EWM22413.1, cds8177 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|585102919|gb|EWM22413.1| (Heat shock chaperonin-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 856.284 bits (2211), Expect = 0.000e+0 Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0 Query: 1 MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGDQSQTQSANSSSSSSSSSSSSSSSSSSSSSTTYSDGKEKGGGETKAAKVDEATRHSEVLAEVMKLKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEVKRMPREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGGFADAFFRQAGGAGGARGSPFGGGGFGGMPGMGGVDPSMLASIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSLFKK 427 MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGDQSQTQSANSSSSSSSSSSSSSSSSSSSSSTTYSDGKEKGGGETKAAKVDEATRHSEVLAEVMKLKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEVKRMPREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGGFADAFFRQAGGAGGARGSPFGGGGFGGMPGMGGVDPSMLASIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSLFKK Sbjct: 1 MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGDQSQTQSANSSSSSSSSSSSSSSSSSSSSSTTYSDGKEKGGGETKAAKVDEATRHSEVLAEVMKLKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEVKRMPREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGGFADAFFRQAGGAGGARGSPFGGGGFGGMPGMGGVDPSMLASIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSLFKK 427
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|553179895|ref|XP_005852782.1| (hypothetical protein NGA_0682300, partial [Nannochloropsis gaditana CCMP526] >gi|422295752|gb|EKU23051.1| hypothetical protein NGA_0682300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 319.701 bits (818), Expect = 2.940e-106 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 Query: 1 MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGD 156 MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGD Sbjct: 1 MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGD 156
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|1210517620|dbj|GAX23535.1| (hypothetical protein FisN_14Hh289 [Fistulifera solaris]) HSP 1 Score: 112.079 bits (279), Expect = 4.253e-24 Identity = 105/347 (30.26%), Postives = 155/347 (44.67%), Query Frame = 0 Query: 89 AAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGDQSQTQSANSSSSSSSSSSSSSSSSSSSSSTTYSDGKEKGGGETKAAKVDEATRHSEVLAEVMKLKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEVKRM----PREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGGFADAFFRQAGGAGGARGSPFGG----GGFGGMPGMGGVDPSMLA---SIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSL 424 A +L I+ M+ EIK ELE G+ LEK E ++ L AR +G+T P V + S+ + S Q+ +S S R E + ++ +K SE+KKEL+ L + SFFEK+EF +ALA AR++ V +E ++Y VEV PR G + + G G G G+ GG +D+ G G A G FA+ A GGA +PFGG GG G P GGVDP A +M +P+ Q +AQ NP +M + + M++P +KY ND +++ ++ EL+ Sbjct: 49 ATDLPMIETMRAGEIKKELESYGISTVSFLEKSELVNALTKARAEGLT---PKVSSASTSSTSSTTSNTSSKQTDTTSGKPRSE------------------------------------RIREEMEKLQSMKASEMKKELEELGVSTKSFFEKQEFMKALAEARVD---------GVKNEESYAEYTNVEVLTDEFSGPRPKGQQSPSSYG--GPVDGPGSVGGMGIADILKNMGAGGA--GRGPFANGNVGNASPFGGA--NPFGGANPFGGKGSSP-FGGVDPGSFARAQKMMKDPKVQQIIAKAQSNPAIMKKINECMSSPAAFAKYQNDPDVADLIKELRKF 340
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|1210530816|dbj|GAX10767.1| (hypothetical protein FisN_14Lh289 [Fistulifera solaris]) HSP 1 Score: 102.834 bits (255), Expect = 4.747e-21 Identity = 111/353 (31.44%), Postives = 166/353 (47.03%), Query Frame = 0 Query: 89 AAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGDQSQTQSANSSSSSSSSSSSSSSSSSSSSSTTYSDGKEKGGGETKAAKVDEATRHSEVLAEVMKLKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEVKRM----PREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGGFADAFFRQAGGAGGARGSPFGGGG-FGG---------MPGMGGVDPSMLA---SIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSL 424 A +L I+ M+ EIK ELE G+ LEK E ++ L AR +G+T +S+++SSSS+SS++S++SS T + GK + + R E + ++ +K SE+KKEL+ L + SFFEK+EF +ALA AR++ V +E ++Y VEV PR G + + G G G G+ GG +D+ G G A G FA+ G G A SPFGG FGG GGVDP A +M +P+ Q +AQ NP +M + + M+NP +KY ND +++ ++ EL+ Sbjct: 6 ATDLPMIETMRAGEIKKELESYGISTVSFLEKSELVNALTKARAEGLTP---------------------------KASATTSSSSTSSTTSNTSSKQTDASGKPR------------SERIQEEMEKLQSMKASEMKKELEELGVSTKSFFEKQEFMKALAEARVD---------GVKKEESYAEYTNVEVLTDEFSGPRPKGQQSPSSYG--GPVDGPGSVGGMGIADILKNMGAGGA--GRGPFAN------GNVGNA--SPFGGANPFGGANPFGGKGGGSPFGGVDPGSFAKAQKMMKDPKVQQIIAKAQSNPAIMKKINECMSNPAAFAKYQNDPDVADLIKELRKF 298
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|219116881|ref|XP_002179235.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409126|gb|EEC49058.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 80.4925 bits (197), Expect = 5.602e-13 Identity = 81/242 (33.47%), Postives = 111/242 (45.87%), Query Frame = 0 Query: 204 VDEATR-HSEVLAEVMK----LKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEV----KRMPREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGG----------FADAFFRQAGGAGGARG-SPFGGGGFGGMPGMGGVDPSMLASIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSLF 425 V E TR E L E M+ +K E+KKEL+ I SFFEK EF +ALA AR++ S VD E ++Y VEV PR+G + GGG+PF D A SGS G + G G A G +PFGG G G G +MSNP+ + +AQ NP +M +Q+ M+NP ++KY ND E++ ++ EL++L Sbjct: 137 VAEDTRPRQERLVEEMQKCETMKAGELKKELEERGISTKSFFEKSEFVKALAEARVDGVEKKS----VD-SEGYAEYAEVEVLTDESSGPRQGKSQI----------QPPSPGGGNPFGD--------AGSGSSGNPFGGSMGGMGGIGDMLKNMGMGGSAAGANPFGGMGGMSGMGGMGDVMGKAQQMMSNPKVRELMVKAQSNPSIMKKMQECMSNPAALAKYQNDPEVAELIKELKTLM 355
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|1129207839|gb|OLQ09666.1| (Hsc70-interacting protein [Symbiodinium microadriaticum]) HSP 1 Score: 69.707 bits (169), Expect = 6.687e-9 Identity = 30/64 (46.88%), Postives = 46/64 (71.88%), Query Frame = 0 Query: 364 VDPSMLASIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSLFKK 427 +DPSML+ IMS+P AF +PK+ AA+QD+M+NPGNI+KY ND ++ +++N++ F K Sbjct: 885 LDPSMLSGIMSDPELMQAFS----DPKMAAAMQDIMSNPGNIAKYQNDPDVMNLINKVMGAFSK 944
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|676388845|ref|XP_009037701.1| (hypothetical protein AURANDRAFT_64759 [Aureococcus anophagefferens] >gi|323451836|gb|EGB07712.1| hypothetical protein AURANDRAFT_64759 [Aureococcus anophagefferens]) HSP 1 Score: 68.9366 bits (167), Expect = 6.743e-9 Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 0 Query: 368 MLASIMSNPRAQAAFQRAQRNPKVMAALQDVMAN-PGNISKYANDKEISSILNELQSLF 425 +L M +P+ A Q+A +NPKVMAA+QDVMAN PG ++KYAND EI IL++L+ + Sbjct: 618 LLQKAMGDPKLMATIQQAAQNPKVMAAVQDVMANGPGAVNKYANDPEIKPILDQLKGIL 676
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|298713630|emb|CBJ33681.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 68.9366 bits (167), Expect = 8.009e-9 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0 Query: 368 MLASIMSNPRAQAAFQRAQRNPKVMAALQDVMAN-PGNISKYANDKEISSILNELQSLF 425 M+ +M+NP+A AFQ+AQ NPKVMAA+QDV N +SKY +D EI +I+ EL+ LF Sbjct: 829 MIGKMMNNPKAMEAFQKAQSNPKVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 887
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|922859722|gb|KOO27704.1| (conserved unknown protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 65.0846 bits (157), Expect = 3.624e-8 Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 0 Query: 370 ASIMSNPRAQAAFQRAQRNPKVMAALQDVMAN-PGNISKYANDKEISSILNELQSLF 425 A +MSNPRA A Q+AQ NPK+M ALQDV N P + KYA D E+ +++ ELQ + Sbjct: 237 AKMMSNPRAIALMQKAQTNPKIMKALQDVQTNGPSAMQKYAGDPEVMAVVKELQEIM 293
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|397610420|gb|EJK60823.1| (hypothetical protein THAOC_18766 [Thalassiosira oceanica]) HSP 1 Score: 65.0846 bits (157), Expect = 5.696e-8 Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0 Query: 373 MSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQ 422 MSNP+ QA +AQ+NPKVM A+Q+ M NP N+ KY +D E+ IL ELQ Sbjct: 305 MSNPKVQAVMAKAQQNPKVMKAVQESMGNPANMMKYMSDPEVGPILKELQ 354 The following BLAST results are available for this feature:
BLAST of EWM22413.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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