EWM29811.1, cds817 (CDS) Nannochloropsis gaditana

Overview
NameEWM29811.1
Unique Namecds817
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:491295..491604 +
Alignment locationCM002456.1:491910..491989 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29811.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100017g8.309.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:491295..491604 +
CM002456.1supercontigCM002456.1:491910..491989 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM29811.1 vs. NCBI_GenBank
Match: gi|585112392|gb|EWM29811.1| (hypothetical protein Naga_100017g8 [Nannochloropsis gaditana])

HSP 1 Score: 261.536 bits (667), Expect = 1.853e-88
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 
Query:    1 MLNRLITHKRSTNGPSKGAIATDLSVLFRFDPPPKNESLREQFPLVQCICTCIQKQIDLQSHIIEQSMAKSDSKTPVIVASLVFVSVAVAAVVFVKTGGLESNAAKKVKTFFSKIPGVGKLAGARADAP 129
            MLNRLITHKRSTNGPSKGAIATDLSVLFRFDPPPKNESLREQFPLVQCICTCIQKQIDLQSHIIEQSMAKSDSKTPVIVASLVFVSVAVAAVVFVKTGGLESNAAKKVKTFFSKIPGVGKLAGARADAP
Sbjct:    1 MLNRLITHKRSTNGPSKGAIATDLSVLFRFDPPPKNESLREQFPLVQCICTCIQKQIDLQSHIIEQSMAKSDSKTPVIVASLVFVSVAVAAVVFVKTGGLESNAAKKVKTFFSKIPGVGKLAGARADAP 129
The following BLAST results are available for this feature:
BLAST of EWM29811.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112392|gb|EWM29811.1|1.853e-88100.00hypothetical protein Naga_100017g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna817rna817Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications