EWM22527.1, cds8146 (CDS) Nannochloropsis gaditana

Overview
NameEWM22527.1
Unique Namecds8146
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:744224..745339 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22527.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101481g2.7142.mrna
GbkeyCDS
End range.
End range745339
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:744224..745339 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
Homology
BLAST of EWM22527.1 vs. NCBI_GenBank
Match: gi|585103050|gb|EWM22527.1| (hypothetical protein Naga_101481g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 730.324 bits (1884), Expect = 0.000e+0
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0
Query:    1 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQRGDAEEGTISSSLASPGASQVTEVTLRGGAVGEGAAQRASWRLGGEAKQRYKVSILVPAEEGRKFSREDEGSTVRLMFKEGVTGMVVREVGRKGKRKRVVNEGEEEEEEEEEDDDDDDDDDEDEDEEEDGDDGEEDDGEEEEEEEEDGIEGEKMMEKRKKRRRRRRGTRRRRRRRRRKWRRRRRRRIKRNKKRWRWSL 371
            YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQRGDAEEGTISSSLASPGASQVTEVTLRGGAVGEGAAQRASWRLGGEAKQRYKVSILVPAEEGRKFSREDEGSTVRLMFKEGVTGMVVREVGRKGKRKRVVNEGEEEEEEEEEDDDDDDDDDEDEDEEEDGDDGEEDDGEEEEEEEEDGIEGEKMMEKRKKRRRRRRGTRRRRRRRRRKWRRRRRRRIKRNKKRWRWSL
Sbjct:    1 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQRGDAEEGTISSSLASPGASQVTEVTLRGGAVGEGAAQRASWRLGGEAKQRYKVSILVPAEEGRKFSREDEGSTVRLMFKEGVTGMVVREVGRKGKRKRVVNEGEEEEEEEEEDDDDDDDDDEDEDEEEDGDDGEEDDGEEEEEEEEDGIEGEKMMEKRKKRRRRRRGTRRRRRRRRRKWRRRRRRRIKRNKKRWRWSL 371          
BLAST of EWM22527.1 vs. NCBI_GenBank
Match: gi|553183504|ref|XP_005853910.1| (hypothetical protein NGA_0459300 [Nannochloropsis gaditana CCMP526] >gi|422295151|gb|EKU22450.1| hypothetical protein NGA_0459300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0
Identity = 271/274 (98.91%), Postives = 271/274 (98.91%), Query Frame = 0
Query:    1 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQRGDAEEGTISSSLASPGASQVTEVTLRGGAVGEGAAQRASWRLGGEAKQRYKVSILVPAEEGRKFSREDEGSTVRLMFKEGVTGMVVREVGRKGKRKRVVN 274
            YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWAD DG E GGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQRGDAEEGTISSSLASPGASQVTEVTLRGGAVGEGAAQRASWRLGGEAKQRYKVSILVPAEEGRKFSREDEGSTVRLMFKEGVTGMVVREVGRKGKRKRVVN
Sbjct:  175 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADEDGWEEGGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQRGDAEEGTISSSLASPGASQVTEVTLRGGAVGEGAAQRASWRLGGEAKQRYKVSILVPAEEGRKFSREDEGSTVRLMFKEGVTGMVVREVGRKGKRKRVVN 448          
BLAST of EWM22527.1 vs. NCBI_GenBank
Match: gi|553178383|ref|XP_005852547.1| (hypothetical protein NGA_0697400 [Nannochloropsis gaditana CCMP526] >gi|422295986|gb|EKU23285.1| hypothetical protein NGA_0697400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 520.39 bits (1339), Expect = 0.000e+0
Identity = 256/259 (98.84%), Postives = 256/259 (98.84%), Query Frame = 0
Query:    1 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQRGDAEEGTISSSLASPGASQVTEVTLRGGAVGEGAAQRASWRLGGEAKQRYKVSILVPAEEGRKFSREDEGSTVRLMFKEGVTGMV 259
            YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWAD DG E GGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQRGDAEEGTISSSLASPGASQVTEVTLRGGAVGEGAAQRASWRLGGEAKQRYKVSILVPAEEGRKFSREDEGSTVRLMFKEGVTGMV
Sbjct:  153 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADEDGWEEGGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQRGDAEEGTISSSLASPGASQVTEVTLRGGAVGEGAAQRASWRLGGEAKQRYKVSILVPAEEGRKFSREDEGSTVRLMFKEGVTGMV 411          
BLAST of EWM22527.1 vs. NCBI_GenBank
Match: gi|298712474|emb|CBJ33246.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 150.599 bits (379), Expect = 3.583e-37
Identity = 84/171 (49.12%), Postives = 105/171 (61.40%), Query Frame = 0
Query:    1 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHV--GEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLE------GGGRAER-----------------KGG-------RKRVTLLVNVWLNHIP 139
            + +  SGAEWW QV+E+ DDIG H+DKDY +EA G+N++P LATVTYLS+ GGPT+VL   GP+     E++SG  + AW+S PA+GKH  FDGR LHAAPA+L  L     GL+      GGG  +R                 KGG       R+RVT LVNVWLNH P
Sbjct:  125 FNQETSGAEWWTQVIEDADDIGWHWDKDYGMEARGINVHPCLATVTYLSTNGGPTVVLEKKGPMACEDMEEVSGEAAKAWVSRPALGKHICFDGRYLHAAPADL-ALPPQTTGLDETPPLGGGGSKKRDKDGESKVVLPGSSVDGKGGSSNTTARRRRVTFLVNVWLNHTP 294          
BLAST of EWM22527.1 vs. NCBI_GenBank
Match: gi|551653553|ref|XP_005829554.1| (hypothetical protein GUITHDRAFT_111547 [Guillardia theta CCMP2712] >gi|428173673|gb|EKX42574.1| hypothetical protein GUITHDRAFT_111547 [Guillardia theta CCMP2712])

HSP 1 Score: 130.954 bits (328), Expect = 8.033e-31
Identity = 68/147 (46.26%), Postives = 90/147 (61.22%), Query Frame = 0
Query:    1 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEA-HGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVG--EDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSER 144
            Y    SGAEWW    E  DD+GLH+D+DY LE+  G+ ++PHL+TVTYL+ +GGPT+V     P+  G  E++ G ++   LS P+ GKH  FDGRLLH AP       AD D      + +     KR+T LVNVWLNH+P  +ER
Sbjct:  195 YEPSKSGAEWWTLAFEPGDDVGLHWDRDYELESTSGILVHPHLSTVTYLTGVGGPTIVFDKISPMETGPLEEILGEIAEGILSRPSPGKHVSFDGRLLHGAP-------ADADAW----KHQHSKKEKRITFLVNVWLNHVPVTAER 330          
BLAST of EWM22527.1 vs. NCBI_GenBank
Match: gi|551606172|ref|XP_005784456.1| (hypothetical protein EMIHUDRAFT_202565 [Emiliania huxleyi CCMP1516] >gi|485637541|gb|EOD32027.1| hypothetical protein EMIHUDRAFT_202565 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 125.561 bits (314), Expect = 1.977e-29
Identity = 81/175 (46.29%), Postives = 104/175 (59.43%), Query Frame = 0
Query:    6 SGAEWWVQVLEEEDDIGLHFDKDYALEA-HGLNIYPHLATVTYLSSLGG-PTLVLPLSGPLHVGEDLSGALSG----AWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQR 174
            SGAEWW QV++EE DI  H+D+DY L+   G+ ++PH+A+VTYL+ LGG PTLVLP++ P+ +  DL  A +G    A    PA G H  FDGRLLH APA L            GGR E     KRVTLLVNVWLN  P G++     + + LS   ++ PL  R P  P  +R
Sbjct:  105 SGAEWWTQVVDEELDIPFHWDRDYELQKEEGVCLHPHVASVTYLTGLGGAPTLVLPVASPV-LAADLPAACAGRVRSASACHPAAGFHLSFDGRLLHGAPAALS-----------GGRLE----GKRVTLLVNVWLNWKPGGADPLHEEVARTLS--AASVPLSWRHPCEPSARR 261          
BLAST of EWM22527.1 vs. NCBI_GenBank
Match: gi|551563823|ref|XP_005768543.1| (hypothetical protein EMIHUDRAFT_245323 [Emiliania huxleyi CCMP1516] >gi|485619264|gb|EOD16114.1| hypothetical protein EMIHUDRAFT_245323 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 125.176 bits (313), Expect = 3.271e-29
Identity = 81/180 (45.00%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEA-HGLNIYPHLATVTYLSSLGG-PTLVLPLSGPLHVGEDLSGALSG----AWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAAPLECRIPLAPPFQR 174
            +    SGAEWW QV++EE DI  H+D+DY L+   G+ ++PH+A+VTYL+ LGG PTLVLP++ P+ +  DL  A +G    A    PA G H  FDGRLLH APA L            GGR E     KRVTLLVNVWLN  P G++     + + LS   ++ PL  R P  P  +R
Sbjct:  103 FDASSSGAEWWTQVVDEELDIPFHWDRDYELQKEEGVCLHPHVASVTYLTGLGGAPTLVLPVASPV-LAADLPAACAGRVRSASACHPAAGFHLSFDGRLLHGAPAALS-----------GGRLE----GKRVTLLVNVWLNWKPGGADPLHEEVARTLS--AASVPLSWRHPCEPSARR 264          
BLAST of EWM22527.1 vs. NCBI_GenBank
Match: gi|1199289970|gb|OUS45071.1| (hypothetical protein BE221DRAFT_193240 [Ostreococcus tauri])

HSP 1 Score: 120.553 bits (301), Expect = 2.475e-28
Identity = 67/153 (43.79%), Postives = 86/153 (56.21%), Query Frame = 0
Query:    1 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGED-------LSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSERPS 146
            Y    SGAEWW QV+++ED+IG H+DKDYALE  G+N++P L TVTY    G PT+V  +  P  V  D       + G +S   +S P  GK   FDG+LLH AP+E               R   +  RKR+T LVNVWLNH P  +E+ S
Sbjct:   17 YDPETSGAEWWTQVIDDEDEIGWHWDKDYALEGSGVNVHPQLGTVTYFCDGGAPTVV--VDRPTEVEYDGDSGDVGVCGDISSCSISWPEWGKQITFDGKLLHGAPSEF-------------SRTPTQ-SRKRITFLVNVWLNHKPLTAEQLS 153          
BLAST of EWM22527.1 vs. NCBI_GenBank
Match: gi|1173928259|gb|OQR81903.1| (hypothetical protein THRCLA_11302 [Thraustotheca clavata])

HSP 1 Score: 121.324 bits (303), Expect = 1.000e-27
Identity = 66/163 (40.49%), Postives = 89/163 (54.60%), Query Frame = 0
Query:    1 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEA-HGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGEDLSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWAD--GDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSERPSPSLLQALSPCDSAA 160
            Y   +SGAEWW Q ++  D+IG H+D+DY +E    L+++P + TVTYL    GPT++L   G    G  + G L+   +S P  GKH  FDG LLH AP+ L     D   +GL             RVT LVNVW+NHIP  SER +  + + L    +AA
Sbjct:  102 YDAANSGAEWWTQHIDHRDNIGFHWDRDYGMEEDQELHVHPLVGTVTYLCVNAGPTVILDKKGTFEYGSSIEGPLTKCIISRPIAGKHITFDGELLHGAPSSLAFPEVDEEAEGL-------------RVTFLVNVWVNHIPIQSERINADIAKTLKLTANAA 251          
BLAST of EWM22527.1 vs. NCBI_GenBank
Match: gi|693496276|emb|CEG00800.1| (unnamed product [Ostreococcus tauri])

HSP 1 Score: 121.324 bits (303), Expect = 3.206e-27
Identity = 67/153 (43.79%), Postives = 86/153 (56.21%), Query Frame = 0
Query:    1 YTEGHSGAEWWVQVLEEEDDIGLHFDKDYALEAHGLNIYPHLATVTYLSSLGGPTLVLPLSGPLHVGED-------LSGALSGAWLSLPAVGKHTVFDGRLLHAAPAELRGLWADGDGLEGGGRAERKGGRKRVTLLVNVWLNHIPNGSERPS 146
            Y    SGAEWW QV+++ED+IG H+DKDYALE  G+N++P L TVTY    G PT+V  +  P  V  D       + G +S   +S P  GK   FDG+LLH AP+E               R   +  RKR+T LVNVWLNH P  +E+ S
Sbjct:  196 YDPETSGAEWWTQVIDDEDEIGWHWDKDYALEGSGVNVHPQLGTVTYFCDGGAPTVV--VDRPTEVEYDGDSGDVGVCGDISSCSISWPEWGKQITFDGKLLHGAPSEF-------------SRTPTQ-SRKRITFLVNVWLNHKPLTAEQLS 332          
The following BLAST results are available for this feature:
BLAST of EWM22527.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103050|gb|EWM22527.1|0.000e+0100.00hypothetical protein Naga_101481g2, partial [Nanno... [more]
gi|553183504|ref|XP_005853910.1|0.000e+098.91hypothetical protein NGA_0459300 [Nannochloropsis ... [more]
gi|553178383|ref|XP_005852547.1|0.000e+098.84hypothetical protein NGA_0697400 [Nannochloropsis ... [more]
gi|298712474|emb|CBJ33246.1|3.583e-3749.12conserved unknown protein [Ectocarpus siliculosus][more]
gi|551653553|ref|XP_005829554.1|8.033e-3146.26hypothetical protein GUITHDRAFT_111547 [Guillardia... [more]
gi|551606172|ref|XP_005784456.1|1.977e-2946.29hypothetical protein EMIHUDRAFT_202565 [Emiliania ... [more]
gi|551563823|ref|XP_005768543.1|3.271e-2945.00hypothetical protein EMIHUDRAFT_245323 [Emiliania ... [more]
gi|1199289970|gb|OUS45071.1|2.475e-2843.79hypothetical protein BE221DRAFT_193240 [Ostreococc... [more]
gi|1173928259|gb|OQR81903.1|1.000e-2740.49hypothetical protein THRCLA_11302 [Thraustotheca c... [more]
gi|693496276|emb|CEG00800.1|3.206e-2743.79unnamed product [Ostreococcus tauri][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8170rna8170Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications