EWM22447.1, cds8181 (CDS) Nannochloropsis gaditana

Overview
NameEWM22447.1
Unique Namecds8181
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:84747..86408 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22447.1
Productt-complex protein 1 subunit delta
Orig transcript idgnl|cribi|Naga_100011g18.3447.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:84747..86408 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0051082unfolded protein binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR002194Chaperonin_TCP-1_CS
IPR027410TCP-1-like_intermed
IPR002423Cpn60/TCP-1
IPR027413GROEL-like_equatorial
IPR027409GroEL-like_apical_dom
IPR012717Chap_CCT_delta
IPR017998Chaperone_TCP-1
Homology
BLAST of EWM22447.1 vs. NCBI_GenBank
Match: gi|585102953|gb|EWM22447.1| (t-complex protein 1 subunit delta [Nannochloropsis gaditana])

HSP 1 Score: 1130.16 bits (2922), Expect = 0.000e+0
Identity = 553/553 (100.00%), Postives = 553/553 (100.00%), Query Frame = 0
Query:    1 MAPFFFNFENCVIDLSASRSRSTICLGSSPDLVFLTHLCHHQRQHFMVLPGVADAIRTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAAGGPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPVARV 553
            MAPFFFNFENCVIDLSASRSRSTICLGSSPDLVFLTHLCHHQRQHFMVLPGVADAIRTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAAGGPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPVARV
Sbjct:    1 MAPFFFNFENCVIDLSASRSRSTICLGSSPDLVFLTHLCHHQRQHFMVLPGVADAIRTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAAGGPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPVARV 553          
BLAST of EWM22447.1 vs. NCBI_GenBank
Match: gi|298706489|emb|CBJ29476.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 767.689 bits (1981), Expect = 0.000e+0
Identity = 375/506 (74.11%), Postives = 433/506 (85.57%), Query Frame = 0
Query:   45 HFMVLPGVADAIRTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAAGGPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPV 550
            + +    VADAIRTSLGPRGMDKMIQ GDGEV+ITNDGATILGQM VFHP AKMLVELSKSQDIEAGDGTTSV V+AG++LNAC+DLLAKGIHP  +A+SF AA++KAEEIL+ MS PVDL  RETLI AV TCLSSKVVSQN + ++P+AVDAVL IIDP  A NVDL DI+I KQLGGT+DD+ELV G+VFEKGA K +AGGPT IE AKVGLIQF LSAPKTDMENNVVVSDYAAMDRILREERKYIL L KKIKK+GC VLLVQKSILRDAYNDLS+HFLAKM IMVIT+VER D+EFI RTL   P AHID+F  DKLG+A+LV EV++PG  HK+VKVTGV   G TM++L+RGSN+LVL+EA+RS+HDALCVVRSLVKKRFLI+GGGAAETEV + LTEW+K Q GM+ YC+ A+ ++LEVVPYTLAEN G+NPI+IVTELR  HA G+ G GINVR+  ISDMY E V+QP+LV+ SA+ LA+E V M++KIDD+V V
Sbjct:   25 NILAAKAVADAIRTSLGPRGMDKMIQGGDGEVVITNDGATILGQMQVFHPTAKMLVELSKSQDIEAGDGTTSVCVIAGALLNACTDLLAKGIHPMAVAESFLAAADKAEEILEGMSTPVDLANRETLIQAVDTCLSSKVVSQNCETISPMAVDAVLGIIDPINATNVDLRDIKICKQLGGTIDDSELVHGMVFEKGAKK-SAGGPTTIENAKVGLIQFCLSAPKTDMENNVVVSDYAAMDRILREERKYILGLCKKIKKAGCTVLLVQKSILRDAYNDLSIHFLAKMGIMVITDVERNDIEFISRTLALKPCAHIDTFNADKLGTADLVQEVSMPGSGHKIVKVTGVPTTGMTMTVLMRGSNRLVLDEAERSVHDALCVVRSLVKKRFLISGGGAAETEVAMQLTEWAKTQTGMRGYCIRAYGEALEVVPYTLAENAGMNPISIVTELRSEHAKGKVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAV 529          
BLAST of EWM22447.1 vs. NCBI_GenBank
Match: gi|224006794|ref|XP_002292357.1| (t-complex protein 1 delta subunit [Thalassiosira pseudonana CCMP1335] >gi|220971999|gb|EED90332.1| t-complex protein 1 delta subunit [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 702.975 bits (1813), Expect = 0.000e+0
Identity = 343/497 (69.01%), Postives = 417/497 (83.90%), Query Frame = 0
Query:   56 IRTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPD--TARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAAGGPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPV 550
            IRTSLGPRGMDK++Q   GEV+I+NDGATIL +M+V HP AKMLVE S+SQDIEAGDGTTSVVV AG++L+AC+ LL+KGIHP MIA SF  A+E   E+L+  +KPVDL  RE+LI AV TCLSSKVVSQNSD+LAP+AVD+VL I+ P+   A NVDL D+R+V+QLGGTVDDTELVPG+VF+KG+ K  AGGP+++E AK+ LIQF LSAPKTDM+NNVVVSDYAAMDRILR+ERKYILN+ KKIKKSG NV+L+QKSILRDAYN+LSLHFLAKMDI+V+T++ERTDVEF+ RTLGC PV H+DS TP+KLGSAE V +V +PG  HKVVK  GV NPG T ++L+RGSN+LVL EA+RS+HDA CVVRSLVK+R+LIAGGGAAETE +L L E +    GM ++C  A+A +LEV+PYTLAEN GL PI IVTELR+ HA G  G GI+V +  IS+MYE+ V+QPLLV+ SAI LA+ETVCM++K+DD+V V
Sbjct:   38 IRTSLGPRGMDKLMQLPTGEVLISNDGATILSKMNVLHPAAKMLVECSQSQDIEAGDGTTSVVVFAGALLDACTGLLSKGIHPAMIASSFYKAAETCTELLKKAAKPVDLADRESLIYAVQTCLSSKVVSQNSDLLAPLAVDSVLGILGPNPGEATNVDLRDVRMVEQLGGTVDDTELVPGLVFDKGSTK-TAGGPSQVENAKIALIQFCLSAPKTDMDNNVVVSDYAAMDRILRDERKYILNMCKKIKKSGANVVLIQKSILRDAYNELSLHFLAKMDILVVTDIERTDVEFVCRTLGCTPVPHVDSLTPEKLGSAEHVGDVVLPGSGHKVVKFVGVANPGCTSTVLLRGSNELVLAEANRSVHDAQCVVRSLVKQRYLIAGGGAAETEASLRLRELALETTGMDSHCFKAYADALEVIPYTLAENAGLKPIEIVTELRKAHAEGSTGAGIDVIKGCISEMYEKNVIQPLLVTTSAIKLATETVCMILKVDDIVVV 533          
BLAST of EWM22447.1 vs. NCBI_GenBank
Match: gi|260836973|ref|XP_002613480.1| (hypothetical protein BRAFLDRAFT_119852 [Branchiostoma floridae] >gi|229298865|gb|EEN69489.1| hypothetical protein BRAFLDRAFT_119852 [Branchiostoma floridae])

HSP 1 Score: 692.96 bits (1787), Expect = 0.000e+0
Identity = 329/498 (66.06%), Postives = 419/498 (84.14%), Query Frame = 0
Query:   51 GVADAIRTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAAGGPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLV 548
             V+DAIRTSLGP+GMDKMIQ  +G+V ITNDGATIL QM V HPCAKMLVELSK+QD+EAGDGTTSV V+AGS+L+A + LL KGIHPT I+++FK A+ K+EEIL  ++ PVDL  R++L+ +  T L+SKVVSQ S +LAP+AVDAV+++IDP TA+NVDL DI+++K+LGGT++D+EL+ G+VF++  + GA G P+++EKAK+GLIQF LS PKTDMEN V+VSDY+ MDR+LREER YILNLVK+IKK+GCNVLL+QKSILRDA NDL+LHFLAKM IMV+ ++ER D+EF+ ++LGC P+A +D F PD LG AELV E+ V  GS KVVK+TGVQNPG T+S+++RGSNKLVLEEADRSLHDALCV+R LVKKRFLIAGGGA E E+++ L+ +S+  +GM+AYC+ AFA++LEV+PYTLAEN GLNPI  VTELR  HA G K  GINVR+  I+++ EE V+QPLLVS+SA+ LA+ETV  ++KIDD+V
Sbjct:   36 AVSDAIRTSLGPKGMDKMIQASNGDVTITNDGATILKQMQVLHPCAKMLVELSKAQDVEAGDGTTSVTVIAGSLLDAANKLLQKGIHPTTISEAFKKAAAKSEEILTEIATPVDLADRDSLVKSASTSLNSKVVSQYSSLLAPMAVDAVMRVIDPATAKNVDLKDIKMIKKLGGTIEDSELIDGVVFDQ-KHAGAPGAPSKMEKAKIGLIQFCLSPPKTDMENQVIVSDYSQMDRVLREERAYILNLVKQIKKAGCNVLLIQKSILRDAVNDLALHFLAKMKIMVVKDIEREDIEFVCKSLGCRPIASVDHFQPDMLGQAELVEELQV--GSGKVVKITGVQNPGRTVSVVLRGSNKLVLEEADRSLHDALCVIRCLVKKRFLIAGGGAPEIELSVRLSAYSRTLSGMEAYCIRAFAEALEVIPYTLAENAGLNPIGTVTELRNHHAEGMKTAGINVRKGCITNILEENVIQPLLVSVSAVKLAAETVTQILKIDDIV 530          
BLAST of EWM22447.1 vs. NCBI_GenBank
Match: gi|698811722|ref|XP_009838890.1| (T-complex protein 1, delta subunit [Aphanomyces astaci] >gi|574106183|gb|ETV71702.1| T-complex protein 1, delta subunit [Aphanomyces astaci])

HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0
Identity = 344/495 (69.49%), Postives = 408/495 (82.42%), Query Frame = 0
Query:   57 RTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAA-GGPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPV 550
            RTSLGPRGMDKMIQ+G+GEVII+NDGATIL QM V+HP AKMLV+LSKSQDIEAGDGTTSV V+AG++L+AC DLL KGIHPT I+++F  AS KAE+IL AMS+PVDL  R  LI  V T LSSKV+S+ SD L+PIAVDAVL +ID  TA NVDL D+++VKQLGGT+DD++L+ G+VF KG  K +    PT IE AK+ LIQF LSAPKTDMENNVV++DY+AMDRILREERKYILNL K++KK+G NVLL+QKSILRDA NDLSLHFLAKM I VIT++ER D+E+I  TLGC+PVAHI+S TPDKLG+A LV E ++  G HKVVK+T V  PG TMSIL+RGSNKLVLEEA+RSLHDALCVVRSLVKKRFLI GGGA E EV L L E+ +   G  AYC+ AFA +LEV+PYTLAEN GL+PI IVTELR +HA G+K  GINVR+  IS+MY+  V+QPLLV+ S ISLA+E V M++KIDD+V V
Sbjct:   44 RTSLGPRGMDKMIQQGNGEVIISNDGATILTQMQVYHPTAKMLVDLSKSQDIEAGDGTTSVCVIAGALLSACEDLLEKGIHPTHISEAFGIASIKAEQILTAMSRPVDLANRNELIQCVTTSLSSKVISEYSDRLSPIAVDAVLNVIDIATATNVDLRDVKVVKQLGGTIDDSQLINGLVFSKGFEKTSGVDMPTMIENAKIALIQFCLSAPKTDMENNVVINDYSAMDRILREERKYILNLCKQVKKAGVNVLLIQKSILRDATNDLSLHFLAKMGIHVITDIERNDIEYISTTLGCLPVAHIESLTPDKLGTAGLVQEESL--GGHKVVKITEVVKPGKTMSILVRGSNKLVLEEAERSLHDALCVVRSLVKKRFLICGGGAPEIEVALQLAEYGRTLEGTAAYCLQAFADALEVIPYTLAENAGLHPIGIVTELRAKHAAGDKAAGINVRKGGISNMYDLNVLQPLLVNTSEISLAAECVRMILKIDDIVMV 536          
BLAST of EWM22447.1 vs. NCBI_GenBank
Match: gi|1126183396|ref|XP_019624263.1| (PREDICTED: T-complex protein 1 subunit delta-like [Branchiostoma belcheri])

HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0
Identity = 329/498 (66.06%), Postives = 416/498 (83.53%), Query Frame = 0
Query:   51 GVADAIRTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAAGGPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLV 548
             V+DAIRTSLGP+GMDKMIQ  +G+V ITNDGATIL QM V HPCAKMLVELSK+QD+EAGDGTTSV V+AGS+L+A S LL KGIHPT I+++FK A+ K+EEIL   + PVDL  R++L+ +  T L+SKVVSQ S +LAP+AVDAV+++IDP TA+NVDL DI+++K+LGGT++D+EL+ G+VF++  + GA G P+++EKAK+GLIQF LS PKTDMEN V+VSDY  MDR+LREER YILNLVK+IKK+GCNVLL+QKSILRDA NDL+LHFLAKM IMV+ ++ER ++EF+ ++LGC P+A ID F PD LG AELV E+ V  GS KVVK+TGVQNPG T+S+++RGSNKLVLEEADRSLHDALCV+R LVKKR LIAGGGA E E+++ L+ +S+  +GM+AYC+ AFA++LEV+PYTLAEN GLNPI  VTELR  HA G K  GINVR+  I+++ EE V+QPLLVS+SA+ LA+ETV  ++KIDD+V
Sbjct:   36 AVSDAIRTSLGPKGMDKMIQASNGDVTITNDGATILKQMQVLHPCAKMLVELSKAQDVEAGDGTTSVTVIAGSLLDAASKLLQKGIHPTTISEAFKKAAAKSEEILSETATPVDLADRDSLVKSASTSLNSKVVSQYSSLLAPMAVDAVMRVIDPTTAKNVDLKDIKMIKKLGGTIEDSELIDGVVFDQ-KHAGAPGAPSKMEKAKIGLIQFCLSPPKTDMENQVIVSDYTQMDRVLREERAYILNLVKQIKKAGCNVLLIQKSILRDAVNDLALHFLAKMKIMVVKDIEREEIEFVCKSLGCRPIASIDHFQPDMLGQAELVEELQV--GSGKVVKITGVQNPGRTVSVVLRGSNKLVLEEADRSLHDALCVIRCLVKKRALIAGGGAPEIELSVRLSAYSRTLSGMEAYCIRAFAEALEVIPYTLAENAGLNPIGTVTELRNHHAEGMKTAGINVRKGCITNILEENVIQPLLVSVSAVKLAAETVTQILKIDDIV 530          
BLAST of EWM22447.1 vs. NCBI_GenBank
Match: gi|673039429|ref|XP_008873675.1| (T-complex protein 1, delta subunit [Aphanomyces invadans] >gi|574470456|gb|ETV97466.1| T-complex protein 1, delta subunit [Aphanomyces invadans])

HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0
Identity = 342/495 (69.09%), Postives = 407/495 (82.22%), Query Frame = 0
Query:   57 RTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAAGG-PTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPV 550
            RTSLGPRGMDKMIQ+G+GEVII+NDGATIL QM V+HP AKMLV+LSKSQDIEAGDGTTSV V+AGS+L+AC DLL KGIHPT I+++F  AS KAE+IL AM++PVDL  R+ LI  V T LSSKV+S+ SD L+PIAVDAVL +ID  TA NVDL D+++VKQLGGT+DD++L+ G+VF KG  K +    P  IE AK+ LIQF LSAPKTDMENNVV++DY+AMDRILREERKYILNL K++KK+G NVLL+QKSILRDA NDLSLHFLAKM I VIT++ER D+E+I  TLGC+PVAHI+S T DKLG+A LV E ++  G HKVVK+T V  PG TMSIL+RGSNKLVLEEA+RSLHDALCVVRSLVKKRFLI GGGA E EV L L E+ +   G  AYC+ AFA +LEV+PYTLAEN GL+PI IVTELR +HA G+K  GINVR+  IS+MY+  V+QPLLV+ S ISLA+E V M++KIDD+V V
Sbjct:   43 RTSLGPRGMDKMIQQGNGEVIISNDGATILTQMQVYHPTAKMLVDLSKSQDIEAGDGTTSVCVIAGSLLSACEDLLEKGIHPTHISEAFGIASTKAEQILTAMARPVDLANRDELIQCVTTSLSSKVISEYSDRLSPIAVDAVLNVIDIATATNVDLRDVKVVKQLGGTIDDSQLINGLVFSKGFEKTSGVDLPATIENAKIALIQFCLSAPKTDMENNVVINDYSAMDRILREERKYILNLCKQVKKAGVNVLLIQKSILRDATNDLSLHFLAKMGIHVITDIERNDIEYISTTLGCLPVAHIESLTADKLGTAGLVQEESL--GGHKVVKITEVVKPGKTMSILVRGSNKLVLEEAERSLHDALCVVRSLVKKRFLICGGGAPEIEVALQLAEYGRTLQGTAAYCLQAFADALEVIPYTLAENAGLHPIGIVTELRAKHAAGDKAAGINVRKGGISNMYDLNVLQPLLVNTSEISLAAECVRMILKIDDIVMV 535          
BLAST of EWM22447.1 vs. NCBI_GenBank
Match: gi|301123275|ref|XP_002909364.1| (T-complex protein 1 subunit delta [Phytophthora infestans T30-4] >gi|262100126|gb|EEY58178.1| T-complex protein 1 subunit delta [Phytophthora infestans T30-4])

HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0
Identity = 344/495 (69.49%), Postives = 406/495 (82.02%), Query Frame = 0
Query:   57 RTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAAG-GPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPV 550
            RTSLGPRGMDKMIQ+G+GEVII+NDGATIL QM V+HP AKMLV+LSKSQDIEAGDGTTSV V+AG++L+AC DLL KGIHPT I+++F  A+ KAEEIL  M+KPV+L  RE LI+ V T LSSKV+S+ +D L+PIAVDAVLK+ID  TA NVDLN +R+VKQLGGT+DD+ELV G+VF KG +K AAG  PT IE AK+ LIQF LSAPK DME+NVV++DYAAMDRILREERKYILNL KK+KKSG NVLL+QKSILRDA NDLSLHFLAKM I V+T++ER D+E I  TLGC+PVA+I+  TP+KLG+A LV E TV  G HKVVK+T + NPG TMSIL+RGSNKLVLEEADRSLHDALCVVRSLVKKRFLI GGGA E +V   L  + +   G  +YC+ AFA ++E+VPYTLAEN GL+PI IVTELR +HA G    GINVR+   SDMYE  V+QPLLV+ S ISLA+E V M++KIDD+V V
Sbjct:   40 RTSLGPRGMDKMIQQGNGEVIISNDGATILSQMQVYHPTAKMLVDLSKSQDIEAGDGTTSVCVIAGALLSACEDLLLKGIHPTNISEAFGLAAVKAEEILTEMAKPVELANREELINCVNTSLSSKVISEYADRLSPIAVDAVLKVIDIATATNVDLNTVRVVKQLGGTIDDSELVEGLVFSKGFDKTAAGSAPTTIENAKIALIQFCLSAPKADMESNVVINDYAAMDRILREERKYILNLCKKVKKSGANVLLIQKSILRDATNDLSLHFLAKMGIRVVTDIERNDIEHIATTLGCLPVANIEYLTPEKLGTAGLVQEETV--GGHKVVKITEIVNPGKTMSILVRGSNKLVLEEADRSLHDALCVVRSLVKKRFLICGGGAPEIQVAQKLAAYGRSLEGTASYCLQAFADAMEIVPYTLAENAGLHPIGIVTELRAKHAQGHTSMGINVRKGATSDMYELNVLQPLLVNTSEISLATECVRMILKIDDIVMV 532          
BLAST of EWM22447.1 vs. NCBI_GenBank
Match: gi|669164670|ref|XP_008617897.1| (T-complex protein 1 subunit delta [Saprolegnia diclina VS20] >gi|530730463|gb|EQC28705.1| T-complex protein 1 subunit delta [Saprolegnia diclina VS20])

HSP 1 Score: 686.026 bits (1769), Expect = 0.000e+0
Identity = 341/495 (68.89%), Postives = 409/495 (82.63%), Query Frame = 0
Query:   57 RTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAA-GGPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPV 550
            RTSLGPRGMDKMIQ+G+GEVII+NDGATIL QM V+HP AKMLV+LSKSQDIEAGDGTTSV V+AG++L+AC DLL KGIHP+ I+++F  A+ KA+EIL AMS+PVDL  R+ LI  V T LSSKV+S+ SD L+PIAVDAVL +ID  TA NVDL D+++VKQLGGT+DD++L+ G+VF KG  K +    PT I  AK+ LIQF LSAPKTDMENNVV++DY+AMDRILREERK+ILNL K+IKK+G NVLL+QKSILRDA +DLSLHFLAKM I VIT++ERTDVE+I  TLGC+PVAHI+S TP+KLG+A LV E ++  G HKVVK+T V  PG TMSIL+RGSNKLVLEEA+RSLHDALCVVRSLVKKRFLI GGGA E EV L L E+ +   G  AYC+ AFA +LEV+PYTLAEN GL+PI +VTELR +HA G+K  GINVR+  IS+MYE  ++QPLLV+ S ISLASE V M++KIDD+V V
Sbjct:   43 RTSLGPRGMDKMIQQGNGEVIISNDGATILTQMQVYHPTAKMLVDLSKSQDIEAGDGTTSVCVIAGALLSACEDLLQKGIHPSHISEAFGLAATKADEILTAMSRPVDLNNRDELIKCVTTSLSSKVISEYSDRLSPIAVDAVLNVIDIATAVNVDLRDVKVVKQLGGTIDDSQLINGLVFSKGFEKSSGVDMPTTIANAKIALIQFCLSAPKTDMENNVVINDYSAMDRILREERKFILNLCKQIKKAGVNVLLIQKSILRDATSDLSLHFLAKMGIHVITDIERTDVEYISTTLGCLPVAHIESLTPEKLGTAGLVQEESL--GGHKVVKITEVVRPGKTMSILVRGSNKLVLEEAERSLHDALCVVRSLVKKRFLICGGGAPEIEVALRLGEYGRTLEGTAAYCLQAFADALEVIPYTLAENAGLHPIGMVTELRAKHAAGDKAAGINVRKGTISNMYELNILQPLLVNTSEISLASECVRMILKIDDIVMV 535          
BLAST of EWM22447.1 vs. NCBI_GenBank
Match: gi|908429816|ref|XP_013075466.1| (PREDICTED: T-complex protein 1 subunit delta-like isoform X2 [Biomphalaria glabrata])

HSP 1 Score: 685.256 bits (1767), Expect = 0.000e+0
Identity = 335/502 (66.73%), Postives = 417/502 (83.07%), Query Frame = 0
Query:   51 GVADAIRTSLGPRGMDKMIQRGDGEVIITNDGATILGQMSVFHPCAKMLVELSKSQDIEAGDGTTSVVVLAGSMLNACSDLLAKGIHPTMIADSFKAASEKAEEILQAMSKPVDLRARETLIDAVVTCLSSKVVSQNSDILAPIAVDAVLKIIDPDTARNVDLNDIRIVKQLGGTVDDTELVPGIVFEKGANKGAAGGPTRIEKAKVGLIQFHLSAPKTDMENNVVVSDYAAMDRILREERKYILNLVKKIKKSGCNVLLVQKSILRDAYNDLSLHFLAKMDIMVITEVERTDVEFIQRTLGCMPVAHIDSFTPDKLGSAELVTEVTVPGGSHKVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPVAR 552
             VADAIRTSLGPRGMDKMIQ  +G+V ITNDGATIL QM V HP AKMLVELSK+QDIEAGDGTTSVVVLAGS L+A ++LLA+GIHPT+I+++F+ A+ K+ EIL++M  P+DL  RE+L+ +  T L+SKVVSQ S IL+PIAVDAV+K+IDP TA+NVDL DI+IVK+LGGTV+DTEL+ G+VF   +   +AGGPT++EKAKVGLIQF +S PKTDM+N V+VSDY  MDR+LREER YIL +VKKIKK+GCNVLL+QKSILRDA +DL+LHFLAKM I+V+ +VER DVEF+ +TLGC P+A +D F P+ LG+AELV EV    GS K+VK+TG+ NPG T+++LIRGSNKLVLEEADRSLHDALCV+R LVKKR LIAGGGA E E++L L E++    G++ YC  AFA++LEV+P+TLAEN GLNPIA VTELR RHA GE+  GINVR+  I+++ EE VVQP+LV++SAI+LA+ETV  ++KIDD+V   R
Sbjct:   38 AVADAIRTSLGPRGMDKMIQAANGDVTITNDGATILKQMQVLHPAAKMLVELSKAQDIEAGDGTTSVVVLAGSFLDASANLLARGIHPTVISEAFQRAAVKSTEILESMVTPLDLSDRESLLKSASTSLNSKVVSQYSSILSPIAVDAVMKVIDPITAKNVDLKDIKIVKKLGGTVEDTELIEGLVF--SSKTLSAGGPTKVEKAKVGLIQFCISPPKTDMDNQVIVSDYTQMDRVLREERAYILEIVKKIKKAGCNVLLIQKSILRDAVSDLALHFLAKMKILVVKDVEREDVEFVCKTLGCRPIASVDHFLPEYLGTAELVEEVQ--AGSGKIVKITGIANPGQTVTVLIRGSNKLVLEEADRSLHDALCVIRCLVKKRALIAGGGAPEIELSLKLMEYANTLTGIEQYCFRAFAEALEVIPFTLAENAGLNPIATVTELRTRHARGERTAGINVRKGAITNILEESVVQPILVTVSAINLAAETVRSILKIDDIVNCVR 535          
The following BLAST results are available for this feature:
BLAST of EWM22447.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102953|gb|EWM22447.1|0.000e+0100.00t-complex protein 1 subunit delta [Nannochloropsis... [more]
gi|298706489|emb|CBJ29476.1|0.000e+074.11conserved unknown protein [Ectocarpus siliculosus][more]
gi|224006794|ref|XP_002292357.1|0.000e+069.01t-complex protein 1 delta subunit [Thalassiosira p... [more]
gi|260836973|ref|XP_002613480.1|0.000e+066.06hypothetical protein BRAFLDRAFT_119852 [Branchiost... [more]
gi|698811722|ref|XP_009838890.1|0.000e+069.49T-complex protein 1, delta subunit [Aphanomyces as... [more]
gi|1126183396|ref|XP_019624263.1|0.000e+066.06PREDICTED: T-complex protein 1 subunit delta-like ... [more]
gi|673039429|ref|XP_008873675.1|0.000e+069.09T-complex protein 1, delta subunit [Aphanomyces in... [more]
gi|301123275|ref|XP_002909364.1|0.000e+069.49T-complex protein 1 subunit delta [Phytophthora in... [more]
gi|669164670|ref|XP_008617897.1|0.000e+068.89T-complex protein 1 subunit delta [Saprolegnia dic... [more]
gi|908429816|ref|XP_013075466.1|0.000e+066.73PREDICTED: T-complex protein 1 subunit delta-like ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8205rna8205Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications