EWM22515.1, cds8158 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22515.1 vs. NCBI_GenBank
Match: gi|585103027|gb|EWM22515.1| (hypothetical protein Naga_100952g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 1261.13 bits (3262), Expect = 0.000e+0 Identity = 645/645 (100.00%), Postives = 645/645 (100.00%), Query Frame = 0
Query: 1 MARWKASSGETASVDSSPFVFLFRVFPPPFGSWPHSLSFFPLHTVLLYPSWTNNAISICHDFLFFIPPIMPPIASHALPGYAKALRRSRSEHGRLLFLSVLVAAYSRHIFVTPFRCTYPSRLPSVRGQAPPCSGRLHATATTHMRRSSSPPPSPSSSSSSTVPRPSAPSPPSRRRTPSVSITFSVPPSPPLLDPGSRLQPPPLSAPRCIPAPPRPSPSRGPPVPATSTTRRVLNLLTDALPDLDPSLLPLLPSSFFQQPPERIQARLSFLHTTLPGIDLPHALRRVPKLLTYYGMGAPAMERRLAHTYSNLIAALPKKQAALNLLNAAPRLLLRDFETRIEPYLHTFTTTSPTLDAAYLLTQHPVLLHKGIASHLLPRLAALPTLFPPSFPPPGPEDLGALLTRYPPLLTLPLPDLSARLAALSLLLPPDLLLPTLIRHPRAWTADLTEVIGPQIHLLLSALGPTTTKTVLHHLPSILYHPPDALTHKLDLLSSLLGSSAGANVLLARNPMILAMDIAANVAPKLRYLHSLFPHMDETSFVSLVGSAAGSQCLSAAFGRLGRLSYLLQIQPDMDVEEGMRLVGAPSEELRRWYPGYENFLEDRIEPRFPAYSWEQLCALPFAVREQAHGELLHGAFSREEGGRRG 645
MARWKASSGETASVDSSPFVFLFRVFPPPFGSWPHSLSFFPLHTVLLYPSWTNNAISICHDFLFFIPPIMPPIASHALPGYAKALRRSRSEHGRLLFLSVLVAAYSRHIFVTPFRCTYPSRLPSVRGQAPPCSGRLHATATTHMRRSSSPPPSPSSSSSSTVPRPSAPSPPSRRRTPSVSITFSVPPSPPLLDPGSRLQPPPLSAPRCIPAPPRPSPSRGPPVPATSTTRRVLNLLTDALPDLDPSLLPLLPSSFFQQPPERIQARLSFLHTTLPGIDLPHALRRVPKLLTYYGMGAPAMERRLAHTYSNLIAALPKKQAALNLLNAAPRLLLRDFETRIEPYLHTFTTTSPTLDAAYLLTQHPVLLHKGIASHLLPRLAALPTLFPPSFPPPGPEDLGALLTRYPPLLTLPLPDLSARLAALSLLLPPDLLLPTLIRHPRAWTADLTEVIGPQIHLLLSALGPTTTKTVLHHLPSILYHPPDALTHKLDLLSSLLGSSAGANVLLARNPMILAMDIAANVAPKLRYLHSLFPHMDETSFVSLVGSAAGSQCLSAAFGRLGRLSYLLQIQPDMDVEEGMRLVGAPSEELRRWYPGYENFLEDRIEPRFPAYSWEQLCALPFAVREQAHGELLHGAFSREEGGRRG
Sbjct: 1 MARWKASSGETASVDSSPFVFLFRVFPPPFGSWPHSLSFFPLHTVLLYPSWTNNAISICHDFLFFIPPIMPPIASHALPGYAKALRRSRSEHGRLLFLSVLVAAYSRHIFVTPFRCTYPSRLPSVRGQAPPCSGRLHATATTHMRRSSSPPPSPSSSSSSTVPRPSAPSPPSRRRTPSVSITFSVPPSPPLLDPGSRLQPPPLSAPRCIPAPPRPSPSRGPPVPATSTTRRVLNLLTDALPDLDPSLLPLLPSSFFQQPPERIQARLSFLHTTLPGIDLPHALRRVPKLLTYYGMGAPAMERRLAHTYSNLIAALPKKQAALNLLNAAPRLLLRDFETRIEPYLHTFTTTSPTLDAAYLLTQHPVLLHKGIASHLLPRLAALPTLFPPSFPPPGPEDLGALLTRYPPLLTLPLPDLSARLAALSLLLPPDLLLPTLIRHPRAWTADLTEVIGPQIHLLLSALGPTTTKTVLHHLPSILYHPPDALTHKLDLLSSLLGSSAGANVLLARNPMILAMDIAANVAPKLRYLHSLFPHMDETSFVSLVGSAAGSQCLSAAFGRLGRLSYLLQIQPDMDVEEGMRLVGAPSEELRRWYPGYENFLEDRIEPRFPAYSWEQLCALPFAVREQAHGELLHGAFSREEGGRRG 645
BLAST of EWM22515.1 vs. NCBI_GenBank
Match: gi|585103026|gb|EWM22514.1| (hypothetical protein Naga_100952g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 1098.58 bits (2840), Expect = 0.000e+0 Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 0
Query: 80 GYAKALRRSRSEHGRLLFLSVLVAAYSRHIFVTPFRCTYPSRLPSVRGQAPPCSGRLHATATTHMRRSSSPPPSPSSSSSSTVPRPSAPSPPSRRRTPSVSITFSVPPSPPLLDPGSRLQPPPLSAPRCIPAPPRPSPSRGPPVPATSTTRRVLNLLTDALPDLDPSLLPLLPSSFFQQPPERIQARLSFLHTTLPGIDLPHALRRVPKLLTYYGMGAPAMERRLAHTYSNLIAALPKKQAALNLLNAAPRLLLRDFETRIEPYLHTFTTTSPTLDAAYLLTQHPVLLHKGIASHLLPRLAALPTLFPPSFPPPGPEDLGALLTRYPPLLTLPLPDLSARLAALSLLLPPDLLLPTLIRHPRAWTADLTEVIGPQIHLLLSALGPTTTKTVLHHLPSILYHPPDALTHKLDLLSSLLGSSAGANVLLARNPMILAMDIAANVAPKLRYLHSLFPHMDETSFVSLVGSAAGSQCLSAAFGRLGRLSYLLQIQPDMDVEEGMRLVGAPSEELRRWYPGYENFLEDRIEPRFPAYSWEQLCALPFAVREQAHGELLHGAFSREEGGRRG 645
GYAKALRRSRSEHGRLLFLSVLVAAYSRHIFVTPFRCTYPSRLPSVRGQAPPCSGRLHATATTHMRRSSSPPPSPSSSSSSTVPRPSAPSPPSRRRTPSVSITFSVPPSPPLLDPGSRLQPPPLSAPRCIPAPPRPSPSRGPPVPATSTTRRVLNLLTDALPDLDPSLLPLLPSSFFQQPPERIQARLSFLHTTLPGIDLPHALRRVPKLLTYYGMGAPAMERRLAHTYSNLIAALPKKQAALNLLNAAPRLLLRDFETRIEPYLHTFTTTSPTLDAAYLLTQHPVLLHKGIASHLLPRLAALPTLFPPSFPPPGPEDLGALLTRYPPLLTLPLPDLSARLAALSLLLPPDLLLPTLIRHPRAWTADLTEVIGPQIHLLLSALGPTTTKTVLHHLPSILYHPPDALTHKLDLLSSLLGSSAGANVLLARNPMILAMDIAANVAPKLRYLHSLFPHMDETSFVSLVGSAAGSQCLSAAFGRLGRLSYLLQIQPDMDVEEGMRLVGAPSEELRRWYPGYENFLEDRIEPRFPAYSWEQLCALPFAVREQAHGELLHGAFSREEGGRRG
Sbjct: 9 GYAKALRRSRSEHGRLLFLSVLVAAYSRHIFVTPFRCTYPSRLPSVRGQAPPCSGRLHATATTHMRRSSSPPPSPSSSSSSTVPRPSAPSPPSRRRTPSVSITFSVPPSPPLLDPGSRLQPPPLSAPRCIPAPPRPSPSRGPPVPATSTTRRVLNLLTDALPDLDPSLLPLLPSSFFQQPPERIQARLSFLHTTLPGIDLPHALRRVPKLLTYYGMGAPAMERRLAHTYSNLIAALPKKQAALNLLNAAPRLLLRDFETRIEPYLHTFTTTSPTLDAAYLLTQHPVLLHKGIASHLLPRLAALPTLFPPSFPPPGPEDLGALLTRYPPLLTLPLPDLSARLAALSLLLPPDLLLPTLIRHPRAWTADLTEVIGPQIHLLLSALGPTTTKTVLHHLPSILYHPPDALTHKLDLLSSLLGSSAGANVLLARNPMILAMDIAANVAPKLRYLHSLFPHMDETSFVSLVGSAAGSQCLSAAFGRLGRLSYLLQIQPDMDVEEGMRLVGAPSEELRRWYPGYENFLEDRIEPRFPAYSWEQLCALPFAVREQAHGELLHGAFSREEGGRRG 574
BLAST of EWM22515.1 vs. NCBI_GenBank
Match: gi|922853955|gb|KOO22528.1| (expressed unknown protein, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 80.8777 bits (198), Expect = 8.489e-13 Identity = 71/245 (28.98%), Postives = 108/245 (44.08%), Query Frame = 0
Query: 297 APAMERRLAHTYSNLIAALPKKQAALNLLNAAPRLLLRDFETRIEPYLHTFTTTSPTLDAAYLLTQHPVLLHKGIASHLLPRLAALPTLFPPSFPPPGPEDLGALLTRYPPLLTLPLPDLSARLAALSLLLPPDLLLPTLIRHPRAWTADLTEVIGPQIHLLLSALGPTTTKTVLHHLPSILYHPPDALTHKLDLLSSLLGSSAGANVLLARNPMILAMDIAANVAPKLRYLHSLFPHMDETSFV 541
APA++RR A ++ A AA L+ AP +L D E +EP L P +D L+ + P +L + + L PR+ L + P D+ + R P LL LP DL RLAAL LLP G ++++ V PS+L + P+A+ KLD L+ L GS+A A ++ R P +L D+ +A K+R + P++D T +
Sbjct: 57 APALDRRAA-----ILEAALGSDAARILMLRAPLVLASDLEWTLEPRLAALRELLPGVDIPTLVVRAPAVLELDLQTMLEPRVRQLEAMLPKGV------DVARTVRRAPTLLHLP--DLEQRLAALGALLP----------------------------------GVSSSQLV-SRAPSLLAYAPEAVVRKLDELAELFGSAANAAAMVKREPALLTYDVRHTLAAKVRVFETWLPNLDATKLL 253
BLAST of EWM22515.1 vs. NCBI_GenBank
Match: gi|585112413|gb|EWM29832.1| (Mitochodrial transcription termination factor [Nannochloropsis gaditana]) HSP 1 Score: 66.6254 bits (161), Expect = 7.649e-8 Identity = 97/349 (27.79%), Postives = 153/349 (43.84%), Query Frame = 0
Query: 247 LLPLLPSSFFQQPPERIQARLSFLHTTLPGIDLPHALRRVPKLLTYYGMGAPAMERRLAHTYSNLIAALPKKQAALNLLNAAPRLLLRDFETRIEPYLHTFTTTSPTLDAAYLLTQHPVLLHKGIASHLLPRLAALPTLFPPSFPPPGPEDLGALLTRYPPLLTLPLPDLSARL----AALSLLLPPDLLLPTLIRHPRAWTADLTEVIGPQIHLLLSALGPTTTK----TVLHHLPSILYHPPD-ALTHKLDLLSSLLGSSAGANVLLARNPMILAMDIAANVAPKLRYLHSLFPHMDETSFV----SLVGSAAGS-----QCLSAAFGRLGRLSYLLQIQPDMDVEE 577
L PL +FF P I+ RL L+ P + + RVP LL A R+A L A LP + L L+ AP L+ +DF+++I+ P +D A ++ +P +L + + L P++ AL +FP E+LG ++ R P LL+ D + RL L+ LP + R P + +V H L AL P T+ +++ PS+L + L KL L ++LGS+A A L P IL+ D+ V +L+ L + P D F+ + + SA G+ L + F R L +L +P + E+
Sbjct: 85 LQPLAGLAFF--PLGLIERRLEHLYALFPRENATSMVCRVPDLLCVEPNDLAA---RVAERQVQLAALLPACRP-LRLMAKAPILVFQDFDSQIKSTAERLEWELPGMDLARVVCPNPAVLTRAWDTVLFPQIVALRAIFP-------QENLGRIIMRRPDLLS---RDAAGRLREGMEGLARHLPSVKVEMLAARQPDILALEPRQVAARIKH--LEALFPAATRAEVAKMINRKPSLLLTSVERVLRPKLARLRNILGSAA-AQELCQTMPSILSRDL-EQVEARLKLLRAPVPGQDLVRFLRYNPAFLSSAPGAVGARLTALQSVFPRGVELGKMLIREPKLYAED 413 The following BLAST results are available for this feature:
BLAST of EWM22515.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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