EWM22489.1, cds8185 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22489.1 vs. NCBI_GenBank
Match: gi|585102995|gb|EWM22489.1| (gtp binding protein 3 [Nannochloropsis gaditana]) HSP 1 Score: 868.996 bits (2244), Expect = 0.000e+0 Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0
Query: 1 MDSHSGHSSPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGQEAFASLAGVGPFSKDAPPEDLETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
MDSHSGHSSPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGQEAFASLAGVGPFSKDAPPEDLETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK
Sbjct: 1 MDSHSGHSSPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGQEAFASLAGVGPFSKDAPPEDLETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
BLAST of EWM22489.1 vs. NCBI_GenBank
Match: gi|695396868|ref|XP_009521595.1| (hypothetical protein PHYSODRAFT_479901 [Phytophthora sojae] >gi|348686492|gb|EGZ26307.1| hypothetical protein PHYSODRAFT_479901 [Phytophthora sojae]) HSP 1 Score: 384.8 bits (987), Expect = 1.299e-126 Identity = 214/434 (49.31%), Postives = 288/434 (66.36%), Query Frame = 0
Query: 9 SPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGQEAFASLAGVGPFS--KDAPPEDLETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
S P PR+A+LRKLY P +E LD A+VL P P+SFTGED VELH HGS AVV GV EAL + R AE GEFTERAF N ++DL +VEGLADL++A+T AQR QAL+Q+ G + + YEGWR L CLA+TEA+IDFGDDE DV +AAY+A RVR L++ +R HLADG RGE++R+G++VAI+GPPNAGKS++LN LARRPAAIVS AGTTRDVV+V L++ G PV+VSDTAGIRE D VE+EG+ RA++ A A + VL++D AE+L + + S G + + D + + R + + ++S + G+ ++ + L A ++E + + A +ITR RHR ++ CL L + + ++AAE+LR A +GRI G +DVE+VLDV+F DFCIGK
Sbjct: 74 STALPEPRVAALRKLYHPKTKEHLDDALVLRFPHPKSFTGEDIVELHTHGSVAVVSGVLEALSHV-----PHCRAAEAGEFTERAFDNNKIDLVQVEGLADLLSAETEAQRGQALRQLSGDVGEIYEGWRNSLVRCLAYTEAMIDFGDDEDDVTDAAYEAAVDRVRVLADSIRGHLADGRRGEILRSGVQVAILGPPNAGKSSLLNVLARRPAAIVSSIAGTTRDVVQVPLNIAGYPVIVSDTAGIRE-TEDLVEKEGVLRAQQCASDADICVLMMDNAELLHNDEYQSYLKEGAIAVLNKSDQFDEDEIGRVISTFDTEQ---RDQLLVISCAEGDNIDVFVDNLAAAVKEKLEM--SSGASANGALITRERHRQNLVECLSCLERFLADPYQS-EIAAEDLRRAVMAIGRILGRIDVEDVLDVLFADFCIGK 495
BLAST of EWM22489.1 vs. NCBI_GenBank
Match: gi|397643422|gb|EJK75853.1| (hypothetical protein THAOC_02405 [Thalassiosira oceanica]) HSP 1 Score: 387.111 bits (993), Expect = 5.490e-126 Identity = 235/474 (49.58%), Postives = 299/474 (63.08%), Query Frame = 0
Query: 5 SGHSSPPFPAPRMASLRKLYCPVG--------QEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDE-LDVDEAAYDA------------IRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQ---EGIRRAREAAGRAQLTVLVLDAA-EVLGQEAFASLA---GVGPFSKDAPPEDLETVL--RALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDER-----AEAPVITRARHRVHVERCLEALT--ASMGEQG-LGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
+G P P PRMASLR LY P+ ++ LD A+VL PGPRSFTGED VELHCHGSRAV GV +AL +LD VR A+PGEFT+RA+ NG++ L EVE LADLI ADT+ QRKQAL+Q G L + Y GWR+EL LAH EAVIDFGDDE L +++++D+ +RPR+ L E M RHL D RGE++R G+R+AIVG PNAGKS++LN LA R AAIVS GTTRDVVEV LD+ G+ + DTAG+RE D V++ EG++RAR AA A L V V+D + + G EA L G ++ +P +L VL R L G + + +S +T +GV+ LA L R + ++G E VITRARHR HVE +AL + QG + LD+AAEELR+AS+ELGR+TGA+DVE+VLDV+F DFCIGK
Sbjct: 144 AGAEPPKLPTPRMASLRILYDPLSSSDHLNRMRDPLDSALVLIFPGPRSFTGEDIVELHCHGSRAVTSGVLKALSSLDS-----VRPADPGEFTQRAYGNGKLGLVEVEALADLIVADTSLQRKQALQQFDGRLSRLYLGWRKELIKGLAHAEAVIDFGDDEALGEEDSSFDSSENDGGMSVWADVRPRISSLREAMDRHLEDASRGELLRDGLRIAIVGRPNAGKSSLLNLLAGRDAAIVSSTPGTTRDVVEVVLDLDGVRCSLLDTAGVREEIEDGVDEIEIEGMKRARLAAQEAHLIVGVVDCSDQKRGLEAVQELIRADGHSDSARSSPHNNLLYVLNKRDLFEGEMEPCGVDSETFAISCTTNQGVDIFLAALSKRALAMISQEGDSSGDLSVVGTEGAVITRARHRRHVEAASDALQRFEVLSSQGYMALDMAAEELRLASSELGRVTGAIDVEDVLDVLFADFCIGK 612
BLAST of EWM22489.1 vs. NCBI_GenBank
Match: gi|675174403|ref|XP_008896086.1| (tRNA modification GTPase TrmE, variant [Phytophthora parasitica INRA-310] >gi|568103753|gb|ETN18410.1| tRNA modification GTPase TrmE, variant [Phytophthora parasitica INRA-310]) HSP 1 Score: 381.333 bits (978), Expect = 3.783e-125 Identity = 214/435 (49.20%), Postives = 288/435 (66.21%), Query Frame = 0
Query: 9 SPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLD--AAEVLGQEAFASLAGVGPFSKDAPPEDL-ETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
S P PR+A+LRKLY P +E LD A+VL P P SFTGED VELH HGS AVV GV EAL + R AEPGEFTERAF N ++DL +VEGLADL++A+T AQR QAL+Q+ G + + YEGWR+ L CLA+TEA+IDFGDDE DV +AAY+A RVR L++ +R HLADG RGE++R+G++VAIVGPPNAGKS++LN LARRPAAIVS AGTTRDVV+V L++ G PV+VSDTAG+RE D +E+EG+ RA++ A A + V+++D A L + S G F+ + + E+ + ++ A K +VS + G+ V+ + L ++E + + +ITR RHR ++ CL L + + ++AAE+LR A+ +GRI G +DVE+VLDV+F DFCIGK
Sbjct: 74 STALPKPRVAALRKLYHPKTKEHLDDALVLRFPHPNSFTGEDIVELHTHGSVAVVSGVLEALSHV-----PHCRAAEPGEFTERAFDNNKIDLVQVEGLADLLSAETEAQRSQALRQLSGDIGEIYEGWRDSLVKCLAYTEAMIDFGDDEDDVTDAAYEAAVDRVRALADSIRGHLADGRRGEILRSGVQVAIVGPPNAGKSSLLNILARRPAAIVSSIAGTTRDVVQVPLNIAGYPVIVSDTAGLRE-TEDIIEKEGVLRAQQCASDADICVVMMDIQNARQLHSGEYQSYLRHGAFAVLNKSDQVDESQIASVLETFASK--QRDQLLVVSCANGDNVDVFVDKLATAVKEKLEVSAGGS--SNGTLITRERHRQNLVECLSCLDRFLADPYQS-EIAAEDLRRAAMAIGRILGRIDVEDVLDVLFADFCIGK 497
BLAST of EWM22489.1 vs. NCBI_GenBank
Match: gi|675174401|ref|XP_008896085.1| (tRNA modification GTPase TrmE [Phytophthora parasitica INRA-310] >gi|568103752|gb|ETN18409.1| tRNA modification GTPase TrmE [Phytophthora parasitica INRA-310]) HSP 1 Score: 380.948 bits (977), Expect = 1.002e-124 Identity = 214/435 (49.20%), Postives = 288/435 (66.21%), Query Frame = 0
Query: 9 SPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLD--AAEVLGQEAFASLAGVGPFSKDAPPEDL-ETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
S P PR+A+LRKLY P +E LD A+VL P P SFTGED VELH HGS AVV GV EAL + R AEPGEFTERAF N ++DL +VEGLADL++A+T AQR QAL+Q+ G + + YEGWR+ L CLA+TEA+IDFGDDE DV +AAY+A RVR L++ +R HLADG RGE++R+G++VAIVGPPNAGKS++LN LARRPAAIVS AGTTRDVV+V L++ G PV+VSDTAG+RE D +E+EG+ RA++ A A + V+++D A L + S G F+ + + E+ + ++ A K +VS + G+ V+ + L ++E + + +ITR RHR ++ CL L + + ++AAE+LR A+ +GRI G +DVE+VLDV+F DFCIGK
Sbjct: 100 STALPKPRVAALRKLYHPKTKEHLDDALVLRFPHPNSFTGEDIVELHTHGSVAVVSGVLEALSHV-----PHCRAAEPGEFTERAFDNNKIDLVQVEGLADLLSAETEAQRSQALRQLSGDIGEIYEGWRDSLVKCLAYTEAMIDFGDDEDDVTDAAYEAAVDRVRALADSIRGHLADGRRGEILRSGVQVAIVGPPNAGKSSLLNILARRPAAIVSSIAGTTRDVVQVPLNIAGYPVIVSDTAGLRE-TEDIIEKEGVLRAQQCASDADICVVMMDIQNARQLHSGEYQSYLRHGAFAVLNKSDQVDESQIASVLETFASK--QRDQLLVVSCANGDNVDVFVDKLATAVKEKLEVSAGGS--SNGTLITRERHRQNLVECLSCLDRFLADPYQS-EIAAEDLRRAAMAIGRILGRIDVEDVLDVLFADFCIGK 523
BLAST of EWM22489.1 vs. NCBI_GenBank
Match: gi|567950777|gb|ETK76485.1| (tRNA modification GTPase TrmE [Phytophthora parasitica]) HSP 1 Score: 378.252 bits (970), Expect = 5.108e-124 Identity = 213/435 (48.97%), Postives = 287/435 (65.98%), Query Frame = 0
Query: 9 SPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLD--AAEVLGQEAFASLAGVGPFSKDAPPEDL-ETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
S P PR+A+LRKLY P +E LD A+VL P P SFTGED VELH HGS AVV GV EAL + R AE GEFTERAF N ++DL +VEGLADL++A+T AQR QAL+Q+ G + + YEGWR+ L CLA+TEA+IDFGDDE DV +AAY+A RVR L++ +R HLADG RGE++R+G++VAIVGPPNAGKS++LN LARRPAAIVS AGTTRDVV+V L++ G PV+VSDTAG+RE D +E+EG+ RA++ A A + V+++D A L + S G F+ + + E+ + ++ A K +VS + G+ V+ + L ++E + + +ITR RHR ++ CL L + + ++AAE+LR A+ +GRI G +DVE+VLDV+F DFCIGK
Sbjct: 74 STALPKPRVAALRKLYHPKTKEHLDDALVLRFPHPNSFTGEDIVELHTHGSVAVVSGVLEALSHV-----PHCRAAEAGEFTERAFDNNKIDLVQVEGLADLLSAETEAQRSQALRQLSGDIGEIYEGWRDSLVKCLAYTEAMIDFGDDEDDVTDAAYEAAVDRVRALADSIRGHLADGRRGEILRSGVQVAIVGPPNAGKSSLLNILARRPAAIVSSIAGTTRDVVQVPLNIAGYPVIVSDTAGLRE-TEDIIEKEGVLRAQQCASDADICVVMMDIQNARQLHNGEYQSYLRHGAFAVLNKSDQVDESQIASVLETFASK--QRDQLLVVSCANGDNVDVFVDKLATAVKEKLEVSAGG--SSNGALITRERHRQNLVECLSCLDRFLADPYQS-EIAAEDLRRAAMAIGRILGRIDVEDVLDVLFADFCIGK 497
BLAST of EWM22489.1 vs. NCBI_GenBank
Match: gi|568038861|gb|ETM36376.1| (tRNA modification GTPase TrmE [Phytophthora parasitica]) HSP 1 Score: 378.637 bits (971), Expect = 7.764e-124 Identity = 213/435 (48.97%), Postives = 287/435 (65.98%), Query Frame = 0
Query: 9 SPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLD--AAEVLGQEAFASLAGVGPFSKDAPPEDL-ETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
S P PR+A+LRKLY P +E LD A+VL P P SFTGED VELH HGS AVV GV EAL + R AE GEFTERAF N ++DL +VEGLADL++A+T AQR QAL+Q+ G + + YEGWR+ L CLA+TEA+IDFGDDE DV +AAY+A RVR L++ +R HLADG RGE++R+G++VAIVGPPNAGKS++LN LARRPAAIVS AGTTRDVV+V L++ G PV+VSDTAG+RE D +E+EG+ RA++ A A + V+++D A L + S G F+ + + E+ + ++ A K +VS + G+ V+ + L ++E + + +ITR RHR ++ CL L + + ++AAE+LR A+ +GRI G +DVE+VLDV+F DFCIGK
Sbjct: 100 STALPKPRVAALRKLYHPKTKEHLDDALVLRFPHPNSFTGEDIVELHTHGSVAVVSGVLEALSHV-----PHCRAAEAGEFTERAFDNNKIDLVQVEGLADLLSAETEAQRSQALRQLSGDIGEIYEGWRDSLVKCLAYTEAMIDFGDDEDDVTDAAYEAAVDRVRALADSIRGHLADGRRGEILRSGVQVAIVGPPNAGKSSLLNILARRPAAIVSSIAGTTRDVVQVPLNIAGYPVIVSDTAGLRE-TEDIIEKEGVLRAQQCASDADICVVMMDIQNARQLHNGEYQSYLRHGAFAVLNKSDQVDESQIASVLETFASK--QRDQLLVVSCANGDNVDVFVDKLATAVKEKLEVSAGGS--SNGALITRERHRQNLVECLSCLDRFLADPYQS-EIAAEDLRRAAMAIGRILGRIDVEDVLDVLFADFCIGK 523
BLAST of EWM22489.1 vs. NCBI_GenBank
Match: gi|566013321|gb|ETI36232.1| (tRNA modification GTPase TrmE, variant [Phytophthora parasitica P1569] >gi|567979444|gb|ETL29923.1| tRNA modification GTPase TrmE [Phytophthora parasitica] >gi|570940827|gb|ETP06084.1| tRNA modification GTPase TrmE, variant [Phytophthora parasitica CJ01A1] >gi|570971073|gb|ETP34192.1| tRNA modification GTPase TrmE [Phytophthora parasitica P10297] >gi|570971074|gb|ETP34193.1| tRNA modification GTPase TrmE, variant [Phytophthora parasitica P10297]) HSP 1 Score: 377.867 bits (969), Expect = 7.797e-124 Identity = 213/435 (48.97%), Postives = 287/435 (65.98%), Query Frame = 0
Query: 9 SPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLD--AAEVLGQEAFASLAGVGPFSKDAPPEDL-ETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
S P PR+A+LRKLY P +E LD A+VL P P SFTGED VELH HGS AVV GV EAL + R AE GEFTERAF N ++DL +VEGLADL++A+T AQR QAL+Q+ G + + YEGWR+ L CLA+TEA+IDFGDDE DV +AAY+A RVR L++ +R HLADG RGE++R+G++VAIVGPPNAGKS++LN LARRPAAIVS AGTTRDVV+V L++ G PV+VSDTAG+RE D +E+EG+ RA++ A A + V+++D A L + S G F+ + + E+ + ++ A K +VS + G+ V+ + L ++E + + +ITR RHR ++ CL L + + ++AAE+LR A+ +GRI G +DVE+VLDV+F DFCIGK
Sbjct: 74 STALPKPRVAALRKLYHPKTKEHLDDALVLRFPHPNSFTGEDIVELHTHGSVAVVSGVLEALSHV-----PHCRAAEAGEFTERAFDNNKIDLVQVEGLADLLSAETEAQRSQALRQLSGDIGEIYEGWRDSLVKCLAYTEAMIDFGDDEDDVTDAAYEAAVDRVRALADSIRGHLADGRRGEILRSGVQVAIVGPPNAGKSSLLNILARRPAAIVSSIAGTTRDVVQVPLNIAGYPVIVSDTAGLRE-TEDIIEKEGVLRAQQCASDADICVVMMDIQNARQLHSGEYQSYLRHGAFAVLNKSDQVDESQIASVLETFASK--QRDQLLVVSCANGDNVDVFVDKLATAVKEKLEVSAGGS--SNGALITRERHRQNLVECLSCLDRFLADPYQS-EIAAEDLRRAAMAIGRILGRIDVEDVLDVLFADFCIGK 497
BLAST of EWM22489.1 vs. NCBI_GenBank
Match: gi|655969911|ref|WP_029012503.1| (tRNA modification GTPase [Niveispirillum irakense]) HSP 1 Score: 375.555 bits (963), Expect = 1.051e-123 Identity = 221/440 (50.23%), Postives = 285/440 (64.77%), Query Frame = 0
Query: 1 MDSHSGHSSPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGQEAFASLAGVGPFSKDAPPEDLETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
+ + +GH P PR A L L P E D+A++LW PGP SFTGED ELH HG RAV+Q T AL+ L +R+AEPGEF+ RAF NG++DLTE E +ADL+ A+TAAQR+QAL+QM GAL Q Y+GWR L LAH EA IDF ++ D+ DA+RP V +L +E+ HLAD GRGE +R GI +AI+G PNAGKS+++N +ARR AIVS AGTTRDV+EVQLD+GG PVL++DTAG+REAA D VE EGIRRA + AG+A L +LV D L A+LA D V+ + GA + + VS TG+G+ ++LA LQA + + + G AP +TRARHR +E CL L ++ Q ++AAE++R+A+ LGRITG VDVEE+LDVIFRDFCIGK
Sbjct: 32 LQALAGH----LPLPRQARLAVLTDPSTGEVFDKALLLWFPGPASFTGEDVAELHLHGGRAVLQAATAALVGLG------LRVAEPGEFSRRAFENGKLDLTEAEAIADLVDAETAAQRRQALRQMEGALGQLYDGWRHRLTRALAHLEADIDFPEE--DLPGGLSDAVRPVVLKLVDELHHHLADQGRGERLRDGISIAILGAPNAGKSSLMNAIARRDVAIVSNQAGTTRDVIEVQLDLGGYPVLLADTAGLREAA-DQVESEGIRRAMDRAGKADLKLLVFDG---LSDPDAATLA--------LADGDALLVMNKADQPGARPPLSGPSVLQVSARTGDGIPDLLAALQAEVAKRYAPSG-------APALTRARHRSALEDCLSHLQRAL--QAPLPELAAEDVRLAARALGRITGRVDVEELLDVIFRDFCIGK 438
BLAST of EWM22489.1 vs. NCBI_GenBank
Match: gi|570940826|gb|ETP06083.1| (tRNA modification GTPase TrmE [Phytophthora parasitica CJ01A1]) HSP 1 Score: 378.252 bits (970), Expect = 1.120e-123 Identity = 213/435 (48.97%), Postives = 287/435 (65.98%), Query Frame = 0
Query: 9 SPPFPAPRMASLRKLYCPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGEARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLD--AAEVLGQEAFASLAGVGPFSKDAPPEDL-ETVLRALRRAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVFDKDGTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 440
S P PR+A+LRKLY P +E LD A+VL P P SFTGED VELH HGS AVV GV EAL + R AE GEFTERAF N ++DL +VEGLADL++A+T AQR QAL+Q+ G + + YEGWR+ L CLA+TEA+IDFGDDE DV +AAY+A RVR L++ +R HLADG RGE++R+G++VAIVGPPNAGKS++LN LARRPAAIVS AGTTRDVV+V L++ G PV+VSDTAG+RE D +E+EG+ RA++ A A + V+++D A L + S G F+ + + E+ + ++ A K +VS + G+ V+ + L ++E + + +ITR RHR ++ CL L + + ++AAE+LR A+ +GRI G +DVE+VLDV+F DFCIGK
Sbjct: 101 STALPKPRVAALRKLYHPKTKEHLDDALVLRFPHPNSFTGEDIVELHTHGSVAVVSGVLEALSHV-----PHCRAAEAGEFTERAFDNNKIDLVQVEGLADLLSAETEAQRSQALRQLSGDIGEIYEGWRDSLVKCLAYTEAMIDFGDDEDDVTDAAYEAAVDRVRALADSIRGHLADGRRGEILRSGVQVAIVGPPNAGKSSLLNILARRPAAIVSSIAGTTRDVVQVPLNIAGYPVIVSDTAGLRE-TEDIIEKEGVLRAQQCASDADICVVMMDIQNARQLHSGEYQSYLRHGAFAVLNKSDQVDESQIASVLETFASK--QRDQLLVVSCANGDNVDVFVDKLATAVKEKLEVSAGG--SSNGALITRERHRQNLVECLSCLDRFLADPYQS-EIAAEDLRRAAMAIGRILGRIDVEDVLDVLFADFCIGK 524 The following BLAST results are available for this feature:
BLAST of EWM22489.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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