EWM22546.1, cds8127 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|585103085|gb|EWM22546.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 745.347 bits (1923), Expect = 0.000e+0 Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0
Query: 1 MEEGRRGSRYLNLNSNLNFMNGKGQVCKEGAGQGNGKKQEGRAAGGGGTGEGIWEVEMGKEGGEERGGGTVGTSTCLTSMAKEFLGTASALAPKPAAGAATDVSGRGRTNGPGFVGHAGFSAAEKHRGDGDGTEEEEYRAKGRAPSLPAQASLSTSSSLCLPAPGRRHARPPPLRAASSNALLSPALPPALPPPTPPLTASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLR 370
MEEGRRGSRYLNLNSNLNFMNGKGQVCKEGAGQGNGKKQEGRAAGGGGTGEGIWEVEMGKEGGEERGGGTVGTSTCLTSMAKEFLGTASALAPKPAAGAATDVSGRGRTNGPGFVGHAGFSAAEKHRGDGDGTEEEEYRAKGRAPSLPAQASLSTSSSLCLPAPGRRHARPPPLRAASSNALLSPALPPALPPPTPPLTASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLR
Sbjct: 1 MEEGRRGSRYLNLNSNLNFMNGKGQVCKEGAGQGNGKKQEGRAAGGGGTGEGIWEVEMGKEGGEERGGGTVGTSTCLTSMAKEFLGTASALAPKPAAGAATDVSGRGRTNGPGFVGHAGFSAAEKHRGDGDGTEEEEYRAKGRAPSLPAQASLSTSSSLCLPAPGRRHARPPPLRAASSNALLSPALPPALPPPTPPLTASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLR 370
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|585110775|gb|EWM28392.1| (type i inositol polyphosphate, partial [Nannochloropsis gaditana]) HSP 1 Score: 111.694 bits (278), Expect = 3.597e-23 Identity = 69/171 (40.35%), Postives = 93/171 (54.39%), Query Frame = 0
Query: 199 TASIFVSTYNCGSLPPSA-LSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
TA+IF ST N G + A L SL W+P + +Y IGVQE L L+Q LH HLGGP+ + M+ + VG T L G IAL +AR DV+RG F + A +V G NL+V + NKG V L FRYH STL AH +D ++++++RN +
Sbjct: 366 TATIFTSTLNLGGVKDIAHLGGSLEE------WLPPGYDVYCIGVQECIILDDLRQALHEHLGGPSEYTMFQAD---VGAATML---YGTIALTAFARASDVQRGAF---SAIDALTSRVKNGVNLVVTKTANKGMVGLAFRYHDSTLAFVTAHFASDSGGKTRLKRRNGD 521
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|585108788|gb|EWM26700.1| (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 109.383 bits (272), Expect = 3.018e-22 Identity = 70/183 (38.25%), Postives = 96/183 (52.46%), Query Frame = 0
Query: 187 LPPALPPPTPPL-TASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
LP PP P +F+STYN G AL P L AWIP +Y++G+QE + L + + HLGGP + MY + I G+ G IALLV ARTE+V+ F + ++ V +GKNL V A NKG V L FRY+ +T + A HL +D RS+++KRN +
Sbjct: 327 LPFFTDPPVPSFQDKQLFISTYNLGECKSKALG-----PEALAAWIPRDRDVYVLGLQECMVYRRLGEDVLAHLGGPEKYVMYRRAI---GSTYQSLGYHGLIALLVLARTEEVQANRF---LLHESKNSAVARGKNLGVTTAQNKGGVGLAFRYYDTTFALLACHLSSDLKGRSRLDKRNQD 498
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|553195022|ref|XP_005856074.1| (phosphatidylinositol- -trisphosphate 5-phosphatase 1, partial [Nannochloropsis gaditana CCMP526] >gi|422292983|gb|EKU20284.1| phosphatidylinositol- -trisphosphate 5-phosphatase 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 105.531 bits (262), Expect = 6.298e-22 Identity = 70/183 (38.25%), Postives = 96/183 (52.46%), Query Frame = 0
Query: 187 LPPALPPPTPPL-TASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
LP PP P +F+STYN G AL P L AWIP +Y++G+QE + L + + HLGGP + MY + I G+ G IALLV ARTE+V+ F + ++ V +GKNL V A NKG V L FRY+ +T + A HL +D RS+++KRN +
Sbjct: 145 LPFFTDPPVPSFQDKQLFISTYNLGECKSKALG-----PEALAAWIPRDRDVYVLGLQECMVYRRLGEDVLAHLGGPEKYVMYRRAI---GSTYQSLGYHGLIALLVLARTEEVQANRFLL---HESKNSAVARGKNLGVTTAQNKGGVGLAFRYYDTTFALLACHLSSDLKGRSRLDKRNQD 316
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|585109654|gb|EWM27419.1| (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 105.145 bits (261), Expect = 7.361e-21 Identity = 63/168 (37.50%), Postives = 92/168 (54.76%), Query Frame = 0
Query: 202 IFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNL-LVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
+F+ST N G S+P AW+P + LYI+G QE+ L +L+ LH HLGGPA ++M+ +EI G+ T L G IA+ ++ART D++RG V ++ V G +L ++ RA NKG V L RYH ++ AH AD S+V +RN +
Sbjct: 444 VFISTCNVGGCSDVRSFGSIP------AWVPRGYDLYILGFQEVLILDSLRIALHDHLGGPAVYEMFCREI---GDATILN---GMIAITIFARTVDIQRGA---VVVARSASGTVNTGMSLGIMGRAANKGTVGLSVRYHDLSIACITAHFAADKHGHSRVTRRNQD 596
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|669150250|ref|XP_008610687.1| (hypothetical protein SDRG_06671 [Saprolegnia diclina VS20] >gi|530737683|gb|EQC35925.1| hypothetical protein SDRG_06671 [Saprolegnia diclina VS20]) HSP 1 Score: 103.219 bits (256), Expect = 2.382e-20 Identity = 73/175 (41.71%), Postives = 92/175 (52.57%), Query Frame = 0
Query: 200 ASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHL---GGPA---AFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
A IF +T+NCG P L WIPL H +Y+IG+QE L + +H HL G P +F Y +EI TAL G IA+ V+ T+DV VFEM A +V GK+LLV RA NKGAV FRY+ ST V HL +D S+ SK+EKRN +
Sbjct: 308 AMIFATTFNCGEAGV---------PKNLDDWIPLGHDIYVIGLQECLYLDDYRAAIHAHLEHQGFPRKQRSFTAYSREIG--SRNTALGFH-GFIAITVFVATDDVSSRVFEMHLDASA---KVNCGKSLLVGRASNKGAVGFMFRYYNSTFAVINCHLASD-SKTSKLEKRNID 466
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|568020417|gb|ETL94546.1| (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 102.449 bits (254), Expect = 4.698e-20 Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 0
Query: 200 ASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHL---------GGPA----AFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
A+IFVST+N G + +P+ L WIPL H +Y+IG+QE L + L+ HL GPA F + +EI T+L G IA+ V+ ++ DV+ G F M P Q+V GK+L++ RA NKGAV FRY+ ++ A HL +D +SKV +RN +
Sbjct: 64 ANIFVSTFNMGE--------ARLTPAQLDKWIPLGHDIYVIGLQECLHLTNTRSLIRQHLEGGRPRPATSGPARRASKFHQFNREIG--SKNTSLGYH-GHIAITVFIKSSDVDNGAFYM---PPVVQQEVNVGKSLVLGRASNKGAVGFAFRYYDTSFAFVACHLSSDPKGKSKVRRRNRD 231
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|570328801|gb|ETO76749.1| (hypothetical protein, variant [Phytophthora parasitica P1976]) HSP 1 Score: 102.449 bits (254), Expect = 4.921e-20 Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 0
Query: 200 ASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHL---------GGPA----AFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
A+IFVST+N G + +P+ L WIPL H +Y+IG+QE L + L+ HL GPA F + +EI T+L G IA+ V+ ++ DV+ G F M P Q+V GK+L++ RA NKGAV FRY+ ++ A HL +D +SKV +RN +
Sbjct: 64 ANIFVSTFNMGE--------ARLTPAQLDKWIPLGHDIYVIGLQECLHLTNTRSLIRQHLEGGRPRPATSGPARRASKFHQFNREIG--SKNTSLGYH-GHIAITVFIKSSDVDNGAFYM---PPVVQQEVNVGKSLVLGRASNKGAVGFAFRYYDTSFAFVACHLSSDPKGKSKVRRRNRD 231
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|675191345|ref|XP_008904557.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568095352|gb|ETN10120.1| hypothetical protein, variant [Phytophthora parasitica INRA-310]) HSP 1 Score: 102.449 bits (254), Expect = 5.043e-20 Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 0
Query: 200 ASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHL---------GGPA----AFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
A+IFVST+N G + +P+ L WIPL H +Y+IG+QE L + L+ HL GPA F + +EI T+L G IA+ V+ ++ DV+ G F M P Q+V GK+L++ RA NKGAV FRY+ ++ A HL +D +SKV +RN +
Sbjct: 92 ANIFVSTFNMGE--------ARLTPAQLDKWIPLGHDIYVIGLQECLHLTNTRSLIRQHLEGGRPRPATSGPARRASKFHQFNREIG--SKNTSLGYH-GHIAITVFIKSSDVDNGAFYM---PPVVQQEVNVGKSLVLGRASNKGAVGFAFRYYDTSFAFVACHLSSDPKGKSKVRRRNRD 259
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|566025131|gb|ETI48042.1| (hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567962440|gb|ETK87965.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567991193|gb|ETL41407.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568050849|gb|ETM47777.1| hypothetical protein, variant [Phytophthora parasitica] >gi|570952542|gb|ETP17799.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 102.449 bits (254), Expect = 5.060e-20 Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 0
Query: 200 ASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHL---------GGPA----AFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
A+IFVST+N G + +P+ L WIPL H +Y+IG+QE L + L+ HL GPA F + +EI T+L G IA+ V+ ++ DV+ G F M P Q+V GK+L++ RA NKGAV FRY+ ++ A HL +D +SKV +RN +
Sbjct: 64 ANIFVSTFNMGE--------ARLTPAQLDKWIPLGHDIYVIGLQECLHLTNTRSLIRQHLEGGRPRPATSGPARRASKFHQFNREIG--SKNTSLGYH-GHIAITVFIKSSDVDNGAFYM---PPVVQQEVNVGKSLVLGRASNKGAVGFAFRYYDTSFAFVACHLSSDPKGKSKVRRRNRD 231 The following BLAST results are available for this feature:
BLAST of EWM22546.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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