  K+  N
Sbjct:  115 RTQA-QKQVALFSHLPQFERESSLSLNVGFSKAEIHPAILSLGLKYAEGKLAGGNARCVAMLTAFKQVIKDYHAPADKVLRRDLDKTLRPLIQFLIDCRPHSIGMGNAIRYVRNVIATLDPSKGDDDAKSFVLDEIDQYIQASLSNRNRILMAMTAVAKYACTKIVDGDVILTYARADIIEVLLKQAYDGKTKFRVLVVDSRPHFEGKKLVRALAEHGVPCAYLQINALSYVMKEVTKVFLGATAIMSNGAAVARVGTALCAMTAQEFNVPVLFCCETYKFSDRVQLDSITHNELRDPDELVNSYATDTTT------HRLNRPKAEASSSHVLADWRDLSNLKLLNLVYDLTPMEYVSMVVTEIGMIPPTSIPAIIREYRKETNN 492          
BLAST of EWM22430.1 vs. NCBI_GenBank
Match: gi|1173941228|gb|OQR90445.1| (translation initiation factor eIF-2B subunit delta [Achlya hypogyna])

HSP 1 Score: 376.326 bits (965), Expect = 9.225e-122
Identity = 181/369 (49.05%), Postives = 256/369 (69.38%), Query Frame = 0
Query:  150 KMIHLFSHLPQYSKRSTQS------KSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKKFRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELLRPAGGPGVTRQMEQAHSLQKD-KPGIAASELTASLPQRLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKD 511
            K + LFSHLPQY + S+ S      K+++HPAI +LGL YA+G + G NAR  AML AFK+V+++Y  PP + LR DLDK+L+P IQ+LI+CRPHSI MGNAI+++R  I ++D      EAKE I++ ID +++ RI  A K +++++ +KI  GDV+L Y RS  +E  L  A      FRV+VVDSRP  EG++L+ SL+   +P +Y+++NA+SYVM+ V+KV LG +A +SNGA ++R GTA+ AM A  FN+P +FCCETYKFSD+VQ+DSI  NE+ DP EL+          ++ +  S Q + +P + A      LP  LKLLN+ YDLTPM+YV+ V+TE+GMIPPTS+P ++RE  K+
Sbjct:  144 KQVTLFSHLPQYERESSLSLNVGFSKTEIHPAILSLGLKYAEGKIAGGNARCIAMLTAFKQVIKDYHAPPDKGLRRDLDKSLRPLIQFLIDCRPHSIGMGNAIRYVRNIIATIDVTKNDEEAKELIIDEIDQFIQHRILLAMKAVSKLSCSKIVYGDVILTYARSEVIESLLKEAHDSKTNFRVIVVDSRPHFEGKKLIRSLATHGLPCSYIHINALSYVMKQVTKVFLGASAFMSNGAAVARVGTALCAMTAHEFNVPVLFCCETYKFSDRVQMDSITHNELRDPDELISSYATETNADRLNRPKSQQAEVQPHVLAD--WRDLPN-LKLLNLIYDLTPMEYVTTVVTEIGMIPPTSIPAIIREYRKE 509          
BLAST of EWM22430.1 vs. NCBI_GenBank
Match: gi|298706469|emb|CBJ29456.1| (eukaryotic translation initiation factor 2B delta subunit [Ectocarpus siliculosus])

HSP 1 Score: 355.525 bits (911), Expect = 4.960e-116
Identity = 190/360 (52.78%), Postives = 242/360 (67.22%), Query Frame = 0
Query:  154 LFSHLPQY-SKRSTQSKSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKK--FRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELLRPAGGPGVTRQMEQAHSLQKDKPGIAASELTASLPQRLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSK 510
            +FSHL Q        SK D+HPAI  LG  Y+ G V G+ AR  AML+AFK+VV +Y  PP ++L  DLDK L+P +QYLI+CRPHS++MGNA K LR  I    P     EAK SIV+ I  ++  RIT AA  +A+    KI DGDV+L YGRS  VE ++L A  Q K+  FRV++VDSRP +EGR+L  +LS   IP TY+ L A+SY+MR V+KV +G +AM+SNGAV+SR GTAVVAM+AR  N+P +FCCETYKF ++VQLDSI +NE+G P +L+  A G  V                    E  A LP  LKLLN+RYDLTP+KYV+LVITE G +PPTSVPVL+RE ++
Sbjct:    1 MFSHLEQNRGVLPLTSKGDIHPAILALGRKYSSGEVTGATARAVAMLMAFKQVVMDYSTPPDKMLSWDLDKRLRPMMQYLIDCRPHSVSMGNAHKALRNIIAKSPPSLPEEEAKASIVDKIKEFINTRITLAANEIAKNAITKIRDGDVILTYGRSSLVE-SVLVAAQQAKRGSFRVIIVDSRPGVEGRQLSETLSAEGIPCTYVLLTAISYIMREVTKVFIGASAMMSNGAVLSRVGTAVVAMMARSHNLPIMFCCETYKFCERVQLDSIVYNELGQPDDLISDASGGDV-------------------DEFKA-LPS-LKLLNLRYDLTPIKYVTLVITEFGFLPPTSVPVLIREMTR 338          
BLAST of EWM22430.1 vs. NCBI_GenBank
Match: gi|301101431|ref|XP_002899804.1| (translation initiation factor eIF-2B subunit delta, putative [Phytophthora infestans T30-4] >gi|262102806|gb|EEY60858.1| translation initiation factor eIF-2B subunit delta, putative [Phytophthora infestans T30-4])

HSP 1 Score: 349.362 bits (895), Expect = 5.361e-111
Identity = 183/394 (46.45%), Postives = 249/394 (63.20%), Query Frame = 0
Query:  144 RHQAPSKMIHLFSHLPQYSKRSTQS-------KSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKK----FRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELL-----------RPAGGPGVTRQMEQAHSLQKDKPGIAASELTASLPQ--RLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKDDV 513
            R QA  K + +FSHLPQY + S+ S       K ++H A+  LGL YA+G + G NAR  AM+ AF++V+ +Y  PP + LR DLDK L+P IQYLI+CRPH I MGNAI+ LR  I S  PE    EAK  I E +D YV+ R+  A++ + +   +KI  GDV+L Y R+  VE  LL   A   +     RV+VVDSRP  EGR+++ +L+ A +  +YL +NA+SY+MR V+KV LG AA +SNG  ++R GTA+VAM A   N+P +FCCETYKFSD+VQLD+I  NE+GDP EL+           R  GG      +           G+++S + +       LKLLN+ YD+TP+ YVS+V+TE+GMIPPTS+P +LRE S+D V
Sbjct:  152 RTQA-QKQVEMFSHLPQYERESSLSLNVGFSNKEEVHAAVLALGLKYAEGKISGGNARCIAMITAFQQVIDDYVTPPDKQLRRDLDKRLRPLIQYLIDCRPHGIGMGNAIRRLRRVIGSTPPELSDEEAKRRIREEMDDYVQSRVLLASRAVVKNAQSKIRKGDVILTYARANVVEELLLETAASSPEVAATLRVIVVDSRPHFEGRKMVGALASAGLQCSYLQINALSYIMREVTKVFLGAAAFMSNGVAVARVGTALVAMTAHEANVPVLFCCETYKFSDRVQLDAITHNELGDPDELVSSYCIDKLHARRRTGGSAAGNAIS----------GVSSSHVLSDWRDLADLKLLNLVYDVTPIDYVSMVVTELGMIPPTSIPAVLREYSRDGV 534          
BLAST of EWM22430.1 vs. NCBI_GenBank
Match: gi|675190559|ref|XP_008904164.1| (hypothetical protein PPTG_10539 [Phytophthora parasitica INRA-310] >gi|566025518|gb|ETI48429.1| hypothetical protein F443_07541 [Phytophthora parasitica P1569] >gi|567962873|gb|ETK88386.1| hypothetical protein L915_07360 [Phytophthora parasitica] >gi|567991581|gb|ETL41784.1| hypothetical protein L916_07305 [Phytophthora parasitica] >gi|568020824|gb|ETL94941.1| hypothetical protein L917_07195 [Phytophthora parasitica] >gi|568051270|gb|ETM48178.1| hypothetical protein L914_07253 [Phytophthora parasitica] >gi|568095641|gb|ETN10403.1| hypothetical protein PPTG_10539 [Phytophthora parasitica INRA-310] >gi|570952981|gb|ETP18238.1| hypothetical protein F441_07518 [Phytophthora parasitica CJ01A1] >gi|970663708|gb|KUG00807.1| Translation initiation factor eIF-2B subunit delta [Phytophthora nicotianae])

HSP 1 Score: 347.436 bits (890), Expect = 2.821e-110
Identity = 182/390 (46.67%), Postives = 251/390 (64.36%), Query Frame = 0
Query:  144 RHQAPSKMIHLFSHLPQYSKRSTQS-------KSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKK----FRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELLRPAGGPGVTRQMEQAHSLQKDKPGIAASELTASLPQ---------RLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKDDV 513
            R QA  K + +FSHLPQY + S+ S       K ++H A+  LGL YA+G + G NAR  AM+ AF++V+ +Y  P  + LR DLDK L+P IQYLI+CRPH I MGNAI+ LR  I S  PE    EAK  I E +D YV+ RI  A++ + +   +KIS+GDV+L Y R+  VE  LL       +     R++VVDSRP  EGR+++++L+ A +  TYL +NA+SY+MR V+KV LG AA +SNG  ++R GTA+VAM A   N+P +FCCETYKFSD+VQLD+I  NE+GDP EL+        +  +++ HS ++    +  +   AS             LKLLN+ YD+TP+ YVS+V+TE+GMIPPTS+P +LRE S+D V
Sbjct:  152 RTQA-QKQVEMFSHLPQYERESSLSLNVGFSNKEEVHSAVLALGLKYAEGKISGGNARCIAMITAFQQVIDDYVTPQDKQLRRDLDKRLRPLIQYLIDCRPHGIGMGNAIRRLRRVIGSTPPELSEEEAKRRIREEMDDYVQSRILLASRAVVKNAQSKISEGDVILTYARANVVEELLLETAKTSPEIAASLRIIVVDSRPHYEGRKMVSALASAGLQCTYLQINALSYIMREVTKVFLGAAAFMSNGVAVARVGTALVAMTAHEANVPVLFCCETYKFSDRVQLDAITHNELGDPDELVS-------SYCIDKPHSRRRTGGSVGNASSGASSGHILSDWRDLADLKLLNLVYDVTPIDYVSMVVTELGMIPPTSIPAVLREYSRDGV 533          
BLAST of EWM22430.1 vs. NCBI_GenBank
Match: gi|953490244|emb|CEG46670.1| (translation initiation factor eif-2b subunit delta-like [Plasmopara halstedii])

HSP 1 Score: 346.28 bits (887), Expect = 5.903e-110
Identity = 185/388 (47.68%), Postives = 247/388 (63.66%), Query Frame = 0
Query:  144 RHQAPSKMIHLFSHLPQYSKRSTQS-------KSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLR----AKAQGKKFRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELL-------RPAGGPGVTRQMEQAHSLQKDKPGIAASELTASLPQRLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKDDV 513
            R QA  K + +F+HLPQY + S+ S       K D+H A+  LGL YA+G + GSNAR  AM+ AF +V+ +Y  PP   LR DLDK L+P IQYLI+CRP +I MGNAI+ LR  I S  PE    EAK  I + +D YV+ RI  A++ + ++  +K++ GDV+L Y R+  VE  LL     A       RV+VVDSRP  EGR+L+ SL+ A +  +YL +NA+SY+MR V+KV LG +A +SNG  ++RAGTA+VAM A   N+P +FCCETYKFSD+VQLD+I  NE+GDP +L+       R   G  VT      H L   +  +            LKLLN+ YD+TP+ YVS+VITEVGMIPPTS+P ++RE S+D V
Sbjct:  151 RTQA-QKQVEMFAHLPQYERESSLSLNVGFSTKEDIHAAVLALGLKYAEGRISGSNARCIAMITAFDQVIDDYVTPPESQLRRDLDKRLRPLIQYLIDCRPLNIGMGNAIRRLRRVIGSTPPELSEEEAKRRIRDEMDDYVQSRILLASRAVVKIAQSKLNPGDVILTYARANVVEELLLETAKTAPETAATLRVIVVDSRPHYEGRKLVGSLAGAGLQCSYLQINALSYIMREVTKVFLGASAFMSNGVAVARAGTALVAMTAHEANVPVLFCCETYKFSDRVQLDAITHNELGDPDDLVSSYCIDKRRRTGRNVT---SSGHILSDWRDLVD-----------LKLLNLVYDVTPIDYVSMVITEVGMIPPTSIPAIMREYSRDGV 523          
BLAST of EWM22430.1 vs. NCBI_GenBank
Match: gi|570329276|gb|ETO77224.1| (hypothetical protein F444_07550 [Phytophthora parasitica P1976])

HSP 1 Score: 346.665 bits (888), Expect = 6.394e-110
Identity = 182/390 (46.67%), Postives = 250/390 (64.10%), Query Frame = 0
Query:  144 RHQAPSKMIHLFSHLPQYSKRSTQS-------KSDLHPAIETLGLLYADGSVRGSNARTAAMLLAFKEVVREYQLPPGEVLRLDLDKALKPHIQYLINCRPHSIAMGNAIKWLRGRIHSLDPEAGPAEAKESIVEAIDAYVEERITFAAKTLAEVTANKISDGDVVLVYGRSYSVELTLLRAKAQGKK----FRVLVVDSRPLLEGRRLLASLSRANIPSTYLNLNAVSYVMRGVSKVLLGVAAMLSNGAVISRAGTAVVAMLARRFNIPAIFCCETYKFSDKVQLDSICWNEVGDPAELLRPAGGPGVTRQMEQAHSLQKDKPGIAASELTASLPQ---------RLKLLNIRYDLTPMKYVSLVITEVGMIPPTSVPVLLRESSKDDV 513
            R QA  K + +FSHLPQY + S+ S       K ++H A+  LGL YA+G + G NAR  AM+ AF++V+ +Y  P  + LR DLDK L+P IQYLI+CRPH I MGNAI+ LR  I S  PE    EAK  I E +D YV+ RI  A++ + +   +KIS+GDV+L Y R+  VE  LL       +     R++VVDSRP  EGR++ ++L+ A +  TYL +NA+SY+MR V+KV LG AA +SNG  ++R GTA+VAM A   N+P +FCCETYKFSD+VQLD+I  NE+GDP EL+        +  +++ HS ++    +  +   AS             LKLLN+ YD+TP+ YVS+V+TE+GMIPPTS+P +LRE S+D V
Sbjct:  152 RTQA-QKQVEMFSHLPQYERESSLSLNVGFSNKEEVHSAVLALGLKYAEGKISGGNARCIAMITAFQQVIDDYVTPQDKQLRRDLDKRLRPLIQYLIDCRPHGIGMGNAIRRLRRVIGSTPPELSEEEAKRRIREEMDDYVQSRILLASRAVVKNAQSKISEGDVILTYARANVVEELLLETAKTSPEIAASLRIIVVDSRPHYEGRKMASALASAGLQCTYLQINALSYIMREVTKVFLGAAAFMSNGVAVARVGTALVAMTAHEANVPVLFCCETYKFSDRVQLDAITHNELGDPDELVS-------SYCIDKPHSRRRTGGSVGNASSGASSGHILSDWRDLADLKLLNLVYDVTPIDYVSMVVTELGMIPPTSIPAVLREYSRDGV 533          
The following BLAST results are available for this feature:
BLAST of EWM22430.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102936|gb|EWM22430.1|0.000e+0100.00translation initiation factor eif-2b subunit delta... [more]
gi|698776430|ref|XP_009821259.1|6.005e-12650.00hypothetical protein H257_00335 [Aphanomyces astac... [more]
gi|669140102|ref|XP_008605619.1|3.603e-12449.74hypothetical protein SDRG_01846 [Saprolegnia dicli... [more]
gi|673017634|ref|XP_008862778.1|2.219e-12349.09hypothetical protein H310_01451 [Aphanomyces invad... [more]
gi|1173941228|gb|OQR90445.1|9.225e-12249.05translation initiation factor eIF-2B subunit delta... [more]
gi|298706469|emb|CBJ29456.1|4.960e-11652.78eukaryotic translation initiation factor 2B delta ... [more]
gi|301101431|ref|XP_002899804.1|5.361e-11146.45translation initiation factor eIF-2B subunit delta... [more]
gi|675190559|ref|XP_008904164.1|2.821e-11046.67hypothetical protein PPTG_10539 [Phytophthora para... [more]
gi|953490244|emb|CEG46670.1|5.903e-11047.68translation initiation factor eif-2b subunit delta... [more]
gi|570329276|gb|ETO77224.1|6.394e-11046.67hypothetical protein F444_07550 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8241rna8241Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications