EWM22483.1, cds8184 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22483.1 vs. NCBI_GenBank
Match: gi|585102989|gb|EWM22483.1| (phage spo1 dna polymerase-related protein [Nannochloropsis gaditana]) HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 Query: 1 MKTRHYFHGESILRMLVVVLTQLRTAAWSLQRGILLPAIRPTVRSVTFLRAAERSPSSAAEQVPTPPTSLTVSPLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLDESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDELAGAGGGEGVWAPGKQGKEG 298 MKTRHYFHGESILRMLVVVLTQLRTAAWSLQRGILLPAIRPTVRSVTFLRAAERSPSSAAEQVPTPPTSLTVSPLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLDESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDELAGAGGGEGVWAPGKQGKEG Sbjct: 1 MKTRHYFHGESILRMLVVVLTQLRTAAWSLQRGILLPAIRPTVRSVTFLRAAERSPSSAAEQVPTPPTSLTVSPLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLDESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDELAGAGGGEGVWAPGKQGKEG 298
BLAST of EWM22483.1 vs. NCBI_GenBank
Match: gi|518332243|ref|WP_019502450.1| (uracil-DNA glycosylase [Pseudanabaena sp. PCC 6802]) HSP 1 Score: 217.624 bits (553), Expect = 8.407e-67 Identity = 123/238 (51.68%), Postives = 148/238 (62.18%), Query Frame = 0 Query: 49 LRAAERSPSSAAEQVPTPPTS-------LTVSPLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLDESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDEL 279 + ++R S + P PP S + V P +A YA + PL A VV+ RGN AKIM+IGEAPG+ ED +G PFVG+AG+LLD ILASVGLDES+VYI N+ RPP NR P+ EVA PYL+E +RLVDP IILL GA A KA+ +K+GITRIRG+W E QG RL MPIFHP+YLLRN SR+ PKWL WQDIQ V+ RY EL Sbjct: 1 MNQSDREQMSLFDLEPVPPKSEAKPTVPVAVPPASNAIYANLDALRAEAMACQKCPLAATRINVVVERGNRNAKIMIIGEAPGQNEDEQGLPFVGKAGQLLDKILASVGLDESNVYICNINKCRPPGNRVPTDEEVAACKPYLLEQIRLVDPKIILLTGATAVKAITG-DKRGITRIRGEWME----------WQG-RLAMPIFHPAYLLRNASREEGSPKWLMWQDIQRVKARYLEL 226
BLAST of EWM22483.1 vs. NCBI_GenBank
Match: gi|1176234598|gb|OQY43543.1| (hypothetical protein B6242_14430 [Anaerolineaceae bacterium 4572_78]) HSP 1 Score: 216.468 bits (550), Expect = 9.381e-67 Identity = 109/207 (52.66%), Postives = 138/207 (66.67%), Query Frame = 0 Query: 80 YAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDELAGAGGG 285 Y H V+ L+ L DPL++ G+ +VI+RG A +M+IGEAPG ED GKPFVGR+G+LLD IL +V + E+ +YITN + RRPPNNR P E+ +Y P+L E +RLVDP IILLAG A +L EK+GIT++RGQW E QG R VMPIFHP+YLLRNP + PK L W+DI+AVR +YDEL G G Sbjct: 12 YPTHQALVETLKNLTDDPLESTGSNMVIYRGYPKADLMIIGEAPGAEEDKIGKPFVGRSGQLLDKILQAVHFNIETDIYITNTLKRRPPNNRNPKQEELEYYFPFLAEEIRLVDPKIILLAGKYAMLTILQ-EKRGITKVRGQWVE-----------QGGRWVMPIFHPAYLLRNPRKTPGSPKALMWEDIRAVRAKYDELRNDGDG 206
BLAST of EWM22483.1 vs. NCBI_GenBank
Match: gi|515380047|ref|WP_016875285.1| (uracil-DNA glycosylase [Chlorogloeopsis fritschii]) HSP 1 Score: 215.698 bits (548), Expect = 3.862e-66 Identity = 122/233 (52.36%), Postives = 142/233 (60.94%), Query Frame = 0 Query: 49 LRAAERSPSSAAEQVPTPPTSLTVSPLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDELA 280 L E S S+ E +PT + P+P YA + Q L T V+ RGN AKIMVIGEAPG+ ED G PFVGRAG+LL+ ILASV LD E VYI N+ RPPNNR P+ E+ PYL+E +RLV P IILL GA A K LL +K+GIT+IRG W E EG L MPIFHPSYLLRNPSR+V PKWL WQDIQAVR +YDE+ Sbjct: 7 LSLFEESNSNQKELIPTD----SKIPIPSGTYANMTELAQHCNQCHRCELGKTRTHAVVGRGNLEAKIMVIGEAPGQNEDETGLPFVGRAGQLLEKILASVKLDTEKDVYICNINKCRPPNNRVPTNEEMEACKPYLLEQIRLVAPKIILLTGATAVKGLLG-DKRGITKIRGTWME----WEG-------HLCMPIFHPSYLLRNPSREVNSPKWLMWQDIQAVRAKYDEIC 223
BLAST of EWM22483.1 vs. NCBI_GenBank
Match: gi|502957771|ref|WP_013192747.1| (uracil-DNA glycosylase [Trichormus azollae] >gi|298234601|gb|ADI65737.1| phage SPO1 DNA polymerase-related protein ['Nostoc azollae' 0708]) HSP 1 Score: 214.927 bits (546), Expect = 7.994e-66 Identity = 118/225 (52.44%), Postives = 142/225 (63.11%), Query Frame = 0 Query: 58 SAAEQVPTPPTSLTVSPLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDELAG 281 S+ Q PT + P+P YA + Q R L T V+ RGN AKIM+IGEAPG++ED G PFVG++G+LL+ ILASV L E VYI N+ RPP NR P+A E+A PYL+E +RLVDP IILL GA A K + KQGIT+IRGQW E +EG RL MPIFHPSYLLRNPSR+ PKWL WQDIQAV+ +YDE+ G Sbjct: 13 SSFNQKDLIPTDAKI-PIPSGTYANMPELAQHCNNCRRCGLGDNRTHAVVGRGNLQAKIMIIGEAPGQSEDETGLPFVGKSGQLLEKILASVNLSTEEDVYIGNINKCRPPENRVPTAEEMAACKPYLLEQIRLVDPKIILLTGATAVKGITG-SKQGITKIRGQWLE----SEG-------RLCMPIFHPSYLLRNPSREKGSPKWLMWQDIQAVKAKYDEIKG 224
BLAST of EWM22483.1 vs. NCBI_GenBank
Match: gi|1011384597|ref|WP_062297347.1| (DNA polymerase [Nostoc piscinale] >gi|930353364|gb|ALF55809.1| DNA polymerase [Nostoc piscinale CENA21]) HSP 1 Score: 213.772 bits (543), Expect = 1.969e-65 Identity = 116/216 (53.70%), Postives = 140/216 (64.81%), Query Frame = 0 Query: 67 PTSLTVSPLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDELAG 281 PT + P+P Y + Q + L T V+ RGN A IM++GEAPG++ED G PFVGR+G+LL+ ILASV L E VYI N+ RPPNNR P+ +E+A +PYL+E +RLVDP IILL GA A K L EKQGIT+IRGQW E EG RL MPIFHPSYLLRNPS++ PKWL WQDIQAVR +YDE+AG Sbjct: 22 PTDAKI-PIPAGTYTNMTELAQHCNQCQRCELGQTRTHAVVGRGNLNAPIMIVGEAPGQSEDETGLPFVGRSGQLLEKILASVNLSTEQDVYIGNINKCRPPNNRVPTPNEMAACIPYLLEQIRLVDPQIILLTGATAVKGLTG-EKQGITKIRGQWIE----WEG-------RLCMPIFHPSYLLRNPSKEKGSPKWLMWQDIQAVRAKYDEIAG 224
BLAST of EWM22483.1 vs. NCBI_GenBank
Match: gi|737171863|ref|WP_035158067.1| (DNA polymerase [Calothrix sp. 336/3] >gi|817929701|gb|AKG24189.1| DNA polymerase [Calothrix sp. 336/3]) HSP 1 Score: 212.616 bits (540), Expect = 8.029e-65 Identity = 114/207 (55.07%), Postives = 137/207 (66.18%), Query Frame = 0 Query: 74 PLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDEL 279 P+P YA + Q Q + L VV+ +GN A IM+IGEAPG+ ED +GKPFVGR+G+LLD ILASV LD E VYI N+ RPP+NR P+ EVA PYL+E +RLVDP IILL GA A K+L +K+GIT+IRGQW E EG RL MPIFHPSYLLRNPS++ PKWL WQDIQ VR +YDE+ Sbjct: 35 PIPAGTYADITELTQYCQNCQRCGLATSRINVVVGKGNPQALIMIIGEAPGQHEDEQGKPFVGRSGQLLDKILASVNLDTEKDVYICNINKCRPPDNRVPTNEEVAACRPYLLEQIRLVDPKIILLTGATAVKSLTG-DKRGITKIRGQWME----WEG-------RLCMPIFHPSYLLRNPSKETGSPKWLMWQDIQLVRGKYDEI 229
BLAST of EWM22483.1 vs. NCBI_GenBank
Match: gi|1197737097|ref|WP_086687175.1| (uracil-DNA glycosylase [Nostoc sp. T09] >gi|1196012185|gb|OUL34155.1| uracil-DNA glycosylase [Nostoc sp. T09]) HSP 1 Score: 210.305 bits (534), Expect = 3.505e-64 Identity = 118/224 (52.68%), Postives = 141/224 (62.95%), Query Frame = 0 Query: 57 SSAAEQVPTPPTSLTVSPLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDEL 279 S+ Q PT + P+P Y+ + Q L T V+ RGN A IMV+GEAPG+ ED G PFVGR+G+LL+ ILASV L E+ VYI N+ RPP NR P+ E+A LPYL+E +RLVDP IILL GA A K L +K+GIT+IRGQW E QG RL MPIFHPSYLLRNPSR+V GPKWL WQDIQAVR +YDE+ Sbjct: 12 DSSFNQRDLIPTDAKI-PIPANTYSDMTELAQHCNQCHRCGLGDNRTHAVVGRGNLKAPIMVVGEAPGQNEDETGLPFVGRSGQLLEKILASVSLSTENDVYIANINKCRPPENRVPTTEEMAACLPYLLEQIRLVDPKIILLTGATAVKGLTG-DKRGITKIRGQWIE----------WQG-RLCMPIFHPSYLLRNPSREVGGPKWLMWQDIQAVRAKYDEI 222
BLAST of EWM22483.1 vs. NCBI_GenBank
Match: gi|654354261|ref|WP_027846911.1| (DNA polymerase [Mastigocoleus testarum] >gi|959131659|gb|KST66841.1| DNA polymerase [Mastigocoleus testarum BC008] >gi|959135180|gb|KST70179.1| DNA polymerase [Mastigocoleus testarum BC008]) HSP 1 Score: 210.69 bits (535), Expect = 4.228e-64 Identity = 115/214 (53.74%), Postives = 136/214 (63.55%), Query Frame = 0 Query: 67 PTSLTVSPLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDEL 279 PTS + P+P YA + + L + VI RGN A I V+GEAPG+ ED G PFVGRAG+LLD ILA+V LD E VYI N+ RPPNNRTP+ E+A PY++E +RLVDP IILL GA A K L EK+GIT+IRG W E EG RL MPIFHPSYLLRNPSR+ PKWL WQDI+AVR +YDE+ Sbjct: 22 PTSAKI-PIPSGTYANMTEITEHCNSCHRCSLGSTRKHAVIGRGNQKALIAVVGEAPGQNEDETGLPFVGRAGQLLDKILAAVRLDSEKDVYICNIAKCRPPNNRTPTTEEIAACKPYILEQIRLVDPKIILLTGATAVKGLTA-EKRGITKIRGTWME----WEG-------RLCMPIFHPSYLLRNPSREKGSPKWLMWQDIRAVRAKYDEI 222
BLAST of EWM22483.1 vs. NCBI_GenBank
Match: gi|1210183532|dbj|BAZ02593.1| (phage SPO1 DNA polymerase-like protein [Tolypothrix tenuis PCC 7101] >gi|1210254484|dbj|BAZ73486.1| phage SPO1 DNA polymerase-like protein [Aulosira laxa NIES-50]) HSP 1 Score: 210.305 bits (534), Expect = 5.393e-64 Identity = 115/214 (53.74%), Postives = 138/214 (64.49%), Query Frame = 0 Query: 67 PTSLTVSPLPDARYAGHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNPSRKVEGPKWLTWQDIQAVRRRYDEL 279 PT + P+P Y+ + Q L T V+ RGN A IMV+GEAPG+ ED G PFVG++G+LL+ ILASV L E+ VYI N+ RPP NR P+ E+A LPYL+E +RLVDP IILL GA A K L +K+GIT+IRGQW E QG RL MPIFHPSYLLRNPSR+V GPKWL WQDIQAVR +YDE+ Sbjct: 22 PTDAKI-PIPANTYSDMPELAQHCNQCHRCGLGNNRTHAVVGRGNLKAPIMVVGEAPGQNEDETGLPFVGKSGQLLEKILASVNLSTETDVYICNINKCRPPENRVPTTEEMAACLPYLLEQIRLVDPKIILLTGATAVKGLTN-DKRGITKIRGQWIE----------WQG-RLCMPIFHPSYLLRNPSREVGGPKWLMWQDIQAVRAKYDEI 222 The following BLAST results are available for this feature:
BLAST of EWM22483.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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