EWM22528.1, cds8145 (CDS) Nannochloropsis gaditana

Overview
NameEWM22528.1
Unique Namecds8145
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:743143..743150 +
Alignment locationKK037247.1:743230..743314 +
Alignment locationKK037247.1:743458..743551 +
Alignment locationKK037247.1:743692..743831 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22528.1
Productprotein phosphatase 2a catalytic subunit
Orig transcript idgnl|cribi|Naga_101481g1.7143.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:743143..743150 +
KK037247.1supercontigKK037247.1:743230..743314 +
KK037247.1supercontigKK037247.1:743458..743551 +
KK037247.1supercontigKK037247.1:743692..743831 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029052Metallo-depent_PP-like
IPR006186Ser/Thr-sp_prot-phosphatase
Homology
[Close]
BLAST of EWM22528.1 vs. NCBI_GenBank
Match: gi|585103051|gb|EWM22528.1| (protein phosphatase 2a catalytic subunit [Nannochloropsis gaditana])

HSP 1 Score: 228.794 bits (582), Expect = 4.073e-76
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 
Query:    1 MTTGAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
            MTTGAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL
Sbjct:    1 MTTGAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
[Close]
BLAST of EWM22528.1 vs. NCBI_GenBank
Match: gi|299115118|emb|CBN75485.1| (conserved unknown protein (Partial), partial [Ectocarpus siliculosus])

HSP 1 Score: 169.088 bits (427), Expect = 8.927e-50
Identity = 77/105 (73.33%), Postives = 85/105 (80.95%), Query Frame = 0 
Query:    4 GAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
            GAGYTFGQDITEQFNH NGL F+ARAHQL+MEGYQWTH QGV TIFSAPNY YRCGNQAA+MEVDE       + +Y +CNF +FDPAPRE   +Q KR PDYFL
Sbjct:  215 GAGYTFGQDITEQFNHTNGLMFIARAHQLVMEGYQWTHNQGVCTIFSAPNYCYRCGNQAAIMEVDETVPKQISEALYDHCNFTQFDPAPREKNWRQSKRVPDYFL 319
[Close]
BLAST of EWM22528.1 vs. NCBI_GenBank
Match: gi|695413368|ref|XP_009526013.1| (hypothetical protein PHYSODRAFT_346049 [Phytophthora sojae] >gi|348677138|gb|EGZ16955.1| hypothetical protein PHYSODRAFT_346049 [Phytophthora sojae])

HSP 1 Score: 167.933 bits (424), Expect = 2.679e-49
Identity = 75/105 (71.43%), Postives = 85/105 (80.95%), Query Frame = 0 
Query:    4 GAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
            GAGYTFGQDITEQF   NGL+F+ARAHQL+MEGYQWTH +GVVTIFSAPNY YRCGNQAALME+DE      G  VY+ C FI+FDPAPR+ +  + KR PDYFL
Sbjct:  215 GAGYTFGQDITEQFKRSNGLTFIARAHQLVMEGYQWTHNRGVVTIFSAPNYCYRCGNQAALMEIDEVMADRNGDKVYETCKFIQFDPAPRDSSFNEKKRTPDYFL 319
[Close]
BLAST of EWM22528.1 vs. NCBI_GenBank
Match: gi|813150115|ref|XP_012200704.1| (serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Saprolegnia parasitica CBS 223.65] >gi|641534704|gb|KDO28643.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 167.933 bits (424), Expect = 3.918e-49
Identity = 78/105 (74.29%), Postives = 83/105 (79.05%), Query Frame = 0 
Query:    4 GAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
            GAGYTFG DITEQF   NGLSFVARAHQL+MEGYQW H++GVVTIFSAPNY YR GNQAALMEVDE F  T G+ VY  C FI+FDPAPR  AG    R PDYFL
Sbjct:  227 GAGYTFGADITEQFTRANGLSFVARAHQLVMEGYQWMHQRGVVTIFSAPNYCYRVGNQAALMEVDEMFAQTSGEKVYDACKFIQFDPAPRNFAGSSKPRAPDYFL 331
[Close]
BLAST of EWM22528.1 vs. NCBI_GenBank
Match: gi|669154370|ref|XP_008612747.1| (serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Saprolegnia diclina VS20] >gi|530735710|gb|EQC33952.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Saprolegnia diclina VS20])

HSP 1 Score: 167.548 bits (423), Expect = 4.461e-49
Identity = 78/105 (74.29%), Postives = 83/105 (79.05%), Query Frame = 0 
Query:    4 GAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
            GAGYTFG DITEQF   NGLSFVARAHQL+MEGYQW H++GVVTIFSAPNY YR GNQAALMEVDE F  T G+ VY  C FI+FDPAPR  AG    R PDYFL
Sbjct:  224 GAGYTFGADITEQFTRANGLSFVARAHQLVMEGYQWMHQRGVVTIFSAPNYCYRVGNQAALMEVDEMFAQTSGEKVYDACKFIQFDPAPRNFAGSSKPRAPDYFL 328
[Close]
BLAST of EWM22528.1 vs. NCBI_GenBank
Match: gi|953494253|emb|CEG43847.1| (serine threonine-protein phosphatase pp2a [Plasmopara halstedii])

HSP 1 Score: 166.777 bits (421), Expect = 6.573e-49
Identity = 75/105 (71.43%), Postives = 84/105 (80.00%), Query Frame = 0 
Query:    4 GAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
            GAGYTFGQDITEQF   NGL+F+ARAHQL+MEGYQWTH +GVVTIFSAPNY YRCGNQAALME+DE      G  VY+ C FI+FDPAPR+    + KR PDYFL
Sbjct:  215 GAGYTFGQDITEQFKRSNGLTFIARAHQLVMEGYQWTHNRGVVTIFSAPNYCYRCGNQAALMEIDEVMADRSGDKVYETCKFIQFDPAPRDSNFNEKKRTPDYFL 319
[Close]
BLAST of EWM22528.1 vs. NCBI_GenBank
Match: gi|1214708102|gb|OWZ19422.1| (Serine/threonine-protein phosphatase [Phytophthora megakarya])

HSP 1 Score: 166.777 bits (421), Expect = 6.864e-49
Identity = 75/105 (71.43%), Postives = 84/105 (80.00%), Query Frame = 0 
Query:    4 GAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
            GAGYTFGQDITEQF   NGL+F+ARAHQL+MEGYQWTH +GVVTIFSAPNY YRCGNQAALME+DE      G  VY+ C FI+FDPAPR+    + KR PDYFL
Sbjct:  215 GAGYTFGQDITEQFKRSNGLTFIARAHQLVMEGYQWTHNRGVVTIFSAPNYCYRCGNQAALMEIDEVMADRSGDKVYETCKFIQFDPAPRDSNFNEKKRTPDYFL 319
[Close]
BLAST of EWM22528.1 vs. NCBI_GenBank
Match: gi|675195195|ref|XP_008906482.1| (serine/threonine-protein phosphatase PP2A [Phytophthora parasitica INRA-310] >gi|566023070|gb|ETI45981.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica P1569] >gi|567960365|gb|ETK85926.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica] >gi|567989102|gb|ETL39370.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica] >gi|568018310|gb|ETL92485.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica] >gi|568048776|gb|ETM45806.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica] >gi|568093398|gb|ETN08194.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica INRA-310] >gi|570326726|gb|ETO74674.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica P1976] >gi|570950498|gb|ETP15755.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica CJ01A1] >gi|570984179|gb|ETP43842.1| serine/threonine-protein phosphatase PP2A [Phytophthora parasitica P10297] >gi|970637521|gb|KUF81528.1| Serine/threonine-protein phosphatase [Phytophthora nicotianae])

HSP 1 Score: 166.777 bits (421), Expect = 7.403e-49
Identity = 75/105 (71.43%), Postives = 84/105 (80.00%), Query Frame = 0 
Query:    4 GAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
            GAGYTFGQDITEQF   NGL+F+ARAHQL+MEGYQWTH +GVVTIFSAPNY YRCGNQAALME+DE      G  VY+ C FI+FDPAPR+    + KR PDYFL
Sbjct:  215 GAGYTFGQDITEQFKRSNGLTFIARAHQLVMEGYQWTHNRGVVTIFSAPNYCYRCGNQAALMEIDEVMADRNGDKVYETCKFIQFDPAPRDSNFNEKKRTPDYFL 319
[Close]
BLAST of EWM22528.1 vs. NCBI_GenBank
Match: gi|301120714|ref|XP_002908084.1| (serine/threonine-protein phosphatase PP2A [Phytophthora infestans T30-4] >gi|23394371|gb|AAN31475.1| serine/threonine protein phosphatase [Phytophthora infestans] >gi|262103115|gb|EEY61167.1| serine/threonine-protein phosphatase PP2A [Phytophthora infestans T30-4])

HSP 1 Score: 166.777 bits (421), Expect = 7.484e-49
Identity = 75/105 (71.43%), Postives = 84/105 (80.00%), Query Frame = 0 
Query:    4 GAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
            GAGYTFGQDITEQF   NGL+F+ARAHQL+MEGYQWTH +GVVTIFSAPNY YRCGNQAALME+DE      G  VY+ C FI+FDPAPR+    + KR PDYFL
Sbjct:  215 GAGYTFGQDITEQFKRSNGLTFIARAHQLVMEGYQWTHNRGVVTIFSAPNYCYRCGNQAALMEIDEVMADRNGDKVYETCKFIQFDPAPRDSNFNEKKRTPDYFL 319
[Close]
BLAST of EWM22528.1 vs. NCBI_GenBank
Match: gi|673054297|ref|XP_008881109.1| (serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Aphanomyces invadans] >gi|574463165|gb|ETV90258.1| serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Aphanomyces invadans])

HSP 1 Score: 165.622 bits (418), Expect = 2.106e-48
Identity = 75/105 (71.43%), Postives = 83/105 (79.05%), Query Frame = 0 
Query:    4 GAGYTFGQDITEQFNHVNGLSFVARAHQLIMEGYQWTHKQGVVTIFSAPNYYYRCGNQAALMEVDEQFGSTEGQDVYQYCNFIRFDPAPREDAGQQGKRQPDYFL 108
            GAGYTFGQDITEQF   NGL+F+ARAHQL+MEGYQWTH +GVVTIFSAPNY YRCGNQAALME+DE      G  VY  C FI+FDPAPR+    + KR PDYFL
Sbjct:  217 GAGYTFGQDITEQFKRSNGLTFIARAHQLVMEGYQWTHNRGVVTIFSAPNYCYRCGNQAALMEIDEVMADRGGDKVYDTCKFIQFDPAPRDHTFNEKKRTPDYFL 321
The following BLAST results are available for this feature:
BLAST of EWM22528.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103051|gb|EWM22528.1|4.073e-76100.00protein phosphatase 2a catalytic subunit [Nannochl... [more]
gi|299115118|emb|CBN75485.1|8.927e-5073.33conserved unknown protein (Partial), partial [Ecto... [more]
gi|695413368|ref|XP_009526013.1|2.679e-4971.43hypothetical protein PHYSODRAFT_346049 [Phytophtho... [more]
gi|813150115|ref|XP_012200704.1|3.918e-4974.29serine/threonine-protein phosphatase 2A catalytic ... [more]
gi|669154370|ref|XP_008612747.1|4.461e-4974.29serine/threonine-protein phosphatase 2A catalytic ... [more]
gi|953494253|emb|CEG43847.1|6.573e-4971.43serine threonine-protein phosphatase pp2a [Plasmop... [more]
gi|1214708102|gb|OWZ19422.1|6.864e-4971.43Serine/threonine-protein phosphatase [Phytophthora... [more]
gi|675195195|ref|XP_008906482.1|7.403e-4971.43serine/threonine-protein phosphatase PP2A [Phytoph... [more]
gi|301120714|ref|XP_002908084.1|7.484e-4971.43serine/threonine-protein phosphatase PP2A [Phytoph... [more]
gi|673054297|ref|XP_008881109.1|2.106e-4871.43serine/threonine-protein phosphatase 2A catalytic ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8169rna8169Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications