EWM22512.1, cds8162 (CDS) Nannochloropsis gaditana

Overview
NameEWM22512.1
Unique Namecds8162
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:43383..43521 +
Alignment locationKK037248.1:43601..43730 +
Alignment locationKK037248.1:43836..44076 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22512.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101124g1.2594.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:43383..43521 +
KK037248.1supercontigKK037248.1:43601..43730 +
KK037248.1supercontigKK037248.1:43836..44076 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22512.1 vs. NCBI_GenBank
Match: gi|585103022|gb|EWM22512.1| (hypothetical protein Naga_101124g1 [Nannochloropsis gaditana])

HSP 1 Score: 346.665 bits (888), Expect = 7.089e-121
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 
Query:    1 MTRKRPRNGHDNKHIACSHLLLQSFSKLVKTGYRGIYVVLAAQPDAALKTLLHGWKSMGGKGKSIVIVEDKEGSDAGAAAADNVQKEQLRPSSPPRHEHCAPCPPRTSYCESAPFSWPLFISRRARSNIRHGKKHPTWLPLPLEASRAGRAVALTHIYAPSPPGPARGS 169
            MTRKRPRNGHDNKHIACSHLLLQSFSKLVKTGYRGIYVVLAAQPDAALKTLLHGWKSMGGKGKSIVIVEDKEGSDAGAAAADNVQKEQLRPSSPPRHEHCAPCPPRTSYCESAPFSWPLFISRRARSNIRHGKKHPTWLPLPLEASRAGRAVALTHIYAPSPPGPARGS
Sbjct:    1 MTRKRPRNGHDNKHIACSHLLLQSFSKLVKTGYRGIYVVLAAQPDAALKTLLHGWKSMGGKGKSIVIVEDKEGSDAGAAAADNVQKEQLRPSSPPRHEHCAPCPPRTSYCESAPFSWPLFISRRARSNIRHGKKHPTWLPLPLEASRAGRAVALTHIYAPSPPGPARGS 169
The following BLAST results are available for this feature:
BLAST of EWM22512.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103022|gb|EWM22512.1|7.089e-121100.00hypothetical protein Naga_101124g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8186rna8186Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications