EWM22421.1, cds8171 (CDS) Nannochloropsis gaditana

Overview
NameEWM22421.1
Unique Namecds8171
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:62800..64095 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22421.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g8.3421.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:62800..64095 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|585102927|gb|EWM22421.1| (hypothetical protein Naga_100011g8 [Nannochloropsis gaditana])

HSP 1 Score: 879.011 bits (2270), Expect = 0.000e+0
Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 0
Query:    1 MQGLIEEVSAATADCPSSPAKEHFSDRGEDEVIHEETTASHPPSPDTAGSATDSLIRSLMEELSAAKEEIARLTKERAYFKRKAEWCTIEDQRILSPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTEIPDEVRGGYDGIEELIQEVEASEAEYKSLERAIRKGKIPPASVETSVVRSDTSAPSTLGPLSQGHENIKAKNREKAPDEEGGPASAPASLPATSLASAPAPSPKNTPLSSRSLYDWRRRLIARLDRLSHHLIVHMDQEESFFPPAVLRYFSQHEEERILEQMSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS 431
            MQGLIEEVSAATADCPSSPAKEHFSDRGEDEVIHEETTASHPPSPDTAGSATDSLIRSLMEELSAAKEEIARLTKERAYFKRKAEWCTIEDQRILSPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTEIPDEVRGGYDGIEELIQEVEASEAEYKSLERAIRKGKIPPASVETSVVRSDTSAPSTLGPLSQGHENIKAKNREKAPDEEGGPASAPASLPATSLASAPAPSPKNTPLSSRSLYDWRRRLIARLDRLSHHLIVHMDQEESFFPPAVLRYFSQHEEERILEQMSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS
Sbjct:    1 MQGLIEEVSAATADCPSSPAKEHFSDRGEDEVIHEETTASHPPSPDTAGSATDSLIRSLMEELSAAKEEIARLTKERAYFKRKAEWCTIEDQRILSPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTEIPDEVRGGYDGIEELIQEVEASEAEYKSLERAIRKGKIPPASVETSVVRSDTSAPSTLGPLSQGHENIKAKNREKAPDEEGGPASAPASLPATSLASAPAPSPKNTPLSSRSLYDWRRRLIARLDRLSHHLIVHMDQEESFFPPAVLRYFSQHEEERILEQMSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS 431          
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|553184247|ref|XP_005854059.1| (hypothetical protein NGA_0486800 [Nannochloropsis gaditana CCMP526] >gi|422295007|gb|EKU22306.1| hypothetical protein NGA_0486800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 187.193 bits (474), Expect = 2.750e-55
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query:  339 MSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS 431
            MSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS
Sbjct:    1 MSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS 93          
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|971518360|dbj|GAQ79824.1| (hypothetical protein KFL_000390130 [Klebsormidium nitens])

HSP 1 Score: 84.3445 bits (207), Expect = 1.062e-14
Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = 0
Query:   96 SPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTE-IPDEVRGGYDGIEELIQEVEASEAEYKSLERAIRKGKIPPASVE 221
            S VI   +HW + + L  HEPIR  L   E L+ +P FD  Q PWKV  FF ++N  F P V  HH VE+ I+ P +  + + IP+ +   ++G+  ++ +++  E  ++ L     KG  PP+  E
Sbjct:   15 STVIPVVNHWSDTSMLTPHEPIRDDLARMERLLQAPFFDGTQ-PWKVAAFFKWYNRWFYPNVHHHHDVEETIFFPLIKARCDVIPERMSADHEGLIHMLDDIKGMELRFQPLT----KGGSPPSMAE 136          
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|971514589|dbj|GAQ83624.1| (hypothetical protein KFL_001550140 [Klebsormidium nitens])

HSP 1 Score: 81.6481 bits (200), Expect = 9.525e-14
Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 0
Query:   96 SPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTE-IPDEVRGGYDGIEELIQEVEASEAEYKSL 206
            S VI + +HW + + L  HEPIR  L   E L+ +P FD  Q PWKV  FF ++N  F   V  HH +E+ I+ P V  + + IP+ +   ++G+  ++ E+ + EA +K L
Sbjct:   15 STVIPAVNHWSDGSLLAPHEPIRHDLARMERLLQAPFFDGTQ-PWKVAAFFKWYNDWFYFNVHHHHDIEETIFFPAVKARCDVIPERMAADHEGLLHMLDEIRSMEARFKPL 125          
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|971510354|dbj|GAQ87868.1| (hypothetical protein KFL_003830170 [Klebsormidium nitens])

HSP 1 Score: 81.2629 bits (199), Expect = 1.030e-13
Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 0
Query:   95 LSPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKT-EIPDEVRGGYDGIEELIQEVEASEAEYKSL 206
            LS V+   +HW + + L  HEPIR  L+  E L+ +P FD  Q PWKV  FF ++N  F+  V  HH +E+ I+ P V  +  EIP  +   ++G+ +++Q++ + E  +K L
Sbjct:   13 LSTVVPVVNHWSDASMLTPHEPIREDLVRMERLLQAPFFDGTQ-PWKVAAFFKWYNEWFSFTVNHHHNIEETIFFPAVKARCGEIPARMSTEHEGLIQMLQDISSMEVRFKPL 124          
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|971514588|dbj|GAQ83623.1| (hypothetical protein KFL_001550130 [Klebsormidium nitens])

HSP 1 Score: 77.7962 bits (190), Expect = 1.843e-12
Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 0
Query:   94 ILSPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTE-IPDEVRGGYDGIEELIQEVEASEAEYKSLERA 209
            I+ PV+T   HW + + L  HEPIR+ L   E L+  P FD  Q  WKV  FF ++N  F P V  HH +E+ I+ P V  + + IP+ +   ++ +  ++ E+ A E  +K L+R 
Sbjct:   16 IVIPVVT---HWSDASLLTPHEPIRNDLARMERLLQVPFFDGTQ-AWKVKAFFKWYNDWFYPNVHHHHDIEETIFFPAVKARCDVIPERMAADHEELIRMLDEIRAMELRFKPLKRG 128          
The following BLAST results are available for this feature:
BLAST of EWM22421.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 6
Match NameE-valueIdentityDescription
gi|585102927|gb|EWM22421.1|0.000e+0100.00hypothetical protein Naga_100011g8 [Nannochloropsi... [more]
gi|553184247|ref|XP_005854059.1|2.750e-55100.00hypothetical protein NGA_0486800 [Nannochloropsis ... [more]
gi|971518360|dbj|GAQ79824.1|1.062e-1434.65hypothetical protein KFL_000390130 [Klebsormidium ... [more]
gi|971514589|dbj|GAQ83624.1|9.525e-1436.61hypothetical protein KFL_001550140 [Klebsormidium ... [more]
gi|971510354|dbj|GAQ87868.1|1.030e-1336.28hypothetical protein KFL_003830170 [Klebsormidium ... [more]
gi|971514588|dbj|GAQ83623.1|1.843e-1235.90hypothetical protein KFL_001550130 [Klebsormidium ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8195rna8195Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications