EWM22510.1, cds8163 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22510.1 vs. NCBI_GenBank
Match: gi|585103017|gb|EWM22510.1| (triosephosphate isomerase [Nannochloropsis gaditana]) HSP 1 Score: 177.563 bits (449), Expect = 2.070e-56 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
Query: 1 MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGGGIAGRGEVCADY 89
MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGGGIAGRGEVCADY
Sbjct: 1 MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGGGIAGRGEVCADY 89
BLAST of EWM22510.1 vs. NCBI_GenBank
Match: gi|676391825|ref|XP_009039190.1| (hypothetical protein AURANDRAFT_29693 [Aureococcus anophagefferens] >gi|323450361|gb|EGB06243.1| hypothetical protein AURANDRAFT_29693 [Aureococcus anophagefferens]) HSP 1 Score: 106.686 bits (265), Expect = 6.687e-27 Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 0
Query: 3 NVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGGG 78
++ IAYEPVWAIGTGL ++AQ VH +RA L E Y QAVAD V IQYGGSVTP++VDELM+MPDIDG GG
Sbjct: 129 DLVIAYEPVWAIGTGLVCPSDVAQSVHKTVRAFLAELYDQAVADAVRIQYGGSVTPESVDELMSMPDIDGCLVGGA 204
BLAST of EWM22510.1 vs. NCBI_GenBank
Match: gi|1210520102|dbj|GAX20985.1| (triosephosphate isomerase [Fistulifera solaris]) HSP 1 Score: 105.531 bits (262), Expect = 1.288e-26 Identity = 52/77 (67.53%), Postives = 59/77 (76.62%), Query Frame = 0
Query: 1 MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGG 77
M+ V IAYEPVWAIGTG ATPEIAQ+VH+ R IL E YG+ +ADK I YGGSVTP++VD LMA PDIDG GG
Sbjct: 95 MDKVVIAYEPVWAIGTGKVATPEIAQEVHAMCRGILAEMYGKEIADKTRILYGGSVTPESVDGLMAKPDIDGSLVGG 171
BLAST of EWM22510.1 vs. NCBI_GenBank
Match: gi|612398161|ref|XP_007514600.1| (triosephosphate isomerase [Bathycoccus prasinos] >gi|412986414|emb|CCO14840.1| triosephosphate isomerase [Bathycoccus prasinos]) HSP 1 Score: 111.309 bits (277), Expect = 1.593e-26 Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 0
Query: 1 MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGGG 78
+EN+ IAYEPVWAIGTGLTATP IAQ VH IR + E Y ++VAD+V IQYGGSV PD+VDELM PDIDG GG
Sbjct: 291 VENMIIAYEPVWAIGTGLTATPAIAQSVHKLIRNWIAEKYSKSVADRVRIQYGGSVKPDSVDELMQCPDIDGCLVGGA 368
BLAST of EWM22510.1 vs. NCBI_GenBank
Match: gi|1210511708|dbj|GAX29192.1| (hypothetical protein FisN_28Lh020 [Fistulifera solaris]) HSP 1 Score: 104.375 bits (259), Expect = 1.630e-26 Identity = 52/77 (67.53%), Postives = 58/77 (75.32%), Query Frame = 0
Query: 1 MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGG 77
M VAIAYEPVWAIGTG ATPEIAQ VH+ R IL + YG A+AD+ I YGGSVTP++VD LMA PDIDG GG
Sbjct: 78 MSRVAIAYEPVWAIGTGKVATPEIAQSVHATCRGILRDMYGDAIADQTRILYGGSVTPESVDGLMAQPDIDGALVGG 154
BLAST of EWM22510.1 vs. NCBI_GenBank
Match: gi|1085369359|gb|OGV40531.1| (triose-phosphate isomerase [Lentisphaerae bacterium GWF2_49_21]) HSP 1 Score: 106.686 bits (265), Expect = 1.664e-26 Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0
Query: 1 MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGG 77
M V IAYEPVWAIGTG TA+P+ AQ+VH+ IR +L +A+G+AVADKV++QYGGSV D ELMA PDIDG GG
Sbjct: 160 MHKVTIAYEPVWAIGTGKTASPDQAQEVHALIRKLLTDAFGKAVADKVIVQYGGSVKADNAKELMAKPDIDGALVGG 236
BLAST of EWM22510.1 vs. NCBI_GenBank
Match: gi|219112703|ref|XP_002178103.1| (triosephosphate isomerase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410988|gb|EEC50917.1| triosephosphate isomerase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 107.457 bits (267), Expect = 2.003e-26 Identity = 52/77 (67.53%), Postives = 58/77 (75.32%), Query Frame = 0
Query: 1 MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGG 77
+ VAIAYEPVWAIGTG ATPEIAQ VH+ RA+L E YG AD I YGGSVTP++VD+LMAMPDIDG GG
Sbjct: 197 LSRVAIAYEPVWAIGTGKVATPEIAQSVHAKCRAVLAEMYGPETADATRILYGGSVTPESVDDLMAMPDIDGALVGG 273
BLAST of EWM22510.1 vs. NCBI_GenBank
Match: gi|1210530581|dbj|GAX10806.1| (triosephosphate isomerase [Fistulifera solaris]) HSP 1 Score: 103.605 bits (257), Expect = 6.065e-26 Identity = 51/77 (66.23%), Postives = 59/77 (76.62%), Query Frame = 0
Query: 1 MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGG 77
M+ V IAYEPVWAIGTG ATPEIAQ+VH+ R IL E YG+ +AD+ I YGGSVTP++VD LMA PDIDG GG
Sbjct: 95 MDKVVIAYEPVWAIGTGKVATPEIAQEVHAMCRGILAEMYGKEIADETRILYGGSVTPESVDGLMAKPDIDGSLVGG 171
BLAST of EWM22510.1 vs. NCBI_GenBank
Match: gi|145353513|ref|XP_001421055.1| (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >gi|144581291|gb|ABO99348.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 104.76 bits (260), Expect = 7.480e-26 Identity = 51/77 (66.23%), Postives = 57/77 (74.03%), Query Frame = 0
Query: 1 MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGG 77
M V IAYEPVWAIGTGLTATP IAQ VH+ IR YG++VA K+ IQYGGSV P+TVDELM PD+DG GG
Sbjct: 161 MSKVIIAYEPVWAIGTGLTATPAIAQSVHAGIRQWFRTNYGESVAAKIQIQYGGSVKPETVDELMQAPDVDGCLVGG 237
BLAST of EWM22510.1 vs. NCBI_GenBank
Match: gi|224002643|ref|XP_002290993.1| (triose-phosphate isomerase [Thalassiosira pseudonana CCMP1335] >gi|220972769|gb|EED91100.1| triose-phosphate isomerase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 104.76 bits (260), Expect = 1.421e-25 Identity = 53/77 (68.83%), Postives = 56/77 (72.73%), Query Frame = 0
Query: 1 MENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPDTVDELMAMPDIDGVPGGG 77
M VAIAYEPVWAIGTG ATPEIAQ+VH R IL E Y Q AD V I YGGSVTPD+VDELM+ DIDG GG
Sbjct: 187 MSRVAIAYEPVWAIGTGKVATPEIAQNVHKQCRDILAEMYDQETADGVRILYGGSVTPDSVDELMSQEDIDGALVGG 263 The following BLAST results are available for this feature:
BLAST of EWM22510.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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