EWM22501.1, cds8166 (CDS) Nannochloropsis gaditana

Overview
NameEWM22501.1
Unique Namecds8166
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:52293..53474 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22501.1
Productbestrophin-like protein
Orig transcript idgnl|cribi|Naga_100011g3.3501.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:52293..53474 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR021134Bestrophin/UPF0187
Homology
BLAST of EWM22501.1 vs. NCBI_GenBank
Match: gi|585103007|gb|EWM22501.1| (bestrophin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 803.512 bits (2074), Expect = 0.000e+0
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0
Query:    1 MQTTAMVSFLLFSISGQPRCSALLHVRLPLRPLPALDRVRPFYHHVHTFLRPFPRMPKGMSCLYSTSSASLQAPTLNSDKSSEEAPLPAPPKRKESAEHFAYWFTTYAFLMPEIRPVTFLSMVFSAVVALAYKHGVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVTRIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARIARAQTTFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPFSTGLVNVKTVWEEVVFNTPDLLKDAVQKVKKQM 393
            MQTTAMVSFLLFSISGQPRCSALLHVRLPLRPLPALDRVRPFYHHVHTFLRPFPRMPKGMSCLYSTSSASLQAPTLNSDKSSEEAPLPAPPKRKESAEHFAYWFTTYAFLMPEIRPVTFLSMVFSAVVALAYKHGVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVTRIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARIARAQTTFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPFSTGLVNVKTVWEEVVFNTPDLLKDAVQKVKKQM
Sbjct:    1 MQTTAMVSFLLFSISGQPRCSALLHVRLPLRPLPALDRVRPFYHHVHTFLRPFPRMPKGMSCLYSTSSASLQAPTLNSDKSSEEAPLPAPPKRKESAEHFAYWFTTYAFLMPEIRPVTFLSMVFSAVVALAYKHGVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVTRIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARIARAQTTFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPFSTGLVNVKTVWEEVVFNTPDLLKDAVQKVKKQM 393          
BLAST of EWM22501.1 vs. NCBI_GenBank
Match: gi|553184234|ref|XP_005854055.1| (hypothetical protein NGA_0486400 [Nannochloropsis gaditana CCMP526] >gi|422295003|gb|EKU22302.1| hypothetical protein NGA_0486400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 691.034 bits (1782), Expect = 0.000e+0
Identity = 337/338 (99.70%), Postives = 337/338 (99.70%), Query Frame = 0
Query:   56 MPKGMSCLYSTSSASLQAPTLNSDKSSEEAPLPAPPKRKESAEHFAYWFTTYAFLMPEIRPVTFLSMVFSAVVALAYKHGVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVTRIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARIARAQTTFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPFSTGLVNVKTVWEEVVFNTPDLLKDAVQKVKKQM 393
            MP GMSCLYSTSSASLQAPTLNSDKSSEEAPLPAPPKRKESAEHFAYWFTTYAFLMPEIRPVTFLSMVFSAVVALAYKHGVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVTRIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARIARAQTTFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPFSTGLVNVKTVWEEVVFNTPDLLKDAVQKVKKQM
Sbjct:    1 MPNGMSCLYSTSSASLQAPTLNSDKSSEEAPLPAPPKRKESAEHFAYWFTTYAFLMPEIRPVTFLSMVFSAVVALAYKHGVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVTRIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARIARAQTTFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPFSTGLVNVKTVWEEVVFNTPDLLKDAVQKVKKQM 338          
BLAST of EWM22501.1 vs. NCBI_GenBank
Match: gi|298709847|emb|CBJ26187.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 103.605 bits (257), Expect = 1.192e-20
Identity = 73/236 (30.93%), Postives = 127/236 (53.81%), Query Frame = 0
Query:  135 GVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVT--RIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARIARAQTTFRESPYFSR----LLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPFSTGL 364
            G + ++ ++PH+LL   LG LL FR    + R Q  R+ W+ VL+ SRD+AR       L  D        R+  L+  + ++L+E +   ++PR  E  +LL  +++  L     +RP+ ++ ++++E+  +      +R   + SR    +L+  ++LG        L +TPVP  +  H  RFLT++ F LPL +V ++ G A  PV+ L TW LFG++E+G+  + PF + L
Sbjct:  175 GGVHSMSIKPHTLLGSALGLLLVFRTNAAYQRFQEGRKLWEEVLNVSRDIAR----MSTLYEDVFGRRLVQRIANLLACHAVILQEHLQGYKLPRVWE--DLLRPEEVRDLMTTNCNRPLKVVNMISREIKSVP-----YRCEDWSSRERLAILSMCNKLGSTIGGCERLVQTPVPLHYVRHTSRFLTIWCFLLPLVIVGEM-GMATAPVVFLATWALFGIQEIGLLIEDPFQSAL 398          
BLAST of EWM22501.1 vs. NCBI_GenBank
Match: gi|493926472|ref|WP_006871248.1| (hypothetical protein [Legionella drancourtii] >gi|363537141|gb|EHL30568.1| hypothetical protein LDG_7334 [Legionella drancourtii LLAP12])

HSP 1 Score: 85.5001 bits (210), Expect = 4.260e-15
Identity = 75/251 (29.88%), Postives = 120/251 (47.81%), Query Frame = 0
Query:  123 VFSAVVALAYKHGVIGALD--LQPHSLLAGP-------LGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVTRIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARI--ARAQTTFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVI-GLMTWILFGLRELGIKAQYPFS 361
            VF  V+ +      I  LD  +   SL  GP       +G +L FR   G+DR   AR+ W  V++ SR++A  V       ++ K +  + +L   I A   L++  +      DE+K LL  Q L +LE +  H+P AL  I+A E+ R+  +    +F       +    +D  G    ++    KTP+P +    + RF+  ++  LP ALV+      + PVI GL+ + LF L ++GI+ Q PFS
Sbjct:   31 VFKKVLFMIGYSSFISCLDYFIPSISLPIGPFEYAGLIMGLILVFRVNAGYDRWWEARKIWGNVVNQSRNLAIIVSN----YANTKNTNWSIKLTKYIAALPYLMKNNLRGDASIDEIKRLLDPQLLSILE-QSEHKPNALSSIIAHELNRVRLSNELDSFSFLQAEEKRAMILDSQGACERIL----KTPMPFVMAVKSRRFILSFLLALPFALVN--ISLLISPVITGLVAYALFSLDQIGIELQNPFS 270          
BLAST of EWM22501.1 vs. NCBI_GenBank
Match: gi|585112188|gb|EWM29617.1| (Bestrophin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 87.4261 bits (215), Expect = 4.365e-15
Identity = 66/217 (30.41%), Postives = 99/217 (45.62%), Query Frame = 0
Query:  144 PHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVTRIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARIARAQTTFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPF 360
            PH L++  LG LL FR    +DR   AR+ W +V +  R++AR      I L D +Y     R   LI A+ + L   + R     EL+ LL   +    + R    P AL+ +    +   A +    R   Y   L   +  L +   +   +  TPVP  +  H  RFL+LY  TLP  LV ++      PV+G++ W LF + E+G   + PF
Sbjct:  209 PHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLAR---TGRIAL-DQRYH---ARFSMLIIAFAVTLRAHLQRNIVSTELETLLPSWE--ADQVRMDTCPPALVCMKLTYLINEAVSHNEARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFT-APVLGIVCWGLFSIEEIGHLIEEPF 415          
BLAST of EWM22501.1 vs. NCBI_GenBank
Match: gi|397628368|gb|EJK68867.1| (hypothetical protein THAOC_09919 [Thalassiosira oceanica])

HSP 1 Score: 84.7297 bits (208), Expect = 1.951e-14
Identity = 83/309 (26.86%), Postives = 132/309 (42.72%), Query Frame = 0
Query:  102 YWFTTYAF----LMPEIRPVTFLSMVFSAVVALAYK-----HGVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVT-RIPREDELKELLSEQDLLVLEARR-----------THR-------------PVALIEIMAQE-------VARIARAQTTFRESPYFSR-----LLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPFSTGL 364
            +W     F    ++ E R       V+S +V++ ++           L   PHSLLAG +G LL FR    + R    RRTW+++L+T+RD+ R +   +   +D  ++  A R+  L+ A+  LL   +  R   + E ++L     +L L   R           T R             P +++E  AQ          R+A   T  + S  FS      +L  + +L         L  T VP  +  HALR LT++ FTLP  LVD + G    P    + W++FG+ ++G   + PF   L
Sbjct:   17 WWHNVRNFHHSTILKETRGPVLAIAVWSFLVSIIHRALPTHRANSMCLGSTPHSLLAGSIGLLLVFRTNSAYQRFVEGRRTWESILNTARDITRFLSCYE---ADIGFARKA-RIQRLLAAFPYLLHHHIQPRCLSDGECEKLQHSAHVLQLNEPRPIEFGRKSEVSTRRCFVDKRSLPWCLLPDSVLEKCAQSHNRPLWISDRLALEFTEIKYSDNFSSRERLDMLKQVSKLSEAIGHCEPLHNTAVPLNYARHALRSLTVWSFTLPFGLVDTL-GLLTGPGCFFIAWLMFGIYQIGHSIEDPFKGSL 320          
BLAST of EWM22501.1 vs. NCBI_GenBank
Match: gi|746976354|gb|KIF33001.1| (hypothetical protein PI95_33205 [Hassallia byssoidea VB512170])

HSP 1 Score: 83.1889 bits (204), Expect = 2.577e-14
Identity = 71/264 (26.89%), Postives = 132/264 (50.00%), Query Frame = 0
Query:  110 LMPEIRPVTFLSMVFSAVVALAYKHGVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLS-----DDKYSFPAGRLIALIQAYGILLEEFVTRIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARIARAQTTFRESPY-FSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPFSTGLVNV 367
            ++P+I P    S VF   ++L Y  G+  +L +    + +  LG LL FR    +DR    R+ W +++   R++AR +    I++      D ++   A RLI    A+ I  + ++   P   EL+ L+S  +  VL++RRT  P+ +   ++  + +  R Q   R +P   + L + ID +    +    + +TP+P  +  H  + L +Y  +LP  LV  +   A   V+ L+++ LFG+ ++GI+ + PF+  L N+
Sbjct:   19 VIPKIMPQVLGSGVFGIFISLLYYLGLPVSLPILSALVPSIVLGLLLVFRTNTAYDRFWEGRKYWGSLVINVRNLARQIW---IVIEEQGPKDREHKIAALRLIV---AFTIATKLYLREEPINPELQGLMSPSEYFVLQSRRTP-PLEIAFWVSDFLQKQHRRQ---RVNPVQVTALQHLIDNIIDAFSSCERILQTPMPLPYAIHLKQLLLIYCLSLPFQLVKDL-NWATGLVVALISFTLFGIEQIGIEIENPFARALHNL 271          
BLAST of EWM22501.1 vs. NCBI_GenBank
Match: gi|495552459|ref|WP_008277038.1| (hypothetical protein [Cyanothece sp. CCY0110] >gi|126619131|gb|EAZ89869.1| hypothetical protein CY0110_06274 [Cyanothece sp. CCY0110])

HSP 1 Score: 82.4185 bits (202), Expect = 5.141e-14
Identity = 64/260 (24.62%), Postives = 124/260 (47.69%), Query Frame = 0
Query:  110 LMPEIRPVTFLSMVFSAVVALAYKHGVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRL--IALIQAYGILLEEFVTRIPREDELKELLSEQ--DLLVLEARRTHRPVALI----EIMAQEVARIARAQTTFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGIKAQYPFS 361
            ++P I P  F   VF+  + + Y  G+  AL L+   + +  LG LL FR    ++R    R+ W T+++T R+++R +    I + ++  S    ++  + L+ A+ I  +  +   P  +EL   L E+  D L       H P+ +     + + Q+  +  +   +++ +  F  L   +D LG        + KTP+P  +  H  + + LY  TLP   VD++ G    P++ L+++ + G+  +GI+ + PF 
Sbjct:   26 VIPSILPRVFACAVFALGITIVYDFGINIALPLESGLVPSIVLGLLLVFRTNTAYERYWEGRKLWGTLINTVRNLSRSLW---ITIKENDSSDRTQKIATLRLLVAFAIATKLHLRSEPVNEELARFLPEKCYDKLF---TMNHPPLEIAFWIGDYLQQQYEK--KCINSYQLTAMFKLLDTMVDVLGA----CERILKTPIPLAYTIHLQQLVLLYCLTLPFQFVDEL-GWMTAPIVALISFTILGIEAIGIEIENPFG 272          
BLAST of EWM22501.1 vs. NCBI_GenBank
Match: gi|1085356027|gb|OGV27961.1| (hypothetical protein A3E88_07010 [Legionellales bacterium RIFCSPHIGHO2_12_FULL_35_11])

HSP 1 Score: 82.0333 bits (201), Expect = 6.457e-14
Identity = 66/255 (25.88%), Postives = 123/255 (48.24%), Query Frame = 0
Query:  112 PEIRPVTFLSMVFSAVVALAYKHGVIGALDLQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVTRIPREDELKELLSEQDLLVLEARRTHRPVALIEIMAQEVARIARAQT----TFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVP-VIGLMTWILFGLRELGIKAQYPFS 361
            P++    F+ M++S +V++ Y    + AL + P       +G +L FR   G+DR   AR+ W  +++ SR++A  +     +  ++       R+ AL      L++  +       ++K LL E+ L     +  +RP  L+  + +E+A + +       +F ++      L  ID LG        + KTP+P +    + RF+ L++ TLP ALV+      + P VIG++ + L  L ++G++ Q PFS
Sbjct:   29 PQVIKNVFIIMIYSTIVSILYLIFPVIALPIGPFEYTGVIMGLILVFRVNAGYDRWWEARKIWGNIVNQSRNLAIIIMNYSTIKDNELIIKLTNRVAAL----PYLIKNHLRSDASLKQVKPLL-EEGLYQKIYKANNRPNILLSEICKELAYLHKNNLMDSFSFLQAEEKRGFL--IDNLGA----CERILKTPMPFVMAVKSRRFILLFLITLPFALVN--VSVYINPIVIGIIAYTLLSLDQIGVELQNPFS 270          
BLAST of EWM22501.1 vs. NCBI_GenBank
Match: gi|551574621|ref|XP_005773069.1| (hypothetical protein EMIHUDRAFT_242012 [Emiliania huxleyi CCMP1516] >gi|485624606|gb|EOD20640.1| hypothetical protein EMIHUDRAFT_242012 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 82.8037 bits (203), Expect = 1.109e-13
Identity = 69/217 (31.80%), Postives = 109/217 (50.23%), Query Frame = 0
Query:  142 LQPHSLLAGPLGFLLTFRAQQGFDRCQGARRTWDTVLDTSRDMARCVGGADILLSDDKYSFPAGRLIALIQAYGILLEEFVT--RIPREDELKELLSEQDLLVLEARR--THRPVALIEIMAQEVARIARAQTTFRESPYFSRLLNCIDQLGHHTTLIHSLTKTPVPPIFYTHALRFLTLYVFTLPLALVDKIPGGALVPVIGLMTWILFGLRELGI 354
             Q HSLL G L  LL FR    ++R   ARR W+ +L+  R++AR          D        RL  L+ A+ ++L   +     P  + L   L+     + +A R  + RP+ L + +A E++ ++ A      S      L+ ++QLG +      L +TPVP  +  H  RFLTL+  TLP++LV  + G  +VPV   +TW LFG++E+G+
Sbjct:  191 FQMHSLLGGALSLLLVFRTNSAYNRFWEARRIWENLLNRCRELARYA----YCFRDQLQPCRVDRLAQLLTAFPVMLRRHLCGEARPAAEGLLAPLAPLPAPLCDAMRSSSSRPLYLCKRLAAEISGVSDASDGTFTSRERLMGLSLVNQLGSYVGACERLLQTPVPLNYARHTSRFLTLWCLTLPVSLVGSM-GLLVVPVTAFVTWCLFGIQEIGL 402          
The following BLAST results are available for this feature:
BLAST of EWM22501.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103007|gb|EWM22501.1|0.000e+0100.00bestrophin-like protein [Nannochloropsis gaditana][more]
gi|553184234|ref|XP_005854055.1|0.000e+099.70hypothetical protein NGA_0486400 [Nannochloropsis ... [more]
gi|298709847|emb|CBJ26187.1|1.192e-2030.93conserved unknown protein [Ectocarpus siliculosus][more]
gi|493926472|ref|WP_006871248.1|4.260e-1529.88hypothetical protein [Legionella drancourtii] >gi|... [more]
gi|585112188|gb|EWM29617.1|4.365e-1530.41Bestrophin-like protein [Nannochloropsis gaditana][more]
gi|397628368|gb|EJK68867.1|1.951e-1426.86hypothetical protein THAOC_09919 [Thalassiosira oc... [more]
gi|746976354|gb|KIF33001.1|2.577e-1426.89hypothetical protein PI95_33205 [Hassallia byssoid... [more]
gi|495552459|ref|WP_008277038.1|5.141e-1424.62hypothetical protein [Cyanothece sp. CCY0110] >gi|... [more]
gi|1085356027|gb|OGV27961.1|6.457e-1425.88hypothetical protein A3E88_07010 [Legionellales ba... [more]
gi|551574621|ref|XP_005773069.1|1.109e-1331.80hypothetical protein EMIHUDRAFT_242012 [Emiliania ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8190rna8190Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications