EWM22491.1, cds8174 (CDS) Nannochloropsis gaditana

Overview
NameEWM22491.1
Unique Namecds8174
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:68429..69568 -

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Properties
Property NameValue
Protein idEWM22491.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g11.3491.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:68429..69568 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM22491.1 vs. NCBI_GenBank
Match: gi|553179892|ref|XP_005852781.1| (hypothetical protein NGA_0682200 [Nannochloropsis gaditana CCMP526] >gi|422295751|gb|EKU23050.1| hypothetical protein NGA_0682200 [Nannochloropsis gaditana CCMP526] >gi|585102997|gb|EWM22491.1| hypothetical protein Naga_100011g11 [Nannochloropsis gaditana])

HSP 1 Score: 766.533 bits (1978), Expect = 0.000e+0
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
Query:    1 MKPSSRRKQPARVSVSIPRVPFFSAAIAYVVVLCIPEAAPFVVPRPAIPPLLVPQVTPVRVTRASASTPFSSSMRRQAHTVYSPPGWDREMYRPPDDVLFEWQELVCCLKFMEEKEVNAGMLAPETRDMMIEYADALIAGGSPVRTLEGLAEAMMGRWKLAFTTEERYKILPPGTRVYYHIHRDGRLENVMKFKDKYWDSLISSATYNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKIRDPGTEQVFVTIYEYQGPIEGEERTPSPSLSLSSPPSSSSASSAGSLIAFLEGLEKEEQEELAEERRNEGEREGETSPPPADPSASGDPSVAPSSPPPSPSSSSSSPSSRVSA 379
            MKPSSRRKQPARVSVSIPRVPFFSAAIAYVVVLCIPEAAPFVVPRPAIPPLLVPQVTPVRVTRASASTPFSSSMRRQAHTVYSPPGWDREMYRPPDDVLFEWQELVCCLKFMEEKEVNAGMLAPETRDMMIEYADALIAGGSPVRTLEGLAEAMMGRWKLAFTTEERYKILPPGTRVYYHIHRDGRLENVMKFKDKYWDSLISSATYNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKIRDPGTEQVFVTIYEYQGPIEGEERTPSPSLSLSSPPSSSSASSAGSLIAFLEGLEKEEQEELAEERRNEGEREGETSPPPADPSASGDPSVAPSSPPPSPSSSSSSPSSRVSA
Sbjct:    1 MKPSSRRKQPARVSVSIPRVPFFSAAIAYVVVLCIPEAAPFVVPRPAIPPLLVPQVTPVRVTRASASTPFSSSMRRQAHTVYSPPGWDREMYRPPDDVLFEWQELVCCLKFMEEKEVNAGMLAPETRDMMIEYADALIAGGSPVRTLEGLAEAMMGRWKLAFTTEERYKILPPGTRVYYHIHRDGRLENVMKFKDKYWDSLISSATYNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKIRDPGTEQVFVTIYEYQGPIEGEERTPSPSLSLSSPPSSSSASSAGSLIAFLEGLEKEEQEELAEERRNEGEREGETSPPPADPSASGDPSVAPSSPPPSPSSSSSSPSSRVSA 379          
BLAST of EWM22491.1 vs. NCBI_GenBank
Match: gi|298709453|emb|CBJ31359.1| (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 84.7297 bits (208), Expect = 1.618e-15
Identity = 54/154 (35.06%), Postives = 77/154 (50.00%), Query Frame = 0
Query:  151 AEAMMGRWKLAFTTEERYKILPPGTRVYYHIHR---DGRLENVMKFKDKYW--DSLISSATYNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKIRDPGT-----EQVFVTIYEYQGPIEGEERTPSP 294
             + M G+WKL F+TEERYK LPP + VY +I+     GRL+NV++F  K W   S+ +   YN+  +G++ FEF      +         +K+PLP    N  + F +V Y DG LWIE      T     +   V IY   G    E++   P
Sbjct:   65 GDIMKGKWKLDFSTEERYKFLPPTSDVYNYIYDGAGGGRLDNVLRFY-KSWAVKSVRAVTNYNMDDRGKISFEFDRIEADLFG-------FKVPLPNF--NADAGFVEVQYFDGDLWIEAFEADTTMTESGKTTVVNIYRRIGDATEEDKVRVP 208          
BLAST of EWM22491.1 vs. NCBI_GenBank
Match: gi|873240522|emb|CEL93373.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 68.5514 bits (166), Expect = 4.390e-9
Identity = 54/188 (28.72%), Postives = 82/188 (43.62%), Query Frame = 0
Query:  100 FEWQELVCCLKFMEEKEVNAGMLAPE-TRDMMIEYADAL-----IAGG------------SPVRTLEGLAE---AMMGRWKLAFTTEERYKILPPGTRVYYHIHRDGRLENVMKFKDKYWDSLISSATYNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKI 266
            F  QEL C L+ M +KEV    L P    D ++ YA  L     + GG            +   T++ +++    + G W++AFT E RY + P G   +     DGR EN +  ++  W  L     Y L  +  LL   ++ +V+            IP  P+VG    +   + Y DG LWIEK+
Sbjct:  153 FAEQELKCTLREMNQKEVFQARLCPRPICDEVVSYARELTSVRSLQGGWKEGRGGAGAGEATEMTIDSMSQRRALLEGTWRVAFTEEVRYNVFPQGLDAFLVFDHDGRYENYVTARNFTW-RLQYGGDYQLVSEQALLLRKNNLKVNFFGL-------SIPTLPSVGEEKLS---MDYFDGDLWIEKL 329          
The following BLAST results are available for this feature:
BLAST of EWM22491.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|553179892|ref|XP_005852781.1|0.000e+0100.00hypothetical protein NGA_0682200 [Nannochloropsis ... [more]
gi|298709453|emb|CBJ31359.1|1.618e-1535.06expressed unknown protein [Ectocarpus siliculosus][more]
gi|873240522|emb|CEL93373.1|4.390e-928.72unnamed protein product [Vitrella brassicaformis C... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8198rna8198Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications