EWM22546.1, cds8127 (CDS) Nannochloropsis gaditana

Overview
NameEWM22546.1
Unique Namecds8127
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:698532..699644 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22546.1
ProductEndonuclease/exonuclease/phosphatase
Orig transcript idgnl|cribi|Naga_101704g1.10036.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:698532..699644 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
Homology
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|585103085|gb|EWM22546.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 745.347 bits (1923), Expect = 0.000e+0
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0
Query:    1 MEEGRRGSRYLNLNSNLNFMNGKGQVCKEGAGQGNGKKQEGRAAGGGGTGEGIWEVEMGKEGGEERGGGTVGTSTCLTSMAKEFLGTASALAPKPAAGAATDVSGRGRTNGPGFVGHAGFSAAEKHRGDGDGTEEEEYRAKGRAPSLPAQASLSTSSSLCLPAPGRRHARPPPLRAASSNALLSPALPPALPPPTPPLTASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLR 370
            MEEGRRGSRYLNLNSNLNFMNGKGQVCKEGAGQGNGKKQEGRAAGGGGTGEGIWEVEMGKEGGEERGGGTVGTSTCLTSMAKEFLGTASALAPKPAAGAATDVSGRGRTNGPGFVGHAGFSAAEKHRGDGDGTEEEEYRAKGRAPSLPAQASLSTSSSLCLPAPGRRHARPPPLRAASSNALLSPALPPALPPPTPPLTASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLR
Sbjct:    1 MEEGRRGSRYLNLNSNLNFMNGKGQVCKEGAGQGNGKKQEGRAAGGGGTGEGIWEVEMGKEGGEERGGGTVGTSTCLTSMAKEFLGTASALAPKPAAGAATDVSGRGRTNGPGFVGHAGFSAAEKHRGDGDGTEEEEYRAKGRAPSLPAQASLSTSSSLCLPAPGRRHARPPPLRAASSNALLSPALPPALPPPTPPLTASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNANLR 370          
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|585110775|gb|EWM28392.1| (type i inositol polyphosphate, partial [Nannochloropsis gaditana])

HSP 1 Score: 111.694 bits (278), Expect = 3.597e-23
Identity = 69/171 (40.35%), Postives = 93/171 (54.39%), Query Frame = 0
Query:  199 TASIFVSTYNCGSLPPSA-LSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
            TA+IF ST N G +   A L  SL        W+P  + +Y IGVQE   L  L+Q LH HLGGP+ + M+  +   VG  T L    G IAL  +AR  DV+RG F   +   A   +V  G NL+V +  NKG V L FRYH STL    AH  +D   ++++++RN +
Sbjct:  366 TATIFTSTLNLGGVKDIAHLGGSLEE------WLPPGYDVYCIGVQECIILDDLRQALHEHLGGPSEYTMFQAD---VGAATML---YGTIALTAFARASDVQRGAF---SAIDALTSRVKNGVNLVVTKTANKGMVGLAFRYHDSTLAFVTAHFASDSGGKTRLKRRNGD 521          
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|585108788|gb|EWM26700.1| (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 109.383 bits (272), Expect = 3.018e-22
Identity = 70/183 (38.25%), Postives = 96/183 (52.46%), Query Frame = 0
Query:  187 LPPALPPPTPPL-TASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
            LP    PP P      +F+STYN G     AL      P  L AWIP    +Y++G+QE    + L + +  HLGGP  + MY + I   G+        G IALLV ARTE+V+   F    + ++    V +GKNL V  A NKG V L FRY+ +T  + A HL +D   RS+++KRN +
Sbjct:  327 LPFFTDPPVPSFQDKQLFISTYNLGECKSKALG-----PEALAAWIPRDRDVYVLGLQECMVYRRLGEDVLAHLGGPEKYVMYRRAI---GSTYQSLGYHGLIALLVLARTEEVQANRF---LLHESKNSAVARGKNLGVTTAQNKGGVGLAFRYYDTTFALLACHLSSDLKGRSRLDKRNQD 498          
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|553195022|ref|XP_005856074.1| (phosphatidylinositol- -trisphosphate 5-phosphatase 1, partial [Nannochloropsis gaditana CCMP526] >gi|422292983|gb|EKU20284.1| phosphatidylinositol- -trisphosphate 5-phosphatase 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 105.531 bits (262), Expect = 6.298e-22
Identity = 70/183 (38.25%), Postives = 96/183 (52.46%), Query Frame = 0
Query:  187 LPPALPPPTPPL-TASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
            LP    PP P      +F+STYN G     AL      P  L AWIP    +Y++G+QE    + L + +  HLGGP  + MY + I   G+        G IALLV ARTE+V+   F +    ++    V +GKNL V  A NKG V L FRY+ +T  + A HL +D   RS+++KRN +
Sbjct:  145 LPFFTDPPVPSFQDKQLFISTYNLGECKSKALG-----PEALAAWIPRDRDVYVLGLQECMVYRRLGEDVLAHLGGPEKYVMYRRAI---GSTYQSLGYHGLIALLVLARTEEVQANRFLL---HESKNSAVARGKNLGVTTAQNKGGVGLAFRYYDTTFALLACHLSSDLKGRSRLDKRNQD 316          
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|585109654|gb|EWM27419.1| (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 105.145 bits (261), Expect = 7.361e-21
Identity = 63/168 (37.50%), Postives = 92/168 (54.76%), Query Frame = 0
Query:  202 IFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHLGGPAAFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNL-LVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
            +F+ST N G         S+P      AW+P  + LYI+G QE+  L +L+  LH HLGGPA ++M+ +EI   G+ T L    G IA+ ++ART D++RG      V ++    V  G +L ++ RA NKG V L  RYH  ++    AH  AD    S+V +RN +
Sbjct:  444 VFISTCNVGGCSDVRSFGSIP------AWVPRGYDLYILGFQEVLILDSLRIALHDHLGGPAVYEMFCREI---GDATILN---GMIAITIFARTVDIQRGA---VVVARSASGTVNTGMSLGIMGRAANKGTVGLSVRYHDLSIACITAHFAADKHGHSRVTRRNQD 596          
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|669150250|ref|XP_008610687.1| (hypothetical protein SDRG_06671 [Saprolegnia diclina VS20] >gi|530737683|gb|EQC35925.1| hypothetical protein SDRG_06671 [Saprolegnia diclina VS20])

HSP 1 Score: 103.219 bits (256), Expect = 2.382e-20
Identity = 73/175 (41.71%), Postives = 92/175 (52.57%), Query Frame = 0
Query:  200 ASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHL---GGPA---AFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
            A IF +T+NCG             P  L  WIPL H +Y+IG+QE   L   +  +H HL   G P    +F  Y +EI      TAL    G IA+ V+  T+DV   VFEM     A   +V  GK+LLV RA NKGAV   FRY+ ST  V   HL +D S+ SK+EKRN +
Sbjct:  308 AMIFATTFNCGEAGV---------PKNLDDWIPLGHDIYVIGLQECLYLDDYRAAIHAHLEHQGFPRKQRSFTAYSREIG--SRNTALGFH-GFIAITVFVATDDVSSRVFEMHLDASA---KVNCGKSLLVGRASNKGAVGFMFRYYNSTFAVINCHLASD-SKTSKLEKRNID 466          
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|568020417|gb|ETL94546.1| (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 102.449 bits (254), Expect = 4.698e-20
Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 0
Query:  200 ASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHL---------GGPA----AFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
            A+IFVST+N G         +  +P+ L  WIPL H +Y+IG+QE   L   + L+  HL          GPA     F  + +EI      T+L    G IA+ V+ ++ DV+ G F M   P    Q+V  GK+L++ RA NKGAV   FRY+ ++    A HL +D   +SKV +RN +
Sbjct:   64 ANIFVSTFNMGE--------ARLTPAQLDKWIPLGHDIYVIGLQECLHLTNTRSLIRQHLEGGRPRPATSGPARRASKFHQFNREIG--SKNTSLGYH-GHIAITVFIKSSDVDNGAFYM---PPVVQQEVNVGKSLVLGRASNKGAVGFAFRYYDTSFAFVACHLSSDPKGKSKVRRRNRD 231          
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|570328801|gb|ETO76749.1| (hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 102.449 bits (254), Expect = 4.921e-20
Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 0
Query:  200 ASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHL---------GGPA----AFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
            A+IFVST+N G         +  +P+ L  WIPL H +Y+IG+QE   L   + L+  HL          GPA     F  + +EI      T+L    G IA+ V+ ++ DV+ G F M   P    Q+V  GK+L++ RA NKGAV   FRY+ ++    A HL +D   +SKV +RN +
Sbjct:   64 ANIFVSTFNMGE--------ARLTPAQLDKWIPLGHDIYVIGLQECLHLTNTRSLIRQHLEGGRPRPATSGPARRASKFHQFNREIG--SKNTSLGYH-GHIAITVFIKSSDVDNGAFYM---PPVVQQEVNVGKSLVLGRASNKGAVGFAFRYYDTSFAFVACHLSSDPKGKSKVRRRNRD 231          
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|675191345|ref|XP_008904557.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568095352|gb|ETN10120.1| hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 102.449 bits (254), Expect = 5.043e-20
Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 0
Query:  200 ASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHL---------GGPA----AFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
            A+IFVST+N G         +  +P+ L  WIPL H +Y+IG+QE   L   + L+  HL          GPA     F  + +EI      T+L    G IA+ V+ ++ DV+ G F M   P    Q+V  GK+L++ RA NKGAV   FRY+ ++    A HL +D   +SKV +RN +
Sbjct:   92 ANIFVSTFNMGE--------ARLTPAQLDKWIPLGHDIYVIGLQECLHLTNTRSLIRQHLEGGRPRPATSGPARRASKFHQFNREIG--SKNTSLGYH-GHIAITVFIKSSDVDNGAFYM---PPVVQQEVNVGKSLVLGRASNKGAVGFAFRYYDTSFAFVACHLSSDPKGKSKVRRRNRD 259          
BLAST of EWM22546.1 vs. NCBI_GenBank
Match: gi|566025131|gb|ETI48042.1| (hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567962440|gb|ETK87965.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567991193|gb|ETL41407.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568050849|gb|ETM47777.1| hypothetical protein, variant [Phytophthora parasitica] >gi|570952542|gb|ETP17799.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1])

HSP 1 Score: 102.449 bits (254), Expect = 5.060e-20
Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 0
Query:  200 ASIFVSTYNCGSLPPSALSSSLPSPSFLHAWIPLHHHLYIIGVQELKGLQALKQLLHTHL---------GGPA----AFQMYGQEISVVGNGTALAERLGAIALLVYARTEDVERGVFEMTAVPKAGGQQVLQGKNLLVCRAGNKGAVCLPFRYHQSTLVVAAAHLPADGSRRSKVEKRNAN 368
            A+IFVST+N G         +  +P+ L  WIPL H +Y+IG+QE   L   + L+  HL          GPA     F  + +EI      T+L    G IA+ V+ ++ DV+ G F M   P    Q+V  GK+L++ RA NKGAV   FRY+ ++    A HL +D   +SKV +RN +
Sbjct:   64 ANIFVSTFNMGE--------ARLTPAQLDKWIPLGHDIYVIGLQECLHLTNTRSLIRQHLEGGRPRPATSGPARRASKFHQFNREIG--SKNTSLGYH-GHIAITVFIKSSDVDNGAFYM---PPVVQQEVNVGKSLVLGRASNKGAVGFAFRYYDTSFAFVACHLSSDPKGKSKVRRRNRD 231          
The following BLAST results are available for this feature:
BLAST of EWM22546.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103085|gb|EWM22546.1|0.000e+0100.00Endonuclease/exonuclease/phosphatase [Nannochlorop... [more]
gi|585110775|gb|EWM28392.1|3.597e-2340.35type i inositol polyphosphate, partial [Nannochlor... [more]
gi|585108788|gb|EWM26700.1|3.018e-2238.25type ii inositol- -trisphosphate 5-phosphatase [Na... [more]
gi|553195022|ref|XP_005856074.1|6.298e-2238.25phosphatidylinositol- -trisphosphate 5-phosphatase... [more]
gi|585109654|gb|EWM27419.1|7.361e-2137.50type ii inositol- -trisphosphate 5-phosphatase [Na... [more]
gi|669150250|ref|XP_008610687.1|2.382e-2041.71hypothetical protein SDRG_06671 [Saprolegnia dicli... [more]
gi|568020417|gb|ETL94546.1|4.698e-2036.26hypothetical protein, variant [Phytophthora parasi... [more]
gi|570328801|gb|ETO76749.1|4.921e-2036.26hypothetical protein, variant [Phytophthora parasi... [more]
gi|675191345|ref|XP_008904557.1|5.043e-2036.26hypothetical protein, variant [Phytophthora parasi... [more]
gi|566025131|gb|ETI48042.1|5.060e-2036.26hypothetical protein, variant [Phytophthora parasi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8151rna8151Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications