EWM22455.1, cds8186 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM22455.1
Unique Name	cds8186
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	KK037248.1:93819..94474 +
Alignment location	KK037248.1:94613..95264 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM22455.1
Product	26s protease regulatory subunit 8
Orig transcript id	gnl\|cribi\|Naga_100011g23.3455.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KK037248.1	supercontig	KK037248.1:93819..94474 +
KK037248.1	supercontig	KK037248.1:94613..95264 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Biological Process**
Term	Definition
GO:0009056	catabolic process
GO:0019538	protein metabolic process
GO:0030163	protein catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0016787	hydrolase activity
GO:0005524	ATP binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR003960	ATPase_AAA_CS
IPR005937	26S_Psome_P45
IPR003959	ATPase_AAA_core
IPR027417	P-loop_NTPase
IPR003593	AAA+_ATPase

Homology

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BLAST of EWM22455.1 vs. NCBI_GenBank
Match: gi|585102961|gb|EWM22455.1| (26s protease regulatory subunit 8 [Nannochloropsis gaditana])

HSP 1 Score: 896.345 bits (2315), Expect = 0.000e+0
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0

Query:    1 MSVSGPLHIPFRRELSNCAYLRGGTDMATAKVMSSRPTGPTTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435
            MSVSGPLHIPFRRELSNCAYLRGGTDMATAKVMSSRPTGPTTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK
Sbjct:    1 MSVSGPLHIPFRRELSNCAYLRGGTDMATAKVMSSRPTGPTTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435

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BLAST of EWM22455.1 vs. NCBI_GenBank
Match: gi|299472009|emb|CBN80092.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 743.421 bits (1918), Expect = 0.000e+0
Identity = 356/395 (90.13%), Postives = 377/395 (95.44%), Query Frame = 0

Query:   41 TTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435
             +SG D GV SYY  KIDE+E+VVR+RTQNL+RLKAQRNE NAKVRLLREELHHLQE GSYVGEVVKAMGK KVLVKVNPEGKYVVD+DKD+D+ KCTPNTRVALRNDSY LHKILPTKVDPLVSLMKVE VPDSTYDMIGGL+KQ+REIKEVIELPIKHPELFE+LGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG+ELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRV+GSEGGDSEVQRTMLELLNQLDGFEP QNIKVVMATNRIDILD ALLRPGRIDRKIEFPHPT+ SR+DI+ IHSRKMNL+RGI+LK IAEK+P+ASGAECKAVCTEAGMFALRERRIHVTQEDFEM+VAKVMKKDSD NMSIRKLWK
Sbjct:    4 ASSGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLEKQIREIKEVIELPIKHPELFESLGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVEGSEGGDSEVQRTMLELLNQLDGFEPTQNIKVVMATNRIDILDPALLRPGRIDRKIEFPHPTLTSRMDIMGIHSRKMNLLRGIDLKVIAEKMPSASGAECKAVCTEAGMFALRERRIHVTQEDFEMSVAKVMKKDSDMNMSIRKLWK 398

[Close]

BLAST of EWM22455.1 vs. NCBI_GenBank
Match: gi|970628999|gb|KUF76409.1| (26S protease regulatory subunit 8 [Phytophthora nicotianae])

HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0
Identity = 337/395 (85.32%), Postives = 363/395 (91.90%), Query Frame = 0

Query:   41 TTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435
            T++ +  G+ SYY  KI+ LE+ VR+ TQNL+RL+AQRNE N+K      EL  LQEPGSYVGEVVK MGK+KVLVKVNPEGKYVVD+DK +DI KCTPNTRVALRNDSY LHKILPTKVDPLVSLMKVE VPDSTYDMIGGLDKQ+REIKEVIELPIKHPELF+ALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREA+PSIIFMDEIDSIGSSR++G  GGDSEVQRTMLELLNQLDGFEPAQNIKV+MATNRIDILDAALLRPGRIDRKIEFP+PT  SR+DI+ IHSRKMNL+RGINLK IAEK+P ASGAECKAVCTEAGMFALRERRIHVTQEDFEMAV+KVMKKDS+ NMSI KLWK
Sbjct:    8 TSADDSAGLTSYYEKKIEHLELTVRDETQNLRRLQAQRNELNSK------ELQLLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPSIIFMDEIDSIGSSRMEGG-GGDSEVQRTMLELLNQLDGFEPAQNIKVIMATNRIDILDAALLRPGRIDRKIEFPNPTEGSRIDIMRIHSRKMNLLRGINLKVIAEKMPTASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVSKVMKKDSEQNMSINKLWK 395

[Close]

BLAST of EWM22455.1 vs. NCBI_GenBank
Match: gi|698781255|ref|XP_009823671.1| (26S protease regulatory subunit 8 [Aphanomyces astaci] >gi|574121395|gb|ETV86872.1| 26S protease regulatory subunit 8 [Aphanomyces astaci])

HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0
Identity = 347/398 (87.19%), Postives = 371/398 (93.22%), Query Frame = 0

Query:   38 TGPTTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435
            TG T   E  G+ SYY  KI+ LE+ VR++T NL+RL+AQRNE N+KVRLLREEL  LQEPGSYVGEVVK MGK+KVLVKVNPEGKYVVD+DK +DITKCTPNTRVALRNDSY LHKILPTKVDPLVSLMKVE VPDSTYDMIGGLDKQ+REIKEVIELPIKHPELF+ALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREA+PSIIFMDEIDSIGSSR++G  GGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPT ASR+DI+ IHSR+MNL+RGINLK IAEK+P ASGAECKAVCTEAGMFALRERR+HVTQEDFEMAV+KVMKKDS+ NMSI KLWK
Sbjct:    2 TGITDGSE--GLTSYYRQKIEHLELTVRDKTMNLRRLQAQRNELNSKVRLLREELQLLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDITKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPSIIFMDEIDSIGSSRMEG--GGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTEASRMDIMRIHSRRMNLLRGINLKVIAEKMPTASGAECKAVCTEAGMFALRERRVHVTQEDFEMAVSKVMKKDSEQNMSINKLWK 395

[Close]

BLAST of EWM22455.1 vs. NCBI_GenBank
Match: gi|673025124|ref|XP_008866523.1| (26S protease regulatory subunit 8 [Aphanomyces invadans] >gi|574478089|gb|ETW05085.1| 26S protease regulatory subunit 8 [Aphanomyces invadans])

HSP 1 Score: 689.878 bits (1779), Expect = 0.000e+0
Identity = 346/398 (86.93%), Postives = 372/398 (93.47%), Query Frame = 0

Query:   38 TGPTTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435
            TG T   E  G+ SYY  KI+ LE+ VR++T NL+RL+AQRNE N+KVRLLREEL  LQEPGSYVGEVVK MGK+KVLVKVNPEGKYVVD+DK +DITKCTPNTRVALRNDSY LHKILPTKVDPLVSLMKVE VPDSTYDMIGGLDKQ+REIKEVIELPIKHPELF+ALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREA+PSIIFMDEIDSIGSSR++G  GGDSEVQRTMLELLNQLDGFEPAQNIKV+MATNRIDILDAALLRPGRIDRKIEFP+PT ASR+DI+ IHSR+MNL+RGINLK IAEK+P ASGAECKAVCTEAGMFALRERR+HVTQEDFEMAV+KVMKKDS+ NMSIRKLWK
Sbjct:    2 TGITDGSE--GLTSYYRQKIEHLELTVRDKTMNLRRLQAQRNELNSKVRLLREELQLLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKAIDITKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPSIIFMDEIDSIGSSRMEG--GGDSEVQRTMLELLNQLDGFEPAQNIKVIMATNRIDILDAALLRPGRIDRKIEFPNPTEASRMDIMRIHSRRMNLLRGINLKVIAEKMPTASGAECKAVCTEAGMFALRERRVHVTQEDFEMAVSKVMKKDSEQNMSIRKLWK 395

[Close]

BLAST of EWM22455.1 vs. NCBI_GenBank
Match: gi|566029900|gb|ETI52811.1| (26S protease regulatory subunit 8 [Phytophthora parasitica P1569])

HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0
Identity = 343/395 (86.84%), Postives = 369/395 (93.42%), Query Frame = 0

Query:   41 TTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435
            T++ +  G+ SYY  KI+ LE+ VR+ TQNL+RL+AQRNE N+KVRLLREEL  LQEPGSYVGEVVK MGK+KVLVKVNPEGKYVVD+DK +DI KCTPNTRVALRNDSY LHKILPTKVDPLVSLMKVE VPDSTYDMIGGLDKQ+REIKEVIELPIKHPELF+ALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREA+PSIIFMDEIDSIGSSR++G  GGDSEVQRTMLELLNQLDGFEPAQNIKV+MATNRIDILDAALLRPGRIDRKIEFP+PT  SR+DI+ IHSRKMNL+RGINLK IAEK+P ASGAECKAVCTEAGMFALRERRIHVTQEDFEMAV+KVMKKDS+ NMSI KLWK
Sbjct:    8 TSADDSAGLTSYYKKKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQLLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPSIIFMDEIDSIGSSRMEGG-GGDSEVQRTMLELLNQLDGFEPAQNIKVIMATNRIDILDAALLRPGRIDRKIEFPNPTEGSRIDIMRIHSRKMNLLRGINLKVIAEKMPTASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVSKVMKKDSEQNMSINKLWK 401

[Close]

BLAST of EWM22455.1 vs. NCBI_GenBank
Match: gi|695426457|ref|XP_009529425.1| (hypothetical protein PHYSODRAFT_546373 [Phytophthora sojae] >gi|348675858|gb|EGZ15676.1| hypothetical protein PHYSODRAFT_546373 [Phytophthora sojae])

HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0
Identity = 343/394 (87.06%), Postives = 368/394 (93.40%), Query Frame = 0

Query:   42 TSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435
            ++ E  G+ SYY  KI+ LE+ VR+ TQNL+RL+AQRNE N+KVRLLREEL  LQEPGSYVGEVVK MGK+KVLVKVNPEGKYVVD+DK +DI KCTPNTRVALRNDSY LHKILPTKVDPLVSLMKVE VPDSTYDMIGGLDKQ+REIKEVIELPIKHPELF+ALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREA+PSIIFMDEIDSIGSSR++G  GGDSEVQRTMLELLNQLDGFEPAQNIKV+MATNRIDILDAALLRPGRIDRKIEFP+PT  SR+DI+ IHSRKMNL+RGINLK IAEK+P ASGAECKAVCTEAGMFALRERRIHVTQEDFEMAV+KVMKKDS+ NMSI KLWK
Sbjct:    9 SADESAGLTSYYEQKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQLLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPSIIFMDEIDSIGSSRMEGG-GGDSEVQRTMLELLNQLDGFEPAQNIKVIMATNRIDILDAALLRPGRIDRKIEFPNPTEGSRIDIMRIHSRKMNLLRGINLKVIAEKMPTASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVSKVMKKDSEQNMSINKLWK 401

[Close]

BLAST of EWM22455.1 vs. NCBI_GenBank
Match: gi|675184901|ref|XP_008901335.1| (26S protease regulatory subunit 8 [Phytophthora parasitica INRA-310] >gi|567967506|gb|ETK92680.1| 26S protease regulatory subunit 8 [Phytophthora parasitica] >gi|567995968|gb|ETL46093.1| 26S protease regulatory subunit 8 [Phytophthora parasitica] >gi|568025225|gb|ETL99243.1| 26S protease regulatory subunit 8 [Phytophthora parasitica] >gi|568055652|gb|ETM52396.1| 26S protease regulatory subunit 8 [Phytophthora parasitica] >gi|568098546|gb|ETN13273.1| 26S protease regulatory subunit 8 [Phytophthora parasitica INRA-310] >gi|570333556|gb|ETO81504.1| 26S protease regulatory subunit 8 [Phytophthora parasitica P1976] >gi|570957659|gb|ETP22638.1| 26S protease regulatory subunit 8 [Phytophthora parasitica CJ01A1] >gi|570993240|gb|ETP50619.1| 26S protease regulatory subunit 8 [Phytophthora parasitica P10297])

HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0
Identity = 343/395 (86.84%), Postives = 369/395 (93.42%), Query Frame = 0

Query:   41 TTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435
            T++ +  G+ SYY  KI+ LE+ VR+ TQNL+RL+AQRNE N+KVRLLREEL  LQEPGSYVGEVVK MGK+KVLVKVNPEGKYVVD+DK +DI KCTPNTRVALRNDSY LHKILPTKVDPLVSLMKVE VPDSTYDMIGGLDKQ+REIKEVIELPIKHPELF+ALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREA+PSIIFMDEIDSIGSSR++G  GGDSEVQRTMLELLNQLDGFEPAQNIKV+MATNRIDILDAALLRPGRIDRKIEFP+PT  SR+DI+ IHSRKMNL+RGINLK IAEK+P ASGAECKAVCTEAGMFALRERRIHVTQEDFEMAV+KVMKKDS+ NMSI KLWK
Sbjct:    8 TSADDSAGLTSYYEKKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQLLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPSIIFMDEIDSIGSSRMEGG-GGDSEVQRTMLELLNQLDGFEPAQNIKVIMATNRIDILDAALLRPGRIDRKIEFPNPTEGSRIDIMRIHSRKMNLLRGINLKVIAEKMPTASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVSKVMKKDSEQNMSINKLWK 401

[Close]

BLAST of EWM22455.1 vs. NCBI_GenBank
Match: gi|301122931|ref|XP_002909192.1| (26S protease regulatory subunit 8 [Phytophthora infestans T30-4] >gi|262099954|gb|EEY58006.1| 26S protease regulatory subunit 8 [Phytophthora infestans T30-4])

HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0
Identity = 342/395 (86.58%), Postives = 369/395 (93.42%), Query Frame = 0

Query:   41 TTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435
            T++ +  G+ SYY  KI+ LE+ VR+ TQNL+RL+AQRNE N+KVRLLREEL  LQEPGSYVGEVVK MGK+KVLVKVNPEGKYVVD+DK +DI KCTPNTRVALRNDSY LHKILPTKVDPLVSLMKVE VPDSTYDMIGGLDKQ+REIKEVIELPIKHPELF+ALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREA+PSIIFMDEIDSIGSSR++G  GGDSEVQRTMLELLNQLDGFEPAQNIKV+MATNRIDILDAALLRPGRIDRKIEFP+PT  SR+DI+ IHSRKMNL+RGINLK IAEK+P +SGAECKAVCTEAGMFALRERRIHVTQEDFEMAV+KVMKKDS+ NMSI KLWK
Sbjct:    8 TSADDSAGLTSYYEQKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQLLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTPNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPSIIFMDEIDSIGSSRMEGG-GGDSEVQRTMLELLNQLDGFEPAQNIKVIMATNRIDILDAALLRPGRIDRKIEFPNPTEGSRIDIMRIHSRKMNLLRGINLKVIAEKMPTSSGAECKAVCTEAGMFALRERRIHVTQEDFEMAVSKVMKKDSEQNMSINKLWK 401

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BLAST of EWM22455.1 vs. NCBI_GenBank
Match: gi|1214709798|gb|OWZ20946.1| (26S protease regulatory protein [Phytophthora megakarya])

HSP 1 Score: 684.871 bits (1766), Expect = 0.000e+0
Identity = 342/395 (86.58%), Postives = 368/395 (93.16%), Query Frame = 0

Query:   41 TTSGEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDITKCTPNTRVALRNDSYTLHKILPTKVDPLVSLMKVEAVPDSTYDMIGGLDKQVREIKEVIELPIKHPELFEALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREAAPSIIFMDEIDSIGSSRVDGSEGGDSEVQRTMLELLNQLDGFEPAQNIKVVMATNRIDILDAALLRPGRIDRKIEFPHPTMASRLDILTIHSRKMNLMRGINLKSIAEKLPNASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDSDSNMSIRKLWK 435
            T++ +  G+ SYY  KI+ LE+ VR+ TQNL+RL+AQRNE N+KVRLLREEL  LQEPGSYVGEVVK MGK+KVLVKVNPEGKYVVD+DK +DI KCT NTRVALRNDSY LHKILPTKVDPLVSLMKVE VPDSTYDMIGGLDKQ+REIKEVIELPIKHPELF+ALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREA+PSIIFMDEIDSIGSSR++G  GGDSEVQRTMLELLNQLDGFEPAQNIKV+MATNRIDILDAALLRPGRIDRKIEFP+PT  SR+DI+ IHSRKMNL+RGINLK IAEK+P ASGAECKAVCTEAGMFALRERRIHVTQEDFEMAV+KVMKKDS+ NMSI KLWK
Sbjct:    8 TSADDSAGLTSYYEQKIEHLELTVRDETQNLRRLQAQRNELNSKVRLLREELQLLQEPGSYVGEVVKQMGKSKVLVKVNPEGKYVVDVDKTIDIAKCTFNTRVALRNDSYVLHKILPTKVDPLVSLMKVEKVPDSTYDMIGGLDKQIREIKEVIELPIKHPELFDALGVAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGSRMVRELFVMAREASPSIIFMDEIDSIGSSRMEGG-GGDSEVQRTMLELLNQLDGFEPAQNIKVIMATNRIDILDAALLRPGRIDRKIEFPNPTEGSRIDIMRIHSRKMNLLRGINLKVIAEKMPTASGAECKAVCTEAGMFALRERRIHVTQEDFEMAVSKVMKKDSEQNMSINKLWK 401

The following BLAST results are available for this feature:

BLAST of EWM22455.1 vs. NCBI_GenBank

BLAST of EWM22455.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585102961\|gb\|EWM22455.1\|	0.000e+0	100.00	26s protease regulatory subunit 8 [Nannochloropsis...	[more]
gi\|299472009\|emb\|CBN80092.1\|	0.000e+0	90.13	conserved unknown protein [Ectocarpus siliculosus]	[more]
gi\|970628999\|gb\|KUF76409.1\|	0.000e+0	85.32	26S protease regulatory subunit 8 [Phytophthora ni...	[more]
gi\|698781255\|ref\|XP_009823671.1\|	0.000e+0	87.19	26S protease regulatory subunit 8 [Aphanomyces ast...	[more]
gi\|673025124\|ref\|XP_008866523.1\|	0.000e+0	86.93	26S protease regulatory subunit 8 [Aphanomyces inv...	[more]
gi\|566029900\|gb\|ETI52811.1\|	0.000e+0	86.84	26S protease regulatory subunit 8 [Phytophthora pa...	[more]
gi\|695426457\|ref\|XP_009529425.1\|	0.000e+0	87.06	hypothetical protein PHYSODRAFT_546373 [Phytophtho...	[more]
gi\|675184901\|ref\|XP_008901335.1\|	0.000e+0	86.84	26S protease regulatory subunit 8 [Phytophthora pa...	[more]
gi\|301122931\|ref\|XP_002909192.1\|	0.000e+0	86.58	26S protease regulatory subunit 8 [Phytophthora in...	[more]
gi\|1214709798\|gb\|OWZ20946.1\|	0.000e+0	86.58	26S protease regulatory protein [Phytophthora mega...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna8210	rna8210	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications