EWM22497.1, cds8178 (CDS) Nannochloropsis gaditana

Overview
NameEWM22497.1
Unique Namecds8178
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:77883..79508 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22497.1
Producttyrosyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100011g15.3497.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:77883..79508 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006418tRNA aminoacylation for protein translation
GO:0006437tyrosyl-tRNA aminoacylation
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003723RNA binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004831tyrosine-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR024107Tyr-tRNA-ligase_bac_1
IPR024088Tyr-tRNA-ligase_bac-type
IPR002942S4_RNA-bd
IPR014729Rossmann-like_a/b/a_fold
IPR002305aa-tRNA-synth_Ic
IPR002307Tyr-tRNA-ligase
Homology
BLAST of EWM22497.1 vs. NCBI_GenBank
Match: gi|585103003|gb|EWM22497.1| (tyrosyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1113.98 bits (2880), Expect = 0.000e+0
Identity = 541/541 (100.00%), Postives = 541/541 (100.00%), Query Frame = 0
Query:    1 MEKEKSLRTLRRQHSQSKISRAVPFSKIVESPRVSSRHRAKRRLKDSLFFICGVMVFLAIGSKASTIQQSSTPLCAFAARLSLQRPIVSHRINLRSPQRSRLTALSSNAEPATASANQAIPTDFESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGDGATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFDKPEIMLSAGKKKHGMVELSG 541
            MEKEKSLRTLRRQHSQSKISRAVPFSKIVESPRVSSRHRAKRRLKDSLFFICGVMVFLAIGSKASTIQQSSTPLCAFAARLSLQRPIVSHRINLRSPQRSRLTALSSNAEPATASANQAIPTDFESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGDGATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFDKPEIMLSAGKKKHGMVELSG
Sbjct:    1 MEKEKSLRTLRRQHSQSKISRAVPFSKIVESPRVSSRHRAKRRLKDSLFFICGVMVFLAIGSKASTIQQSSTPLCAFAARLSLQRPIVSHRINLRSPQRSRLTALSSNAEPATASANQAIPTDFESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGDGATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFDKPEIMLSAGKKKHGMVELSG 541          
BLAST of EWM22497.1 vs. NCBI_GenBank
Match: gi|299472939|emb|CBN77340.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 588.571 bits (1516), Expect = 0.000e+0
Identity = 283/442 (64.03%), Postives = 354/442 (80.09%), Query Frame = 0
Query:  101 RLTALSSN--AEPAT--ASANQAIPTDFESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGDGATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFD-KPEIMLSAGKKKHGMV 537
            RL A+ S   A PA+  A AN+A+    ES FLQTL  RG+ HQCT+ + LDE   AG+ + AYLGFDATA SLHVGSLLQIMILRHLQK+GH+P+VL+GGGTTK+GDPSGKDEAR+L+    IQ NI  ++ VF +FL FGDG TDA LVNN+EWL+ L YLDFLR+YG HFTINRM+ ++SV++RL+RE PL+FLEFNYM+LQAYDF EL RRY   LQ+GGSDQWGN++NGV+L R+V+   LF LTAPL+TTS+GKKMGK+A+GA+WL  E L EYDYWQFWRNT+DADV RFLKLFTE+ +++I +L +L GAGINEAK++LADE TKLLHGE CLKEIH TV  +FAGG     AALPR  +  +E  +AG+ V +LF+RL+LAK+K+E RRLIKGGGA+LN ++I +E FVV + +FD K E+ LS+GKK+HG++
Sbjct:   83 RLLAVESETVAVPASVMAEANEAVSV--ESPFLQTLVERGFYHQCTNVEGLDEKLRAGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDEARQLLDDAAIQRNIDGLASVFSKFLTFGDGPTDAKLVNNNEWLNQLSYLDFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSAAGAIWLNAEKLPEYDYWQFWRNTDDADVIRFLKLFTELSMDEILKLEQLTGAGINEAKIVLADETTKLLHGEACLKEIHQTVKQVFAGGVGGSNAALPRAKIESAE-AEAGMAVVDLFIRLELAKTKSEVRRLIKGGGAKLNDQKIVDEGFVVDLSTFDGKDELKLSSGKKRHGII 521          
BLAST of EWM22497.1 vs. NCBI_GenBank
Match: gi|1210512067|dbj|GAX28922.1| (tyrosyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 572.778 bits (1475), Expect = 0.000e+0
Identity = 281/419 (67.06%), Postives = 338/419 (80.67%), Query Frame = 0
Query:  124 FESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGD-GATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARL-NGEQIKEETFVVTVDSF-DKPEIMLSAGKKKHGMVEL 539
             +S FLQTL  RG++HQCT    LD     G   AAYLGFDATA SLHVGSLLQIMILRHLQKSGHKP+VL+GGGTTKVGDP+GKDE+R ++T E IQ NI  IS VF++FL FGD   TDA++VNND+WLS L+YL FLRDYG HFTINRML+FESVK RL RE+PLSFLEFNYMILQAYDFLEL RRY   LQLGGSDQWGN+++G EL R+++G  LF LTAPLMTTSDGKKMGKTA+GAVWL    LSEYDYWQFWRNT D DV +FLKLFTE+PLE+I EL +L+GA IN+AK++LADEAT LLHG+ECL  IH TV  +FA GS E T +LPRVVV  ++L + G+++A++FV L LA +K EARRLI+GGGARL + +++++E+ ++T+  F D  EI L AGKK+ G+VEL
Sbjct:   76 IKSPFLQTLRDRGFLHQCTGISELDAKLCEGTQ-AAYLGFDATADSLHVGSLLQIMILRHLQKSGHKPIVLVGGGTTKVGDPTGKDESRAMLTEEAIQKNIEGISSVFQKFLVFGDENRTDAMIVNNDDWLSELKYLQFLRDYGTHFTINRMLSFESVKQRLAREAPLSFLEFNYMILQAYDFLELYRRYNTILQLGGSDQWGNMVSGTELGRRIEGAQLFALTAPLMTTSDGKKMGKTANGAVWLNSSKLSEYDYWQFWRNTADDDVVKFLKLFTELPLEQIAELEKLQGADINKAKIVLADEATALLHGKECLPVIHETVKTMFA-GSGESTESLPRVVVETTDL-EKGMRLADIFVDLGLASTKKEARRLIQGGGARLGDSKKVEDESAMLTLADFGDAKEITLRAGKKRAGVVEL 491          
BLAST of EWM22497.1 vs. NCBI_GenBank
Match: gi|1210525149|dbj|GAX16083.1| (tyrosyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 568.926 bits (1465), Expect = 0.000e+0
Identity = 280/419 (66.83%), Postives = 336/419 (80.19%), Query Frame = 0
Query:  124 FESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGD-GATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARL-NGEQIKEETFVVTVDSF-DKPEIMLSAGKKKHGMVEL 539
             +S FLQTL  RG++HQCT    LD     G   AAYLGFDATA SLHVGSLLQIMILRHLQKSGHKP+VL+GGGTTKVGDP+GKDE+R ++T E IQ NI  IS VF++FL FGD   TDA+ VNND+WLS L+YL FLRDYG HFTINRML+FESVK RL RE+PLSFLEFNYMILQAYDFLEL RRY   LQLGGSDQWGN+++G EL R+++G  LF LTAPLMTTSDGKKMGKTA+GAVWL    LSEYDYWQFWRNT D DV +FLKLFTE+PLE+I EL +L+GA IN+AK++LADEAT LLHG+ECL  IH TV  +FA GS E T +LPRVVV  ++L + G+++A++FV L LA +K EARRLI+GGGARL + +++++E+ ++T+  F D  EI L AGKK+ G+VE 
Sbjct:   76 IKSPFLQTLRDRGFLHQCTGITELDAKLCEGTQ-AAYLGFDATADSLHVGSLLQIMILRHLQKSGHKPIVLVGGGTTKVGDPTGKDESRAMLTEEAIQKNIEGISSVFQKFLVFGDTNPTDAVTVNNDDWLSELKYLQFLRDYGTHFTINRMLSFESVKQRLAREAPLSFLEFNYMILQAYDFLELYRRYNTILQLGGSDQWGNMVSGTELGRRIEGAQLFALTAPLMTTSDGKKMGKTANGAVWLNSSKLSEYDYWQFWRNTADDDVVKFLKLFTELPLEQIAELEKLQGADINKAKIVLADEATALLHGKECLPVIHETVKTMFA-GSGESTESLPRVVVKATDL-EKGMRLADIFVDLGLASTKKEARRLIQGGGARLGDSKKLEDESAMLTLADFGDSKEITLRAGKKRAGVVEF 491          
BLAST of EWM22497.1 vs. NCBI_GenBank
Match: gi|551673999|ref|XP_005839755.1| (Tyrosyl-tRNA synthetase [Guillardia theta CCMP2712] >gi|428183918|gb|EKX52775.1| Tyrosyl-tRNA synthetase [Guillardia theta CCMP2712])

HSP 1 Score: 566.614 bits (1459), Expect = 0.000e+0
Identity = 264/419 (63.01%), Postives = 336/419 (80.19%), Query Frame = 0
Query:  123 DFESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGDGATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAG--GSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFDKPEIMLSAGKKKHGMVEL 539
            D +S F++ +  RG++H CT+ +ALDE   + + + AYLGFDATA SLHVGSLLQIMILRHLQ+ GHKP+VL+GGGTTKVGDP+GKD++RK+++ + IQ N+  I  VF +FL FGDG TDALLVNNDEWLS +RYLDFLR+YG  FTINRMLNFESVK+RL+RESPL+FLEFNYMILQAYDFLEL+RRY   LQLGGSDQWGN++NGVEL R+ + + +F +TAPL+TTSDGKKMGK+  GAVWL  ++L  YDYWQFWRNT DADV RFLKLFTE+P+EKIEEL++LEGA IN+AK ILADE T++LHGEE L  IH T + LFAG  G+ +D   LP+V ++K ++ D G+ + +LF++L  A SK E R+LI+GGG RLN E++++   ++T D+ +  +  LS GKKKHG+V L
Sbjct:   81 DGKSKFIKVMMERGFLHSCTNIEALDEKMTS-ETVKAYLGFDATAKSLHVGSLLQIMILRHLQQCGHKPIVLLGGGTTKVGDPTGKDQSRKMLSDQDIQDNVNGIKTVFEKFLKFGDGPTDALLVNNDEWLSSIRYLDFLREYGPLFTINRMLNFESVKLRLERESPLTFLEFNYMILQAYDFLELNRRYGCSLQLGGSDQWGNMVNGVELTRRANSKQVFAMTAPLITTSDGKKMGKSEGGAVWLNADMLPPYDYWQFWRNTQDADVVRFLKLFTELPMEKIEELSKLEGAAINDAKKILADECTRMLHGEEVLPSIHETASALFAGKSGNLDD---LPKVSISKEDV-DKGIPLIDLFLQLGFASSKNEIRKLIQGGGVRLNDEKVQDVNMMLTADALNNNQAKLSVGKKKHGLVVL 494          
BLAST of EWM22497.1 vs. NCBI_GenBank
Match: gi|551674001|ref|XP_005839756.1| (tyrosyl-tRNA synthetase [Guillardia theta CCMP2712] >gi|428183919|gb|EKX52776.1| tyrosyl-tRNA synthetase [Guillardia theta CCMP2712])

HSP 1 Score: 565.844 bits (1457), Expect = 0.000e+0
Identity = 264/419 (63.01%), Postives = 336/419 (80.19%), Query Frame = 0
Query:  123 DFESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGDGATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAG--GSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFDKPEIMLSAGKKKHGMVEL 539
            D +S F++ +  RG++H CT+ +ALDE   + + + AYLGFDATA SLHVGSLLQIMILRHLQ+ GHKP+VL+GGGTTKVGDP+GKD++RK+++ + IQ N+  I  VF +FL FGDG TDALLVNNDEWLS +RYLDFLR+YG  FTINRMLNFESVK+RL+RESPL+FLEFNYMILQAYDFLEL+RRY   LQLGGSDQWGN++NGVEL R+ + + +F +TAPL+TTSDGKKMGK+  GAVWL  ++L  YDYWQFWRNT DADV RFLKLFTE+P+EKIEEL++LEGA IN+AK ILADE T++LHGEE L  IH T + LFAG  G+ +D   LP+V ++K ++ D G+ + +LF++L  A SK E R+LI+GGG RLN E++++   ++T D+ +  +  LS GKKKHG+V L
Sbjct:   24 DGKSKFIKVMMERGFLHSCTNIEALDEKMTS-ETVKAYLGFDATAKSLHVGSLLQIMILRHLQQCGHKPIVLLGGGTTKVGDPTGKDQSRKMLSDQDIQDNVNGIKTVFEKFLKFGDGPTDALLVNNDEWLSSIRYLDFLREYGPLFTINRMLNFESVKLRLERESPLTFLEFNYMILQAYDFLELNRRYGCSLQLGGSDQWGNMVNGVELTRRANSKQVFAMTAPLITTSDGKKMGKSEGGAVWLNADMLPPYDYWQFWRNTQDADVVRFLKLFTELPMEKIEELSKLEGAAINDAKKILADECTRMLHGEEVLPSIHETASALFAGKSGNLDD---LPKVSISKEDV-DKGIPLIDLFLQLGFASSKNEIRKLIQGGGVRLNDEKVQDVNMMLTADALNNNQAKLSVGKKKHGLVVL 437          
BLAST of EWM22497.1 vs. NCBI_GenBank
Match: gi|219118843|ref|XP_002180188.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408445|gb|EEC48379.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0
Identity = 271/418 (64.83%), Postives = 331/418 (79.19%), Query Frame = 0
Query:  124 FESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGD-GATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSF-DKPEIMLSAGKKKHGMVEL 539
             +S FLQT+  RG++HQCT+ + LD     G P AAYLGFDATA SLHVGSLLQIMILRHLQ+SGH+P+VL+GGGT+KVGDP+GKDE+R L+T E IQ N   IS+VF++FL FGD   TDA++VNNDEWLS ++YLDFLR YG HFTINRML+FESVK RL RE+P SFLEFNYMILQAYDFLEL RR++  LQLGGSDQWGN+I+G EL RK++   LF LTAPL+TTSDGKKMGKTA+GAVWL    LS YDYWQFWRNT+DADV RFLKLFTE+PL+K+ EL +L+GA IN+AK++LADEAT LLHG + L+ IH T+  +FAGG + DT +LPRV  +K++L   GV+  +L V+L LA SK EARRLI+GGGARL    I +E  V+ +  F    E+ L AGKK+ G+VE+
Sbjct:   71 LQSEFLQTMRDRGFLHQCTNIRDLDAKLCEG-PQAAYLGFDATADSLHVGSLLQIMILRHLQRSGHRPVVLIGGGTSKVGDPTGKDESRVLLTDEIIQQNTDGISKVFQQFLTFGDEKPTDAIMVNNDEWLSEIKYLDFLRTYGTHFTINRMLSFESVKQRLTREAPFSFLEFNYMILQAYDFLELYRRHKTILQLGGSDQWGNMISGTELGRKLESAQLFALTAPLITTSDGKKMGKTANGAVWLNAARLSSYDYWQFWRNTDDADVIRFLKLFTELPLDKVAELEKLQGAEINQAKIVLADEATALLHGSDSLEAIHKTIETMFAGGGS-DTESLPRVYASKTDLETNGVRFLDLLVKLKLANSKKEARRLIQGGGARLGETPIADENGVLILTDFGGATEVTLRAGKKRAGVVEI 486          
BLAST of EWM22497.1 vs. NCBI_GenBank
Match: gi|873232412|emb|CEM05568.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 279/468 (59.62%), Postives = 349/468 (74.57%), Query Frame = 0
Query:   76 AFAARLSLQRPIVSHRINLR--SPQRSRLTALSSNAEPATASANQAIPTDFESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGDGATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDA-GVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFD-KPEIMLSAGKKKHGMVEL 539
             F  R S  +P+ + R   R  +PQ S  TA+  +  PA A A     T + S FL+TL  RG+I+Q TD + LDE  +  + ++AYLGFDATA SLHVGSL+QIMILRHLQ+ GHKP+VL+GGGTTKVGDPSGKDEAR +++ E I  NI SI+ +FR+FL+FGDG TDA+LVNND+WLS L YL FLRD+G  F++N ML  ESVK RLDRE PLSFLEFNYMILQAYDFLEL RRY  RLQ+GGSDQWGNI+ GVEL  ++    +FGLTAPL+TTSDGKKMGKTA GAVWL  + LS YDYWQFWRNT+DAD  RFLKLFTEVP+++I ELA+L+GA IN+AK++LADEAT LLHG   L  IH  VA++F       T +LPR+ V++ +L    GV++ EL  +LD AK+K++ARRLI GGGARLN  ++ +   V+ +  F+   ++ LSAGKKKHG+V+L
Sbjct:   24 GFVLRPSSHQPLSACRQRWRRPAPQMSADTAV--DQSPAVAEAKG--ETSYRSKFLRTLHERGFIYQGTDLQHLDELMSQ-ETVSAYLGFDATADSLHVGSLVQIMILRHLQQCGHKPVVLLGGGTTKVGDPSGKDEARAMLSEEAIDSNIQSIAAIFRKFLSFGDGPTDAMLVNNDDWLSGLSYLCFLRDFGSCFSVNAMLRRESVKSRLDREQPLSFLEFNYMILQAYDFLELHRRYGVRLQMGGSDQWGNIVQGVELNARMGSEKVFGLTAPLITTSDGKKMGKTAEGAVWLTADKLSPYDYWQFWRNTDDADTIRFLKLFTEVPMDQIAELAQLQGADINQAKIVLADEATGLLHGRAALPAIHQAVASVFNTKGQGSTDSLPRLHVSEGQLASQEGVRLVELLQQLDFAKTKSDARRLILGGGARLNDAKVDDVNRVLVLGDFNGGSQVKLSAGKKKHGIVQL 486          
BLAST of EWM22497.1 vs. NCBI_GenBank
Match: gi|224013912|ref|XP_002296620.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968972|gb|EED87316.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0
Identity = 264/414 (63.77%), Postives = 331/414 (79.95%), Query Frame = 0
Query:  135 RGYIHQCTDFKALD----EACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGDGATD-ALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTED--TAALPRVVVTKSEL-GDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFD-KPEIMLSAGKKKHGMVEL 539
            RG++ QCT+   LD    EA +  + ++AYLGFDATA SLHVGSLLQIMILRHLQ+SGH+P+VL+GGGT+KVGDP+GKDE+R ++  + I+ N   IS+VF++FL FG+ + + A++VNNDEWLS L+YL FLRDYG HFTINRM++FESVK RL RE+P SFLEFNYMILQAYDFLEL+RRY A+LQLGGSDQWGN+I+G EL R+VDG+ L+ LTAPL+TTSDGKKMGKTA GAVWL  + LSEYDYWQFWRNT+D DV RFLKLFTE+ LE+IE++A  +GA IN+AKV+LADEAT LLHG ECL  IH T+  +F GG + +  T  L R+ V++ EL    GV+V +LFV+L LA SK EARRL++GGGA+L  E+I++E  V+  D FD K E+ L AGKK+ G+VEL
Sbjct:    4 RGFLFQCTNLSELDALLTEATSKNEAVSAYLGFDATADSLHVGSLLQIMILRHLQQSGHRPIVLIGGGTSKVGDPTGKDESRIMLNDDIIKKNTDGISQVFQKFLTFGEKSVEEAIMVNNDEWLSDLKYLQFLRDYGTHFTINRMMSFESVKQRLAREAPFSFLEFNYMILQAYDFLELNRRYNAQLQLGGSDQWGNMISGCELGRRVDGKQLYALTAPLITTSDGKKMGKTAGGAVWLNADKLSEYDYWQFWRNTSDEDVIRFLKLFTELSLEEIEKMAEWQGADINKAKVVLADEATALLHGRECLAAIHDTIDTMFKGGKSAEASTEGLARIFVSEDELNAKDGVKVIDLFVKLGLASSKKEARRLVQGGGAKLGEEKIEDEFAVIAKDDFDEKNELTLRAGKKRAGVVEL 417          
BLAST of EWM22497.1 vs. NCBI_GenBank
Match: gi|397605407|gb|EJK59000.1| (hypothetical protein THAOC_20835 [Thalassiosira oceanica])

HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0
Identity = 269/443 (60.72%), Postives = 338/443 (76.30%), Query Frame = 0
Query:  105 LSSNAEPATASANQAIPTDFESSFLQTLSARGYIHQCTDFKALDE----ACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGD-GATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGST--EDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSF-DKPEIMLSAGKKKHGMVEL 539
            + +++  +  S  +   ++ +S FL+T+  RG++ QCT+   LDE    A A G+ ++AYLGFDATA SLHVGSLLQIMILRHLQ+SGH+P+VL+GGGT+KVGDP+GKDE+R +MT + I  N A IS+VF +FL FGD G TDA++VNND+WLS L+YL FLRDYG HFTINRM++FESVK RL RE+P SFLEFNYMILQAYDFLEL RR+ A+LQLGGSDQWGN+I+G EL R+VDG  L+ LTAPL+TTSDGKKMGKTA GA+WL  + LSEYDYWQFWRNT D DV RFLKLFTE+ L +IE++    GA IN+AK++LADEAT LLHG + LK IH T+ ++F GG +    T  L R+ VT  E  + GV+  +LFV+L LA SK EARRLI+GGGARL  E+I +E   +  + F D  E+ L AGKK+ G+VEL
Sbjct:   95 IDASSGASQVSDEEETLSNLKSPFLRTMRDRGFLFQCTNLADLDELLEDATAKGESVSAYLGFDATADSLHVGSLLQIMILRHLQRSGHRPIVLIGGGTSKVGDPTGKDESRVMMTDDIIAKNTAGISKVFEKFLKFGDEGTTDAIMVNNDDWLSGLKYLQFLRDYGTHFTINRMMSFESVKQRLAREAPFSFLEFNYMILQAYDFLELHRRHGAKLQLGGSDQWGNMISGCELGRRVDGAQLYALTAPLITTSDGKKMGKTAGGAMWLNADRLSEYDYWQFWRNTADDDVIRFLKLFTELDLAEIEKMEGWTGAEINKAKIVLADEATALLHGRDSLKAIHDTIDSMFKGGKSAAASTEGLARIFVTSDEAAE-GVKYLDLFVKLGLAGSKKEARRLIQGGGARLGEEKISDEFGTLGTEDFGDGNEVTLRAGKKRAGVVEL 536          
The following BLAST results are available for this feature:
BLAST of EWM22497.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103003|gb|EWM22497.1|0.000e+0100.00tyrosyl-trna synthetase [Nannochloropsis gaditana][more]
gi|299472939|emb|CBN77340.1|0.000e+064.03conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210512067|dbj|GAX28922.1|0.000e+067.06tyrosyl-tRNA synthetase [Fistulifera solaris][more]
gi|1210525149|dbj|GAX16083.1|0.000e+066.83tyrosyl-tRNA synthetase [Fistulifera solaris][more]
gi|551673999|ref|XP_005839755.1|0.000e+063.01Tyrosyl-tRNA synthetase [Guillardia theta CCMP2712... [more]
gi|551674001|ref|XP_005839756.1|0.000e+063.01tyrosyl-tRNA synthetase [Guillardia theta CCMP2712... [more]
gi|219118843|ref|XP_002180188.1|0.000e+064.83predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|873232412|emb|CEM05568.1|0.000e+059.62unnamed protein product [Vitrella brassicaformis C... [more]
gi|224013912|ref|XP_002296620.1|0.000e+063.77predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|397605407|gb|EJK59000.1|0.000e+060.72hypothetical protein THAOC_20835 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8202rna8202Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications