EWM22421.1, cds8171 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|585102927|gb|EWM22421.1| (hypothetical protein Naga_100011g8 [Nannochloropsis gaditana]) HSP 1 Score: 879.011 bits (2270), Expect = 0.000e+0 Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 0
Query: 1 MQGLIEEVSAATADCPSSPAKEHFSDRGEDEVIHEETTASHPPSPDTAGSATDSLIRSLMEELSAAKEEIARLTKERAYFKRKAEWCTIEDQRILSPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTEIPDEVRGGYDGIEELIQEVEASEAEYKSLERAIRKGKIPPASVETSVVRSDTSAPSTLGPLSQGHENIKAKNREKAPDEEGGPASAPASLPATSLASAPAPSPKNTPLSSRSLYDWRRRLIARLDRLSHHLIVHMDQEESFFPPAVLRYFSQHEEERILEQMSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS 431
MQGLIEEVSAATADCPSSPAKEHFSDRGEDEVIHEETTASHPPSPDTAGSATDSLIRSLMEELSAAKEEIARLTKERAYFKRKAEWCTIEDQRILSPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTEIPDEVRGGYDGIEELIQEVEASEAEYKSLERAIRKGKIPPASVETSVVRSDTSAPSTLGPLSQGHENIKAKNREKAPDEEGGPASAPASLPATSLASAPAPSPKNTPLSSRSLYDWRRRLIARLDRLSHHLIVHMDQEESFFPPAVLRYFSQHEEERILEQMSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS
Sbjct: 1 MQGLIEEVSAATADCPSSPAKEHFSDRGEDEVIHEETTASHPPSPDTAGSATDSLIRSLMEELSAAKEEIARLTKERAYFKRKAEWCTIEDQRILSPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTEIPDEVRGGYDGIEELIQEVEASEAEYKSLERAIRKGKIPPASVETSVVRSDTSAPSTLGPLSQGHENIKAKNREKAPDEEGGPASAPASLPATSLASAPAPSPKNTPLSSRSLYDWRRRLIARLDRLSHHLIVHMDQEESFFPPAVLRYFSQHEEERILEQMSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS 431
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|553184247|ref|XP_005854059.1| (hypothetical protein NGA_0486800 [Nannochloropsis gaditana CCMP526] >gi|422295007|gb|EKU22306.1| hypothetical protein NGA_0486800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 187.193 bits (474), Expect = 2.750e-55 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query: 339 MSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS 431
MSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS
Sbjct: 1 MSSASAAHLELPMVLLAMDVWGSPETKAAFLKKLSRAARYTLNTYWLSSYKKSVARSLESLALQEPPPTVYLPHMSVNQLLVAAPVFLLCTIS 93
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|971518360|dbj|GAQ79824.1| (hypothetical protein KFL_000390130 [Klebsormidium nitens]) HSP 1 Score: 84.3445 bits (207), Expect = 1.062e-14 Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = 0
Query: 96 SPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTE-IPDEVRGGYDGIEELIQEVEASEAEYKSLERAIRKGKIPPASVE 221
S VI +HW + + L HEPIR L E L+ +P FD Q PWKV FF ++N F P V HH VE+ I+ P + + + IP+ + ++G+ ++ +++ E ++ L KG PP+ E
Sbjct: 15 STVIPVVNHWSDTSMLTPHEPIRDDLARMERLLQAPFFDGTQ-PWKVAAFFKWYNRWFYPNVHHHHDVEETIFFPLIKARCDVIPERMSADHEGLIHMLDDIKGMELRFQPLT----KGGSPPSMAE 136
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|971514589|dbj|GAQ83624.1| (hypothetical protein KFL_001550140 [Klebsormidium nitens]) HSP 1 Score: 81.6481 bits (200), Expect = 9.525e-14 Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 0
Query: 96 SPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTE-IPDEVRGGYDGIEELIQEVEASEAEYKSL 206
S VI + +HW + + L HEPIR L E L+ +P FD Q PWKV FF ++N F V HH +E+ I+ P V + + IP+ + ++G+ ++ E+ + EA +K L
Sbjct: 15 STVIPAVNHWSDGSLLAPHEPIRHDLARMERLLQAPFFDGTQ-PWKVAAFFKWYNDWFYFNVHHHHDIEETIFFPAVKARCDVIPERMAADHEGLLHMLDEIRSMEARFKPL 125
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|971510354|dbj|GAQ87868.1| (hypothetical protein KFL_003830170 [Klebsormidium nitens]) HSP 1 Score: 81.2629 bits (199), Expect = 1.030e-13 Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 0
Query: 95 LSPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKT-EIPDEVRGGYDGIEELIQEVEASEAEYKSL 206
LS V+ +HW + + L HEPIR L+ E L+ +P FD Q PWKV FF ++N F+ V HH +E+ I+ P V + EIP + ++G+ +++Q++ + E +K L
Sbjct: 13 LSTVVPVVNHWSDASMLTPHEPIREDLVRMERLLQAPFFDGTQ-PWKVAAFFKWYNEWFSFTVNHHHNIEETIFFPAVKARCGEIPARMSTEHEGLIQMLQDISSMEVRFKPL 124
BLAST of EWM22421.1 vs. NCBI_GenBank
Match: gi|971514588|dbj|GAQ83623.1| (hypothetical protein KFL_001550130 [Klebsormidium nitens]) HSP 1 Score: 77.7962 bits (190), Expect = 1.843e-12 Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 0
Query: 94 ILSPVITSTDHWQERTWLLLHEPIRSALLDFEELVASPSFDPVQYPWKVTNFFYFFNTAFAPYVRRHHQVEQKIYIPWVAGKTE-IPDEVRGGYDGIEELIQEVEASEAEYKSLERA 209
I+ PV+T HW + + L HEPIR+ L E L+ P FD Q WKV FF ++N F P V HH +E+ I+ P V + + IP+ + ++ + ++ E+ A E +K L+R
Sbjct: 16 IVIPVVT---HWSDASLLTPHEPIRNDLARMERLLQVPFFDGTQ-AWKVKAFFKWYNDWFYPNVHHHHDIEETIFFPAVKARCDVIPERMAADHEELIRMLDEIRAMELRFKPLKRG 128 The following BLAST results are available for this feature:
BLAST of EWM22421.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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