EWM22413.1, cds8177 (CDS) Nannochloropsis gaditana

Overview
NameEWM22413.1
Unique Namecds8177
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:75628..75756 +
Alignment locationKK037248.1:76055..76588 +
Alignment locationKK037248.1:76708..77328 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22413.1
ProductHeat shock chaperonin-binding protein
Orig transcript idgnl|cribi|Naga_100011g14.3413.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:75628..75756 +
KK037248.1supercontigKK037248.1:76055..76588 +
KK037248.1supercontigKK037248.1:76708..77328 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR006636STI1_HS-bd
Homology
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|585102919|gb|EWM22413.1| (Heat shock chaperonin-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 856.284 bits (2211), Expect = 0.000e+0
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0
Query:    1 MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGDQSQTQSANSSSSSSSSSSSSSSSSSSSSSTTYSDGKEKGGGETKAAKVDEATRHSEVLAEVMKLKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEVKRMPREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGGFADAFFRQAGGAGGARGSPFGGGGFGGMPGMGGVDPSMLASIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSLFKK 427
            MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGDQSQTQSANSSSSSSSSSSSSSSSSSSSSSTTYSDGKEKGGGETKAAKVDEATRHSEVLAEVMKLKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEVKRMPREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGGFADAFFRQAGGAGGARGSPFGGGGFGGMPGMGGVDPSMLASIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSLFKK
Sbjct:    1 MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGDQSQTQSANSSSSSSSSSSSSSSSSSSSSSTTYSDGKEKGGGETKAAKVDEATRHSEVLAEVMKLKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEVKRMPREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGGFADAFFRQAGGAGGARGSPFGGGGFGGMPGMGGVDPSMLASIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSLFKK 427          
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|553179895|ref|XP_005852782.1| (hypothetical protein NGA_0682300, partial [Nannochloropsis gaditana CCMP526] >gi|422295752|gb|EKU23051.1| hypothetical protein NGA_0682300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 319.701 bits (818), Expect = 2.940e-106
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query:    1 MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGD 156
            MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGD
Sbjct:    1 MRRRHLGAIILICSGTLSSAFTVPLRPWESCGSVIYPQRLPQSARAMSTLDVSSRRRPVGSFFKRGSALLRAAGAAAETGKEVDATKLAAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGD 156          
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|1210517620|dbj|GAX23535.1| (hypothetical protein FisN_14Hh289 [Fistulifera solaris])

HSP 1 Score: 112.079 bits (279), Expect = 4.253e-24
Identity = 105/347 (30.26%), Postives = 155/347 (44.67%), Query Frame = 0
Query:   89 AAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGDQSQTQSANSSSSSSSSSSSSSSSSSSSSSTTYSDGKEKGGGETKAAKVDEATRHSEVLAEVMKLKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEVKRM----PREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGGFADAFFRQAGGAGGARGSPFGG----GGFGGMPGMGGVDPSMLA---SIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSL 424
            A +L  I+ M+  EIK ELE  G+     LEK E ++ L  AR +G+T   P V      + S+   + S  Q+  +S    S                                     R  E + ++  +K SE+KKEL+ L +   SFFEK+EF +ALA AR++          V  +E  ++Y  VEV       PR  G +   + G  G   G G+ GG   +D+    G G A    G FA+     A   GGA  +PFGG    GG G  P  GGVDP   A    +M +P+ Q    +AQ NP +M  + + M++P   +KY ND +++ ++ EL+  
Sbjct:   49 ATDLPMIETMRAGEIKKELESYGISTVSFLEKSELVNALTKARAEGLT---PKVSSASTSSTSSTTSNTSSKQTDTTSGKPRSE------------------------------------RIREEMEKLQSMKASEMKKELEELGVSTKSFFEKQEFMKALAEARVD---------GVKNEESYAEYTNVEVLTDEFSGPRPKGQQSPSSYG--GPVDGPGSVGGMGIADILKNMGAGGA--GRGPFANGNVGNASPFGGA--NPFGGANPFGGKGSSP-FGGVDPGSFARAQKMMKDPKVQQIIAKAQSNPAIMKKINECMSSPAAFAKYQNDPDVADLIKELRKF 340          
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|1210530816|dbj|GAX10767.1| (hypothetical protein FisN_14Lh289 [Fistulifera solaris])

HSP 1 Score: 102.834 bits (255), Expect = 4.747e-21
Identity = 111/353 (31.44%), Postives = 166/353 (47.03%), Query Frame = 0
Query:   89 AAELTAIKPMKIKEIKAELEERGVDWKDLLEKEEFMHRLASARVQGITKPPPSVEETKEEAASTVGGDQSQTQSANSSSSSSSSSSSSSSSSSSSSSTTYSDGKEKGGGETKAAKVDEATRHSEVLAEVMKLKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEVKRM----PREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGGFADAFFRQAGGAGGARGSPFGGGG-FGG---------MPGMGGVDPSMLA---SIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSL 424
            A +L  I+ M+  EIK ELE  G+     LEK E ++ L  AR +G+T                             +S+++SSSS+SS++S++SS  T + GK +            + R  E + ++  +K SE+KKEL+ L +   SFFEK+EF +ALA AR++          V  +E  ++Y  VEV       PR  G +   + G  G   G G+ GG   +D+    G G A    G FA+      G  G A  SPFGG   FGG             GGVDP   A    +M +P+ Q    +AQ NP +M  + + M+NP   +KY ND +++ ++ EL+  
Sbjct:    6 ATDLPMIETMRAGEIKKELESYGISTVSFLEKSELVNALTKARAEGLTP---------------------------KASATTSSSSTSSTTSNTSSKQTDASGKPR------------SERIQEEMEKLQSMKASEMKKELEELGVSTKSFFEKQEFMKALAEARVD---------GVKKEESYAEYTNVEVLTDEFSGPRPKGQQSPSSYG--GPVDGPGSVGGMGIADILKNMGAGGA--GRGPFAN------GNVGNA--SPFGGANPFGGANPFGGKGGGSPFGGVDPGSFAKAQKMMKDPKVQQIIAKAQSNPAIMKKINECMSNPAAFAKYQNDPDVADLIKELRKF 298          
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|219116881|ref|XP_002179235.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409126|gb|EEC49058.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 80.4925 bits (197), Expect = 5.602e-13
Identity = 81/242 (33.47%), Postives = 111/242 (45.87%), Query Frame = 0
Query:  204 VDEATR-HSEVLAEVMK----LKISEIKKELDLLKIPHSSFFEKREFAEALARARLNPPSTTSRGENVDPDEDPSQYRFVEV----KRMPREGGGEGGRTGGRAGAGAGAGAGGGDPFSDMFNPRGGGAASGSGGG----------FADAFFRQAGGAGGARG-SPFGGGGFGGMPGMGGVDPSMLASIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSLF 425
            V E TR   E L E M+    +K  E+KKEL+   I   SFFEK EF +ALA AR++     S    VD  E  ++Y  VEV       PR+G  +                GGG+PF D        A SGS G                 +  G  G A G +PFGG G     G  G        +MSNP+ +    +AQ NP +M  +Q+ M+NP  ++KY ND E++ ++ EL++L 
Sbjct:  137 VAEDTRPRQERLVEEMQKCETMKAGELKKELEERGISTKSFFEKSEFVKALAEARVDGVEKKS----VD-SEGYAEYAEVEVLTDESSGPRQGKSQI----------QPPSPGGGNPFGD--------AGSGSSGNPFGGSMGGMGGIGDMLKNMGMGGSAAGANPFGGMGGMSGMGGMGDVMGKAQQMMSNPKVRELMVKAQSNPSIMKKMQECMSNPAALAKYQNDPEVAELIKELKTLM 355          
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|1129207839|gb|OLQ09666.1| (Hsc70-interacting protein [Symbiodinium microadriaticum])

HSP 1 Score: 69.707 bits (169), Expect = 6.687e-9
Identity = 30/64 (46.88%), Postives = 46/64 (71.88%), Query Frame = 0
Query:  364 VDPSMLASIMSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQSLFKK 427
            +DPSML+ IMS+P    AF     +PK+ AA+QD+M+NPGNI+KY ND ++ +++N++   F K
Sbjct:  885 LDPSMLSGIMSDPELMQAFS----DPKMAAAMQDIMSNPGNIAKYQNDPDVMNLINKVMGAFSK 944          
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|676388845|ref|XP_009037701.1| (hypothetical protein AURANDRAFT_64759 [Aureococcus anophagefferens] >gi|323451836|gb|EGB07712.1| hypothetical protein AURANDRAFT_64759 [Aureococcus anophagefferens])

HSP 1 Score: 68.9366 bits (167), Expect = 6.743e-9
Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 0
Query:  368 MLASIMSNPRAQAAFQRAQRNPKVMAALQDVMAN-PGNISKYANDKEISSILNELQSLF 425
            +L   M +P+  A  Q+A +NPKVMAA+QDVMAN PG ++KYAND EI  IL++L+ + 
Sbjct:  618 LLQKAMGDPKLMATIQQAAQNPKVMAAVQDVMANGPGAVNKYANDPEIKPILDQLKGIL 676          
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|298713630|emb|CBJ33681.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 68.9366 bits (167), Expect = 8.009e-9
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
Query:  368 MLASIMSNPRAQAAFQRAQRNPKVMAALQDVMAN-PGNISKYANDKEISSILNELQSLF 425
            M+  +M+NP+A  AFQ+AQ NPKVMAA+QDV  N    +SKY +D EI +I+ EL+ LF
Sbjct:  829 MIGKMMNNPKAMEAFQKAQSNPKVMAAIQDVTQNGMSAMSKYQDDPEILAIIEELKGLF 887          
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|922859722|gb|KOO27704.1| (conserved unknown protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 65.0846 bits (157), Expect = 3.624e-8
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  370 ASIMSNPRAQAAFQRAQRNPKVMAALQDVMAN-PGNISKYANDKEISSILNELQSLF 425
            A +MSNPRA A  Q+AQ NPK+M ALQDV  N P  + KYA D E+ +++ ELQ + 
Sbjct:  237 AKMMSNPRAIALMQKAQTNPKIMKALQDVQTNGPSAMQKYAGDPEVMAVVKELQEIM 293          
BLAST of EWM22413.1 vs. NCBI_GenBank
Match: gi|397610420|gb|EJK60823.1| (hypothetical protein THAOC_18766 [Thalassiosira oceanica])

HSP 1 Score: 65.0846 bits (157), Expect = 5.696e-8
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:  373 MSNPRAQAAFQRAQRNPKVMAALQDVMANPGNISKYANDKEISSILNELQ 422
            MSNP+ QA   +AQ+NPKVM A+Q+ M NP N+ KY +D E+  IL ELQ
Sbjct:  305 MSNPKVQAVMAKAQQNPKVMKAVQESMGNPANMMKYMSDPEVGPILKELQ 354          
The following BLAST results are available for this feature:
BLAST of EWM22413.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102919|gb|EWM22413.1|0.000e+0100.00Heat shock chaperonin-binding protein [Nannochloro... [more]
gi|553179895|ref|XP_005852782.1|2.940e-106100.00hypothetical protein NGA_0682300, partial [Nannoch... [more]
gi|1210517620|dbj|GAX23535.1|4.253e-2430.26hypothetical protein FisN_14Hh289 [Fistulifera sol... [more]
gi|1210530816|dbj|GAX10767.1|4.747e-2131.44hypothetical protein FisN_14Lh289 [Fistulifera sol... [more]
gi|219116881|ref|XP_002179235.1|5.602e-1333.47predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1129207839|gb|OLQ09666.1|6.687e-946.88Hsc70-interacting protein [Symbiodinium microadria... [more]
gi|676388845|ref|XP_009037701.1|6.743e-952.54hypothetical protein AURANDRAFT_64759 [Aureococcus... [more]
gi|298713630|emb|CBJ33681.1|8.009e-954.24conserved unknown protein [Ectocarpus siliculosus][more]
gi|922859722|gb|KOO27704.1|3.624e-852.63conserved unknown protein [Chrysochromulina sp. CC... [more]
gi|397610420|gb|EJK60823.1|5.696e-856.00hypothetical protein THAOC_18766 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8201rna8201Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications