EWM22491.1, cds8174 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22491.1 vs. NCBI_GenBank
Match: gi|553179892|ref|XP_005852781.1| (hypothetical protein NGA_0682200 [Nannochloropsis gaditana CCMP526] >gi|422295751|gb|EKU23050.1| hypothetical protein NGA_0682200 [Nannochloropsis gaditana CCMP526] >gi|585102997|gb|EWM22491.1| hypothetical protein Naga_100011g11 [Nannochloropsis gaditana]) HSP 1 Score: 766.533 bits (1978), Expect = 0.000e+0 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
Query: 1 MKPSSRRKQPARVSVSIPRVPFFSAAIAYVVVLCIPEAAPFVVPRPAIPPLLVPQVTPVRVTRASASTPFSSSMRRQAHTVYSPPGWDREMYRPPDDVLFEWQELVCCLKFMEEKEVNAGMLAPETRDMMIEYADALIAGGSPVRTLEGLAEAMMGRWKLAFTTEERYKILPPGTRVYYHIHRDGRLENVMKFKDKYWDSLISSATYNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKIRDPGTEQVFVTIYEYQGPIEGEERTPSPSLSLSSPPSSSSASSAGSLIAFLEGLEKEEQEELAEERRNEGEREGETSPPPADPSASGDPSVAPSSPPPSPSSSSSSPSSRVSA 379
MKPSSRRKQPARVSVSIPRVPFFSAAIAYVVVLCIPEAAPFVVPRPAIPPLLVPQVTPVRVTRASASTPFSSSMRRQAHTVYSPPGWDREMYRPPDDVLFEWQELVCCLKFMEEKEVNAGMLAPETRDMMIEYADALIAGGSPVRTLEGLAEAMMGRWKLAFTTEERYKILPPGTRVYYHIHRDGRLENVMKFKDKYWDSLISSATYNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKIRDPGTEQVFVTIYEYQGPIEGEERTPSPSLSLSSPPSSSSASSAGSLIAFLEGLEKEEQEELAEERRNEGEREGETSPPPADPSASGDPSVAPSSPPPSPSSSSSSPSSRVSA
Sbjct: 1 MKPSSRRKQPARVSVSIPRVPFFSAAIAYVVVLCIPEAAPFVVPRPAIPPLLVPQVTPVRVTRASASTPFSSSMRRQAHTVYSPPGWDREMYRPPDDVLFEWQELVCCLKFMEEKEVNAGMLAPETRDMMIEYADALIAGGSPVRTLEGLAEAMMGRWKLAFTTEERYKILPPGTRVYYHIHRDGRLENVMKFKDKYWDSLISSATYNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKIRDPGTEQVFVTIYEYQGPIEGEERTPSPSLSLSSPPSSSSASSAGSLIAFLEGLEKEEQEELAEERRNEGEREGETSPPPADPSASGDPSVAPSSPPPSPSSSSSSPSSRVSA 379
BLAST of EWM22491.1 vs. NCBI_GenBank
Match: gi|298709453|emb|CBJ31359.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 84.7297 bits (208), Expect = 1.618e-15 Identity = 54/154 (35.06%), Postives = 77/154 (50.00%), Query Frame = 0
Query: 151 AEAMMGRWKLAFTTEERYKILPPGTRVYYHIHR---DGRLENVMKFKDKYW--DSLISSATYNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKIRDPGT-----EQVFVTIYEYQGPIEGEERTPSP 294
+ M G+WKL F+TEERYK LPP + VY +I+ GRL+NV++F K W S+ + YN+ +G++ FEF + +K+PLP N + F +V Y DG LWIE T + V IY G E++ P
Sbjct: 65 GDIMKGKWKLDFSTEERYKFLPPTSDVYNYIYDGAGGGRLDNVLRFY-KSWAVKSVRAVTNYNMDDRGKISFEFDRIEADLFG-------FKVPLPNF--NADAGFVEVQYFDGDLWIEAFEADTTMTESGKTTVVNIYRRIGDATEEDKVRVP 208
BLAST of EWM22491.1 vs. NCBI_GenBank
Match: gi|873240522|emb|CEL93373.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 68.5514 bits (166), Expect = 4.390e-9 Identity = 54/188 (28.72%), Postives = 82/188 (43.62%), Query Frame = 0
Query: 100 FEWQELVCCLKFMEEKEVNAGMLAPE-TRDMMIEYADAL-----IAGG------------SPVRTLEGLAE---AMMGRWKLAFTTEERYKILPPGTRVYYHIHRDGRLENVMKFKDKYWDSLISSATYNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKI 266
F QEL C L+ M +KEV L P D ++ YA L + GG + T++ +++ + G W++AFT E RY + P G + DGR EN + ++ W L Y L + LL ++ +V+ IP P+VG + + Y DG LWIEK+
Sbjct: 153 FAEQELKCTLREMNQKEVFQARLCPRPICDEVVSYARELTSVRSLQGGWKEGRGGAGAGEATEMTIDSMSQRRALLEGTWRVAFTEEVRYNVFPQGLDAFLVFDHDGRYENYVTARNFTW-RLQYGGDYQLVSEQALLLRKNNLKVNFFGL-------SIPTLPSVGEEKLS---MDYFDGDLWIEKL 329 The following BLAST results are available for this feature:
BLAST of EWM22491.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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