EWM22548.1, cds8124 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22548.1 vs. NCBI_GenBank
Match: gi|585103088|gb|EWM22548.1| (hypothetical protein Naga_100378g3 [Nannochloropsis gaditana]) HSP 1 Score: 434.876 bits (1117), Expect = 3.647e-154 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query: 1 MAQVEVLQRIGRVFLQVGNVQEARRFWNHAEILVLKAKSCALSAQQFSSQGHEEQAMPAFPPPRPPSRPPYFLGWAESQVGMGKGLLAVAEGRWEDAQRNFQKVAAAERTRLLEDPFVFDPALSPSPGSSGPTAPPFLSPSPWPSLLLPSPEDNLLLPAIINLAVLSLHRGNVHAAIHILENFIREDPPRNMTENLVLNLSYFYDLVGDKYVPVL 215
MAQVEVLQRIGRVFLQVGNVQEARRFWNHAEILVLKAKSCALSAQQFSSQGHEEQAMPAFPPPRPPSRPPYFLGWAESQVGMGKGLLAVAEGRWEDAQRNFQKVAAAERTRLLEDPFVFDPALSPSPGSSGPTAPPFLSPSPWPSLLLPSPEDNLLLPAIINLAVLSLHRGNVHAAIHILENFIREDPPRNMTENLVLNLSYFYDLVGDKYVPVL
Sbjct: 1 MAQVEVLQRIGRVFLQVGNVQEARRFWNHAEILVLKAKSCALSAQQFSSQGHEEQAMPAFPPPRPPSRPPYFLGWAESQVGMGKGLLAVAEGRWEDAQRNFQKVAAAERTRLLEDPFVFDPALSPSPGSSGPTAPPFLSPSPWPSLLLPSPEDNLLLPAIINLAVLSLHRGNVHAAIHILENFIREDPPRNMTENLVLNLSYFYDLVGDKYVPVL 215
BLAST of EWM22548.1 vs. NCBI_GenBank
Match: gi|1210512558|dbj|GAX28415.1| (hypothetical protein FisN_4Hh394 [Fistulifera solaris]) HSP 1 Score: 75.0998 bits (183), Expect = 2.949e-12 Identity = 56/207 (27.05%), Postives = 95/207 (45.89%), Query Frame = 0
Query: 3 QVEVLQRIGRVFLQVGNVQEARRFWNHAEILVLKAKSCALSAQQFSSQGHEEQAMPAFPPPRPPSRPPYFLGWAESQVGMGKGLLAVAEGRWEDAQRNFQKVAAAERTRLLEDPFVFDPALSPSPGSSGPTAPPFLSPSPWPSLLLPSPEDNLLLPAIINLAVLSLHRGNVHAAIHILENFIREDPPRNMTENLVLNLSYFYDLVGD 209
+ E+L + GRVFLQ+G EAR+ ++ A + + S + + Q +P P + + + GLL +EG++ +A F+ R R+ + + SS L P P + +PED L AI N+++ +L+ N+H AI ++E+ IREDP + +TE + LNL Y+L +
Sbjct: 352 RCEILSQQGRVFLQLGATNEARQIFDMA-----RDAATHGSVAEETMQVMRHSLVPFVP----------------AHMSLNDGLLKFSEGQYNEALECFRHCVDLIRQRI---------EMKSAVASSNSFDMKALIPMPTGA----APEDALYSEAINNMSLCALYTCNLHEAILLMESLIREDPIKFLTERVCLNLCILYELSNE 524
BLAST of EWM22548.1 vs. NCBI_GenBank
Match: gi|1210521978|dbj|GAX19413.1| (hypothetical protein FisN_4Lh394 [Fistulifera solaris]) HSP 1 Score: 74.7146 bits (182), Expect = 4.611e-12 Identity = 52/207 (25.12%), Postives = 95/207 (45.89%), Query Frame = 0
Query: 3 QVEVLQRIGRVFLQVGNVQEARRFWNHAEILVLKAKSCALSAQQFSSQGHEEQAMPAFPPPRPPSRPPYFLGWAESQVGMGKGLLAVAEGRWEDAQRNFQKVAAAERTRLLEDPFVFDPALSPSPGSSGPTAPPFLSPSPWPSLLLPSPEDNLLLPAIINLAVLSLHRGNVHAAIHILENFIREDPPRNMTENLVLNLSYFYDLVGD 209
+ E+L + GR+FLQ+G EAR+ ++ A + + +S + + Q +P P + + + GLL +EG++ +A F+ R+ + + S + L P P + +PE+ L AI N+++ +L+ N+H AI ++E+ IREDP + +TE + LNL Y+L +
Sbjct: 352 RCEILSQQGRIFLQLGATHEARQIFDMA-----RDAATHVSVTEETVQLMRHSIVPFIP----------------AHISLNNGLLKFSEGQYNEALECFRHCVDLISQRI---------EMKSAVASLNSSEVKVLIPMPTGA----APEEALYSEAINNMSLCALYTCNLHEAILLMESLIREDPTKFLTERVCLNLCILYELSNE 524 The following BLAST results are available for this feature:
BLAST of EWM22548.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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