EWM22532.1, cds8139 (CDS) Nannochloropsis gaditana

Overview
NameEWM22532.1
Unique Namecds8139
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:726650..727000 +
Alignment locationKK037247.1:727170..727229 +
Alignment locationKK037247.1:727486..728140 +
Alignment locationKK037247.1:728322..728420 +
Alignment locationKK037247.1:728522..728586 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22532.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100290g2.9871.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:726650..727000 +
KK037247.1supercontigKK037247.1:727170..727229 +
KK037247.1supercontigKK037247.1:727486..728140 +
KK037247.1supercontigKK037247.1:728322..728420 +
KK037247.1supercontigKK037247.1:728522..728586 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR025749Sphingomyelin_synth-like_dom
Homology
BLAST of EWM22532.1 vs. NCBI_GenBank
Match: gi|585103057|gb|EWM22532.1| (hypothetical protein Naga_100290g2 [Nannochloropsis gaditana])

HSP 1 Score: 838.18 bits (2164), Expect = 0.000e+0
Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 0
Query:    1 MVVNGIMAVNKGSVTEDAIGSASRVIEMQESTTSVESCLPAPIPLCYLDGSKDYKGETPRIVDACKSAGRRVSAVSILSPPSGPSPRLSEVSRSYYSNHRNRAWDSWKAIRCKKWKEIEWQGRLEWALLKQEWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWMLTPEPTVADCDLLKVELPPGDMWGPLAHVGRDDARLFFSCPRIA 409
            MVVNGIMAVNKGSVTEDAIGSASRVIEMQESTTSVESCLPAPIPLCYLDGSKDYKGETPRIVDACKSAGRRVSAVSILSPPSGPSPRLSEVSRSYYSNHRNRAWDSWKAIRCKKWKEIEWQGRLEWALLKQEWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWMLTPEPTVADCDLLKVELPPGDMWGPLAHVGRDDARLFFSCPRIA
Sbjct:    1 MVVNGIMAVNKGSVTEDAIGSASRVIEMQESTTSVESCLPAPIPLCYLDGSKDYKGETPRIVDACKSAGRRVSAVSILSPPSGPSPRLSEVSRSYYSNHRNRAWDSWKAIRCKKWKEIEWQGRLEWALLKQEWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWMLTPEPTVADCDLLKVELPPGDMWGPLAHVGRDDARLFFSCPRIA 409          
BLAST of EWM22532.1 vs. NCBI_GenBank
Match: gi|553190962|ref|XP_005855301.1| (heat shock protein [Nannochloropsis gaditana CCMP526] >gi|422293757|gb|EKU21057.1| heat shock protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 463.766 bits (1192), Expect = 4.560e-162
Identity = 232/252 (92.06%), Postives = 232/252 (92.06%), Query Frame = 0
Query:  138 MFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWMLTPEPTVADCDLLKVELPPGDMWG 389
            MF VAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLI MVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVT                  DCDLLKVELPPGDMWG
Sbjct:    1 MFLVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIAMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVT------------------DCDLLKVELPPGDMWG 234          
BLAST of EWM22532.1 vs. NCBI_GenBank
Match: gi|553190971|ref|XP_005855304.1| (hypothetical protein NGA_0076400 [Nannochloropsis gaditana CCMP526] >gi|422293760|gb|EKU21060.1| hypothetical protein NGA_0076400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 280.796 bits (717), Expect = 4.321e-91
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0
Query:    1 MVVNGIMAVNKGSVTEDAIGSASRVIEMQESTTSVESCLPAPIPLCYLDGSKDYKGETPRIVDACKSAGRRVSAVSILSPPSGPSPRLSEVSRSYYSNHRNRAWDSWKAIRCKKWKEIEWQGRLEWALLKQEWKWIAM 138
            MVVNGIMAVNKGSVTEDAIGSASRVIEMQESTTSVESCLPAPIPLCYLDGSKDYKGETPRIVDACKSAGRRVSAVSILSPPSGPSPRLS+VSRSYYSNHRNRAWDSWKAIRCKKWKEIEWQGRLEWALLKQEWKWIA+
Sbjct:    1 MVVNGIMAVNKGSVTEDAIGSASRVIEMQESTTSVESCLPAPIPLCYLDGSKDYKGETPRIVDACKSAGRRVSAVSILSPPSGPSPRLSDVSRSYYSNHRNRAWDSWKAIRCKKWKEIEWQGRLEWALLKQEWKWIAV 138          
BLAST of EWM22532.1 vs. NCBI_GenBank
Match: gi|585111723|gb|EWM29203.1| (heat shock protein [Nannochloropsis gaditana])

HSP 1 Score: 212.616 bits (540), Expect = 6.443e-60
Identity = 114/263 (43.35%), Postives = 168/263 (63.88%), Query Frame = 0
Query:  113 KKWKEIEWQGRLEWALLKQ---EWKWIAMFFV----AEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWMLTP 368
            K  +E+      EWALLK+     +    FF+     EY +L  HN+VY+L+GK+WG  GPPPPL DLG+M  A   P  Y W++GF   +L+G++  L L RL L +V WG P+  +E R+ +      +P+P   + +RACQ +++G+ LRV++F+ TL PNPA YCH P WDPP+ + EI  RI   GSCGDLLFS HT H M +ML V R+AP +     L++ +M ++ +S+LAFK+HY+ D++ A+Y ++++W L P
Sbjct:  160 KSEREMRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQ--IEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCHGPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIWWLLP 420          
BLAST of EWM22532.1 vs. NCBI_GenBank
Match: gi|695382129|ref|XP_009517302.1| (hypothetical protein PHYSODRAFT_469105 [Phytophthora sojae] >gi|348690213|gb|EGZ30027.1| hypothetical protein PHYSODRAFT_469105 [Phytophthora sojae])

HSP 1 Score: 96.2857 bits (238), Expect = 1.710e-18
Identity = 73/267 (27.34%), Postives = 127/267 (47.57%), Query Frame = 0
Query:  123 RLEWALLKQEWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLG--IMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPF---------------------WDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWML 366
            ++E  LLKQEWK I    + +Y + I HN  Y+++G           L DLG  +M+    F  S S ++ F       +VLVL +               +  +  G        P   V + KR    L+I LV R +SF+ T  P+PAD+C   F                     ++PP  + E+  R++ +  CGDL+FS+HT++ ++++LT+ ++ P  Y +T + V   +++   ++A + HY+ D+ +A+Y   L W++
Sbjct:   18 KIEIQLLKQEWKIILPCVIMQYVHAIFHNLAYYIQGNYLTVEQ-RFTLHDLGYELMSELTGFAASISDILVFAAVFGPAIVLVLTI--------------PLFRQEPGR-------PRYLVIVLKRCLLQLSICLVFRCISFLVTALPSPADHCELKFNETCLAANPDDPVPCVIPNPDFNPP-TIGELFTRLDSLTGCGDLMFSSHTIYTVSLILTIWKYWPNKYGIT-IMVCVQIIIAFLIVASRKHYTLDVFSALYIVPLFWLV 260          
BLAST of EWM22532.1 vs. NCBI_GenBank
Match: gi|953500208|emb|CEG38849.1| (Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 95.1301 bits (235), Expect = 4.584e-18
Identity = 77/277 (27.80%), Postives = 129/277 (46.57%), Query Frame = 0
Query:  123 RLEWALLKQEWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLG--IMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPF---------------------WDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWMLTPEPTVADCD 376
            ++E  LL +EWK I    + +Y + I HN  Y+++GK + ++     L DLG  +M     F    S ++ F    + G  ++L L   L    P G P  +                  V + KR+    +I L  R++SF+ T  P  AD+C   F                     +DPP +  EI  R+  +  CGDL+FS+HT++ ++++LTV +  P  Y +T + V+  + +   ++A + HY+ D+ TA+Y   L+W LT E    D +
Sbjct:   46 KIELQLLSKEWKIILPCVIMQYVHAIFHNLAYYIQGK-YLSTEQRFTLHDLGFELMPELTGFAADISEILVF--AAIFGPAIILILTIPLFRQEP-GRPRYL------------------VIVLKRSLMQFSICLFFRIISFLVTALPGSADHCELKFDDSCLALNPGDPVSCVVPNPDFDPP-STSEIFTRLNALKGCGDLMFSSHTIYTVSLILTVWKFWPNRYGIT-IMVSVQIAIAFLIVASRKHYTLDVFTALYVVPLIW-LTQEAYYKDIN 297          
BLAST of EWM22532.1 vs. NCBI_GenBank
Match: gi|325189569|emb|CCA24055.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 93.2041 bits (230), Expect = 1.915e-17
Identity = 74/288 (25.69%), Postives = 139/288 (48.26%), Query Frame = 0
Query:  100 RNRAWDSWKAIRCKKWKEIEWQGRLEWALLKQEWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCH---------------------PPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWML 366
            R     +++  + + W  +    +LE A+  QEWK +    + +Y + + HN+ Y+++G +         L DLG      + P           YL+ G V    +  LL+++V       VL++     LR   I +    I KR    ++I LVLR+ SF+ T  P+PA++C                       P ++PP  + +   +I+ +  CGDL+FS+HT++ ++++L+V ++ P   L+ G+ V+  + +   ++A + HYS D+ TA+Y   ++W+L
Sbjct:    6 RKSEASNYQHFQRRNWANLINHVKLELAIALQEWKILVPCILMQYLHSVFHNWAYYIQGNVLSVEQRVM-LYDLGY----ALMPELTGTAAHLSEYLVFGAVFAPTI--LLISSV------LVLKQN---PLRPRFIAI----ILKRLLLQISIALVLRICSFMITSLPSPAEHCRLVFDEACKAANPNDYMKCVIPNPDFEPP-TVSQFFTKIDALRGCGDLMFSSHTIYTLSLILSVCKYWPHPLLI-GVMVSVQIAIAFLIVASRKHYSIDVFTALYVVPMIWLL 271          
BLAST of EWM22532.1 vs. NCBI_GenBank
Match: gi|698807560|ref|XP_009836809.1| (hypothetical protein H257_11531 [Aphanomyces astaci] >gi|574108365|gb|ETV73873.1| hypothetical protein H257_11531 [Aphanomyces astaci])

HSP 1 Score: 91.2781 bits (225), Expect = 7.077e-17
Identity = 76/280 (27.14%), Postives = 126/280 (45.00%), Query Frame = 0
Query:  111 RCKKWKEIEWQGRLEWALLKQEWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHP------------------------PFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWML 366
            RC+ W+E++    +E  +L  EWK +      +Y + I HN  YW++ K+  A     PL DLG      + P           YL+ G +     G  ++  V      +VL  +   T  +   P  F  I KR      + L+LR +SF+ T  P PA +C P                        P + PP  +  ILG ++ +  CGDL+FS+HT + M+M+L V ++  G   V  + +   V+    ++A + HYS D+++A+Y   ++W +
Sbjct:    9 RCRSWRELKAHAVIEVKVLLLEWKVVLFGLAWQYIHNIFHNIAYWMQTKLSVAQR--VPLYDLGF----ELLPELSESASHVSEYLVFGGI----FGPSIVLFV------SVLFIKASSTTSSSSPPRFFALIFKRVLLQTALCLMLRCISFMVTSLPGPASHCRPLYNQTCLDAFPSDPTASYRCVVGNPDFQPPMTVGSILGHVDALNGCGDLMFSSHTTYTMSMILAVWKYW-GSVPVLVVMLVLQVVTAFFIVAARKHYSLDVISALYVVPMVWFM 271          
BLAST of EWM22532.1 vs. NCBI_GenBank
Match: gi|1214698995|gb|OWZ11890.1| (Sphyngomyelin sunthetase [Phytophthora megakarya])

HSP 1 Score: 87.4261 bits (215), Expect = 1.818e-15
Identity = 69/264 (26.14%), Postives = 119/264 (45.08%), Query Frame = 0
Query:  123 RLEWALLKQEWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPF---------------------WDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWM 365
            ++E  LL QEWK I    + +Y + I HN  Y+++G  + ++     L DLG      I   +           + G  +VL L   L    P G P  +                  V + KR    L+I L+ R +SF+ T  P+PA +C   F                     ++PP ++ E   R++ +  CGDL+FS+HT++ ++ +LTV +  P  Y +T + V+  + +   ++A + HY+ D+ +A+Y   L W+
Sbjct:   18 KIELQLLAQEWKIILPCVIMQYVHAIFHNLAYYIQGH-YLSTEQRFTLYDLGYELMPEIHGFAADLSDILVFAAIFGPAIVLVLTIPLFRQEP-GRPRYL------------------VIVLKRCLLQLSICLIFRCISFLVTALPSPAAHCELKFDETCLAANPNDPVPCVIPNPEFNPP-SVSEWFTRLDSLNGCGDLMFSSHTIYTVSFILTVWKFWPNKYGIT-IMVSIQIAIAFLIVASRKHYTLDVFSALYIVPLFWL 259          
BLAST of EWM22532.1 vs. NCBI_GenBank
Match: gi|673034196|ref|XP_008871059.1| (hypothetical protein H310_07470 [Aphanomyces invadans] >gi|574473030|gb|ETW00034.1| hypothetical protein H310_07470 [Aphanomyces invadans])

HSP 1 Score: 85.8853 bits (211), Expect = 5.563e-15
Identity = 73/286 (25.52%), Postives = 121/286 (42.31%), Query Frame = 0
Query:  109 AIRCKKWKEIEWQGRLEWALLKQEWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMV----LVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPF------------------------WDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWML 366
            A RC+ W E++     E  +L  EWK +      +Y + I HN  YW++ K+  A   P  L DLG      + P           YL+ G +    ++L +  L++       P                 P  F  I KR      + L+LR +SF+ T  P PA +C P F                        + PP     I G ++ +  CGDL+FS+HT + ++M+L V ++   + L+  + V  ++     ++A + HYS D++ A+Y   ++W L
Sbjct:    7 ASRCRSWSELKAHVVFEVKVLLLEWKALLFGLAWQYIHNIFHNTAYWMQSKLSLAQRMP--LYDLGF----ELLPELTESEAHVSEYLVFGGIFGPSILLFVSVLVIKPSSPSAP-----------------PRFFSLIAKRVLLQTALCLMLRCISFMVTSLPGPAAHCRPTFNQTCIDAFPNDPSASFRCVVPNPDFQPPMTAGTIFGHVDALNGCGDLMFSSHTTYTLSMILAVWKYWRSVPLLVLMLVLQIITAFF-IVAARKHYSLDVIAALYVVPMVWFL 268          
The following BLAST results are available for this feature:
BLAST of EWM22532.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103057|gb|EWM22532.1|0.000e+0100.00hypothetical protein Naga_100290g2 [Nannochloropsi... [more]
gi|553190962|ref|XP_005855301.1|4.560e-16292.06heat shock protein [Nannochloropsis gaditana CCMP5... [more]
gi|553190971|ref|XP_005855304.1|4.321e-9198.55hypothetical protein NGA_0076400 [Nannochloropsis ... [more]
gi|585111723|gb|EWM29203.1|6.443e-6043.35heat shock protein [Nannochloropsis gaditana][more]
gi|695382129|ref|XP_009517302.1|1.710e-1827.34hypothetical protein PHYSODRAFT_469105 [Phytophtho... [more]
gi|953500208|emb|CEG38849.1|4.584e-1827.80Uncharacterized conserved protein [Plasmopara hals... [more]
gi|325189569|emb|CCA24055.1|1.915e-1725.69conserved hypothetical protein [Albugo laibachii N... [more]
gi|698807560|ref|XP_009836809.1|7.077e-1727.14hypothetical protein H257_11531 [Aphanomyces astac... [more]
gi|1214698995|gb|OWZ11890.1|1.818e-1526.14Sphyngomyelin sunthetase [Phytophthora megakarya][more]
gi|673034196|ref|XP_008871059.1|5.563e-1525.52hypothetical protein H310_07470 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8163rna8163Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications