EWM22535.1, cds8138 (CDS) Nannochloropsis gaditana

Overview
NameEWM22535.1
Unique Namecds8138
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:724329..724490 +
Alignment locationKK037247.1:724640..724862 +
Alignment locationKK037247.1:724983..725100 +
Alignment locationKK037247.1:725224..725404 +

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Properties
Property NameValue
Protein idEWM22535.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100290g1.9874.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:724329..724490 +
KK037247.1supercontigKK037247.1:724640..724862 +
KK037247.1supercontigKK037247.1:724983..725100 +
KK037247.1supercontigKK037247.1:725224..725404 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22535.1 vs. NCBI_GenBank
Match: gi|585103060|gb|EWM22535.1| (hypothetical protein Naga_100290g1 [Nannochloropsis gaditana])

HSP 1 Score: 454.136 bits (1167), Expect = 1.677e-161
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query:    1 MVTANKATTDVRLPAQAETYLAELSFYDSTHGNRGPRATSVKFTTAAAPSKKKKECIFDPFELKMKKSAKPGLAEKYQLAIVGDYPTTVRPFQTVKLTLDVVSEGPSTLMINVLAKSDFSWAGGKIVPVPPGANGLMTVLFDMEGDLVDKEEYSIDALLLKDAKDYKSAYVSDTVKKVFGVLTPVAPPLPDPFPPATLPAADMAKPQPGAPVAVEKELDPATGEVLN 227
            MVTANKATTDVRLPAQAETYLAELSFYDSTHGNRGPRATSVKFTTAAAPSKKKKECIFDPFELKMKKSAKPGLAEKYQLAIVGDYPTTVRPFQTVKLTLDVVSEGPSTLMINVLAKSDFSWAGGKIVPVPPGANGLMTVLFDMEGDLVDKEEYSIDALLLKDAKDYKSAYVSDTVKKVFGVLTPVAPPLPDPFPPATLPAADMAKPQPGAPVAVEKELDPATGEVLN
Sbjct:    1 MVTANKATTDVRLPAQAETYLAELSFYDSTHGNRGPRATSVKFTTAAAPSKKKKECIFDPFELKMKKSAKPGLAEKYQLAIVGDYPTTVRPFQTVKLTLDVVSEGPSTLMINVLAKSDFSWAGGKIVPVPPGANGLMTVLFDMEGDLVDKEEYSIDALLLKDAKDYKSAYVSDTVKKVFGVLTPVAPPLPDPFPPATLPAADMAKPQPGAPVAVEKELDPATGEVLN 227          
BLAST of EWM22535.1 vs. NCBI_GenBank
Match: gi|585110296|gb|EWM27955.1| (glucose sorbosone dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 133.265 bits (334), Expect = 3.776e-32
Identity = 75/191 (39.27%), Postives = 111/191 (58.12%), Query Frame = 0
Query:    1 MVTANKATTDVRLPAQAETYLAELSFYDSTHGNRGPRATSVKFTTAAAPSKKKKECIFD-PFELKMKKSAKPGLAEKYQLAIVGDYPTTVRPFQTVKLTLDVVSEGPSTLMINVLAKSDFSWAGGKIVPVPPGANGLMTVLFDMEGDLVDKEEYSIDALLLKDAKDYKSAYVSDT-VKKVFGVLTPVAPPL 189
            M TA K    + LP+    Y  ++S+  S+   RG R   V F++ A  +  K  C+    F  ++K S   GL ++YQ+A++G YPTT+   Q V+LT DVVS   S LM+N+L K+D+SW  GK+V +P     ++ V F ++ ++  K EY IDALL++DAKDY SA V DT    + G+  P A P+
Sbjct:  740 MTTAAKGAVVLPLPSAPADYTVDMSWVSSSRNARGIRTLPVAFSSKAELTTGKLACLAGTQFAEELKSSPIAGLGDQYQIALLGTYPTTLAQGQQVRLTFDVVSATASQLMVNILDKNDYSWLAGKVVNIPAKTERIVVVDFTIDTEVTHKAEYFIDALLIQDAKDYTSALVEDTSAGGIVGIAVPDATPV 930          
The following BLAST results are available for this feature:
BLAST of EWM22535.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585103060|gb|EWM22535.1|1.677e-161100.00hypothetical protein Naga_100290g1 [Nannochloropsi... [more]
gi|585110296|gb|EWM27955.1|3.776e-3239.27glucose sorbosone dehydrogenase [Nannochloropsis g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8162rna8162Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications