EWM22550.1, cds8122 (CDS) Nannochloropsis gaditana

Overview
NameEWM22550.1
Unique Namecds8122
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:681585..683117 -

Link to JBrowse

Properties
Property NameValue
Start range681585
Start range.
Protein idEWM22550.1
Productsmall nucleolar ribonucleoprotein complex subunit
Partialtrue
Orig transcript idgnl|cribi|Naga_101173g2.3224.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:681585..683117 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR027145PWP2
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM22550.1 vs. NCBI_GenBank
Match: gi|585103091|gb|EWM22550.1| (small nucleolar ribonucleoprotein complex subunit, partial [Nannochloropsis gaditana])

HSP 1 Score: 1030.01 bits (2662), Expect = 0.000e+0
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0
Query:    1 MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWVIDPSTQTWKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEVGRGRRREGGWEG 511
            MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWVIDPSTQTWKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEVGRGRRREGGWEG
Sbjct:    1 MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWVIDPSTQTWKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEVGRGRRREGGWEG 511          
BLAST of EWM22550.1 vs. NCBI_GenBank
Match: gi|553177097|ref|XP_005852434.1| (periodic tryptophan protein 2, partial [Nannochloropsis gaditana CCMP526] >gi|422296099|gb|EKU23398.1| periodic tryptophan protein 2, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 901.738 bits (2329), Expect = 0.000e+0
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0
Query:   32 PVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWVIDPSTQTWKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPA 473
            PVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWVIDPSTQTWKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPA
Sbjct:  333 PVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWVIDPSTQTWKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPA 774          
BLAST of EWM22550.1 vs. NCBI_GenBank
Match: gi|1183316929|gb|ORX46795.1| (WD40 repeat-like protein [Hesseltinella vesiculosa])

HSP 1 Score: 454.907 bits (1169), Expect = 4.031e-148
Identity = 231/518 (44.59%), Postives = 317/518 (61.20%), Query Frame = 0
Query:    1 MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAW-------------------VIDPSTQTWKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEV 499
            M+  ++ S L G V++ GN+V++PDGN + SPV NRV VFDL+ + S  LP+E    I R+A+SPN   L+TVD  GY +L + +R  +L R+  K  +KV+D+VFSP+G++ AVT  ++ +VW+ PG  REF+PFVLHRT+  H D+I+ ++W+P   Y LT SKD+T +++SL+P+  A F P TLSGHR  ++GA+FS+                                                    IY+I++DG L+ W                    ID     W+ H++H FQ+     V S  +H               P + L+VVGFS+GVFGLY++P+   +H+LS+S  +I T+A+N TGEWLA GC  LGQLLVWEWQSETYVLKQQGH   +N +AY+PDGQ M TGG+D KVK+W+ +SGF FVTF+ H + V A++F   GQ V SAS+DGTVRA DL+RYRNFRT T+P P Q  SLAVDPSGE+VCAG+ + FE+
Sbjct:    1 MKSSFKFSNLCGTVYTKGNLVYTPDGNCVVSPVGNRVSVFDLVNNKSYTLPFEMRRDISRIALSPNATLLITVDEAGYAYLINFNRQTVLHRINFK--SKVKDIVFSPNGKYVAVTHGKEVKVWKAPGFTREFSPFVLHRTYTGHFDDIIHISWSPDSNYFLTSSKDMTSKMYSLNPI--ADFKPVTLSGHRAAVLGAYFSSDMA------------------------------------------------HIYTISKDGALFHWRHASFADVRGLEEDELEEDFIDHVR--WRVHEKHYFQQGHGVQVKSCQFH---------------PQSNLVVVGFSNGVFGLYEVPSFVNIHSLSISQHKISTIAINPTGEWLAFGCRTLGQLLVWEWQSETYVLKQQGHYYDMNTLAYAPDGQTMVTGGDDGKVKVWNASSGFCFVTFSDHKSGVQAVSFAKQGQVVFSASMDGTVRAFDLVRYRNFRTFTSPNPVQFTSLAVDPSGEIVCAGTMDSFEI 449          
BLAST of EWM22550.1 vs. NCBI_GenBank
Match: gi|673033660|ref|XP_008870791.1| (hypothetical protein H310_07223 [Aphanomyces invadans] >gi|574473653|gb|ETW00656.1| hypothetical protein H310_07223 [Aphanomyces invadans])

HSP 1 Score: 444.121 bits (1141), Expect = 5.663e-144
Identity = 238/516 (46.12%), Postives = 305/516 (59.11%), Query Frame = 0
Query:    1 MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWVID----PSTQT-------------WKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEV 499
            M+F Y  S L G V++ GN+VF+PDGN+L SPV NR+ VFDLI + S    +E    ++ +AVS + R L+ VD  G+  L ++ +GI+L R   K P  VR L FSPD ++ AV+   + QVW+ PG  REFAPFV HRT+G H  ++LS+ W+P  ++ L+ +KDL+VR+WSL P P   FTP TL GHRD +VGA+FSA G                                                  IY++ARDG  Y W  D    P                 W    +H F K   A V  V +HA                T LLVVGF +G FGLY LP    +HTLSVS  +I +VA+N +GEWLAL    LGQLLVWEW+SETYVLKQQGH   +N +AYSPDG+++ATG +DAK+KLW T SGF +VTF  H APVT +AF  +GQAV+S SLDGTVRA DL RY+NFRTLTTP+P Q L LA+D SG++VCAG+ +PF +
Sbjct:    1 MKFSYEFSHLCGTVYTQGNLVFTPDGNSLLSPVGNRITVFDLINNASRTFAFESRKNVQTIAVSLDSRLLVAVDEDGHSLLVNLKKGIVLYRFNFKAP--VRTLRFSPDNRYLAVSHGTKIQVWKAPGLKREFAPFVHHRTYGGHHGDVLSIEWSPDSKFFLSSAKDLSVRLWSLQPYPN--FTPYTLVGHRDVVVGAYFSADGQT------------------------------------------------IYTVARDGGAYLWEHDGGVAPDEDVDEDEIPLVARGVKWSTKHKHVF-KMEYAKVDCVTFHA---------------ATELLVVGFGNGTFGLYSLPDFQDIHTLSVSQHRISSVAINASGEWLALASQHLGQLLVWEWKSETYVLKQQGHYFDLNVLAYSPDGRLLATGADDAKLKLWDTTSGFCYVTFHEHTAPVTGVAFTANGQAVVSCSLDGTVRAFDLNRYKNFRTLTTPSPVQFLCLALDTSGQLVCAGTLDPFHI 448          
BLAST of EWM22550.1 vs. NCBI_GenBank
Match: gi|1027021822|ref|XP_016604859.1| (hypothetical protein SPPG_08020 [Spizellomyces punctatus DAOM BR117] >gi|907090395|gb|KNC96819.1| hypothetical protein SPPG_08020 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 443.736 bits (1140), Expect = 1.042e-143
Identity = 238/528 (45.08%), Postives = 314/528 (59.47%), Query Frame = 0
Query:    1 MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWVI---------------DPST--------------QTWKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEV 499
            M+  Y+ S L G V+  GNV+F+PDGN++ SPV NRV VFDL+ + S  LP+E+   I R+A+SPNG  L+TVD  G   L +  R ++L     K P  VRDLVFSPDG++ AVT ++   VWRTPG   EFAPF+LHR +  H D+++ L+W+P  ++ LTGSKD+T R++++ P+    F  A L+GHRD +VGA+FS                                  K  +TV              Y++ +DG L+ W +               +P+T              + W+   RH F ++  A VVSV +HA SS               LLVVGF+ G+FG+++LP    +HTLS+S  +I   A+N +GEWLA G + LGQLLVWEWQSE+YVLKQQGH   ++ ++YS DGQ + TGG+D KVKLW+T +GF FVTFT H A VTA+ F   GQ V SASLDGTVRA DL+RYRNFRT TTP P Q   LAVDPSGEVVCAGSS+ FE+
Sbjct:    1 MKLNYKFSNLCGTVYKRGNVIFTPDGNSVVSPVGNRVTVFDLVSNKSHTLPFENRKDIVRLALSPNGSLLITVDEDGRALLVNFQRQVVLHHFNFKTP--VRDLVFSPDGRYLAVTHEKHVHVWRTPGFTLEFAPFILHRKYPGHYDDVVHLSWSPDSRFFLTGSKDMTARLYAVDPIEG--FHGAVLAGHRDTVVGAWFS----------------------------------KDVNTV--------------YTVGKDGALFEWNMKEEMEGEDESGMNGEEPATAKKRKVGDGERIRVKKWRTSARHYFNQNH-AKVVSVAFHAASS---------------LLVVGFTSGIFGIWELPDFTNIHTLSISQKKITATAINSSGEWLAFGSSALGQLLVWEWQSESYVLKQQGHHHEMSCLSYSQDGQFVITGGDDGKVKLWNTQTGFCFVTFTEHSAGVTAVEFAKQGQIVFSASLDGTVRAFDLIRYRNFRTFTTPTPVQFSCLAVDPSGEVVCAGSSDTFEI 460          
BLAST of EWM22550.1 vs. NCBI_GenBank
Match: gi|1183505562|gb|ORZ29110.1| (WD40 repeat-like protein [Lobosporangium transversale])

HSP 1 Score: 441.039 bits (1133), Expect = 7.623e-143
Identity = 228/499 (45.69%), Postives = 307/499 (61.52%), Query Frame = 0
Query:    1 MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWVIDPSTQTWKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEV 499
            M+  ++ S L G V+  GN++F+PDGN++ SPV NR+ VFDL+ + +T  PYE+   I R+A+SPN   L++VD  G   L +  R ++L     K   KV D+ FSPDG++FA T  +Q QVW+TPG  REF P VLHR +  H D+++S++WAP  ++ +T SKD++ RI+S++P+    F P TLSGHRD ++GA+F+     E      +S  GA          P     +  D                  +  D  +    ID   + W    RH F +   A VV   YHA SS               ++VVGFS+GVFG+++LPT   +HTLS+S  +I +VA+N TGEWLA G + LGQLLVWEWQSE+YVLKQQGH   +N ++YS DGQ + TGG+D KVK+W+T SGF FVTF+ H + +TA  F  +GQ V SASLDGTVRA DL+RYRNFRT T+P P Q  SLAVDPSGE+VCAGS   FE+
Sbjct:    1 MKSDFKFSNLCGTVYKQGNLIFTPDGNSILSPVGNRLTVFDLVNNKATTFPYENRKNIDRIALSPNSTLLISVDEDGRAILVNYHRQVVLHHFNFKA--KVHDIQFSPDGKYFAATHGKQIQVWKTPGFHREFQPIVLHRRYTGHFDDVISISWAPDSKFFVTTSKDMSARIYSVNPIEG--FVPFTLSGHRDSVIGAWFTQ----EQNALYTVSKDGALFEWRYQSIAPKTQQDENDD------------------VGNDNSME---IDEVPRRWTAVQRHFFYQDH-AKVVCAAYHASSS---------------MMVVGFSNGVFGIWELPTFNNIHTLSISQKKIDSVAINRTGEWLAFGASKLGQLLVWEWQSESYVLKQQGHFYDMNCLSYSSDGQSVVTGGDDGKVKVWNTISGFCFVTFSDHTSRITATEFAKNGQIVFSASLDGTVRAFDLVRYRNFRTFTSPTPVQFSSLAVDPSGEIVCAGSQNTFEI 454          
BLAST of EWM22550.1 vs. NCBI_GenBank
Match: gi|1021056659|emb|SAM07530.1| (hypothetical protein [Absidia glauca])

HSP 1 Score: 441.039 bits (1133), Expect = 8.133e-143
Identity = 223/519 (42.97%), Postives = 307/519 (59.15%), Query Frame = 0
Query:    1 MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWV---------IDPSTQT-----------WKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEV 499
            M+  Y+ S L G V+S GN++F+PDGN++ SPV NRV VFDL+ + S  LP+E    I  +A+SP    L+TVD  G+ FL +  R  +L ++  K   KV+ + FSP+G++ A+T     QVW+ PG  REFAPFVLHR +  H DE+L ++W+P  +Y LT S+D+T RI+S +P P   FTP TLSGHR  ++GA+FS +                                                   IY++++DG L+ W          +D   +            W+   +H F +     V S  ++A S+               L++ GF++G+FGLY++P+   +HTLS+S  +I  VA+N +GEWLA GCA +GQLLVWEWQSETYVLKQQGH   +NA+ YSPDGQ MATGG+D KVK+W+  SGF FVTF+ H++ V A+ F   GQ + SASLDGTVRA DL+RYRNFRT T+P P Q  SLAVDPSG++VCAG+ + FE+
Sbjct:    1 MKSAYKFSNLCGTVYSNGNLIFTPDGNSIVSPVGNRVSVFDLVNNKSCTLPFEMRKNIACMALSPQATLLITVDESGHGFLINYPRQTVLHQINFKA--KVKSIKFSPNGKYVAITHGNHVQVWKAPGFTREFAPFVLHRNYTGHHDEVLQISWSPDSKYFLTTSRDMTARIYSTNPTPG--FTPVTLSGHRSEVIGAYFSNNME------------------------------------------------NIYTVSKDGSLFHWRHTTFVDSRGLDSDEEMELGENFIDHVRWRVQKKHYFNQGHGTKVKSCEFYANSN---------------LIIAGFTNGIFGLYEVPSFTTIHTLSISQKKINAVAINPSGEWLAFGCANMGQLLVWEWQSETYVLKQQGHVYDMNALTYSPDGQTMATGGDDGKVKVWNATSGFCFVTFSDHNSSVKAVEFAKQGQVLFSASLDGTVRAFDLVRYRNFRTFTSPNPVQFTSLAVDPSGDIVCAGTMDTFEI 452          
BLAST of EWM22550.1 vs. NCBI_GenBank
Match: gi|1032653995|gb|OAQ35264.1| (WD40 repeat-like protein [Mortierella elongata AG-77])

HSP 1 Score: 440.654 bits (1132), Expect = 8.821e-143
Identity = 231/519 (44.51%), Postives = 309/519 (59.54%), Query Frame = 0
Query:    1 MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAW---VIDPSTQT-----------------WKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEV 499
            M+  ++ S L G V+  GN+VF+PDGN++ SPV NR+ VFDL+ + +   PYE+   I R+A+SPN   L++VD  G   L + +R I+L     K  +KV DL FSPDG++FAVT  +Q Q+W+TPG  REF P VLHR +  H DE+  + W+P  +Y LT SKD++ R++S +P+    F P TLSGHRD ++GA+FS                                  K  DT              IY++++DG L+ W   +I+P  Q                  W    RH F +   A VV   YHA S               A++VVGFS+GVFG+++LP+   +HTLS+S  +I +V +N +GEWLA G + LGQLLVWEWQSE+YVLKQQGH   +N ++YS DGQ + TGG+D KVK+W+T SGF FVTF+ H + VTA  F  +GQ V SASLDGTVRA DL+RYRNFRT T+P P Q  +LAVDPSGEVVCAG+   FE+
Sbjct:    1 MKSDFKFSNLCGTVYKQGNLVFTPDGNSILSPVGNRLTVFDLVNNKAVTFPYENRKNIDRIALSPNATLLISVDEDGRALLVNYNRQIVLHHFNFK--SKVYDLQFSPDGKYFAVTHGKQVQLWKTPGFHREFTPIVLHRVYTGHYDEVTCITWSPDSKYFLTTSKDMSARVYSTNPIEG--FVPFTLSGHRDTVIGAWFS----------------------------------KEQDT--------------IYTVSKDGALFEWRHQLINPKAQDSDSEDESAMEVDDGPRRWSAVQRHFFYQDH-AKVVCAAYHAAS---------------AMMVVGFSNGVFGIWELPSFNNIHTLSISQKKIDSVTINKSGEWLAFGASKLGQLLVWEWQSESYVLKQQGHFYDMNCLSYSSDGQSVVTGGDDGKVKVWNTVSGFCFVTFSEHTSRVTATEFAKNGQVVFSASLDGTVRAFDLVRYRNFRTFTSPTPVQFSTLAVDPSGEVVCAGAQNTFEI 451          
BLAST of EWM22550.1 vs. NCBI_GenBank
Match: gi|1149602866|gb|OON09995.1| (hypothetical protein BSLG_01091 [Batrachochytrium salamandrivorans])

HSP 1 Score: 438.343 bits (1126), Expect = 3.116e-141
Identity = 233/514 (45.33%), Postives = 306/514 (59.53%), Query Frame = 0
Query:    1 MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPV---EARDPPLLS------------DGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWVIDPSTQTWKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEV 499
            M+  Y+ S L G V+  GNVVF+PDGN+L SPV NRV VFDL+ + S  +P+E+   I R+A+SPN   L+TVD  G   L +  R I+L     K P  V DL FSPDG+F AVT ++Q  +W+ PG   EFAPFV+HR    H D++ SL+W+   ++L++ SKD+T RI S++ +    F    L+GH D +VGA+FS +        RD  L              +  A    +           +G +TV    +S+    +RI                  + WK  +RH F ++  A VVS  +HA               G+ LL VGF  G+FG+++LP  A +HTLS+S  +I TVA+N +GEWLA G A LGQLLVWEWQSE+YVLKQQGH   +N + YSPDGQ +ATGG+D KVKLW+T +GF FVTFT H   + AL F   G  V SAS+DGTVRA DL+RYRNFRT T+P P Q  SLAVDPSGE+VCAGSS+ FE+
Sbjct:    1 MKLDYKFSNLCGTVYKTGNVVFTPDGNSLVSPVGNRVSVFDLVNNKSYTMPFENRKDIARIALSPNAALLITVDGDGRALLINFQRQIVLHHHNFKAP--VYDLSFSPDGRFIAVTHEKQVHIWKAPGFTLEFAPFVMHRVITGHYDQVTSLSWSSDSRFLISSSKDMTSRIHSMNLVDN--FPGVVLTGHNDAVVGAWFSKNNKTIFTVGRDGALFEWTRHAGSWALGGENEAQEDENPDADGNGDKEDEGRNTVSKKHKSNSGKGVRI------------------KHWKSSNRHYFNQNH-AKVVSAVFHA---------------GSGLLSVGFDSGIFGIWELPDFANIHTLSISQKKINTVAVNASGEWLAFGSAKLGQLLVWEWQSESYVLKQQGHQHDMNCLGYSPDGQFIATGGDDGKVKLWNTQTGFCFVTFTEHSGGIVALDFAKRGHIVFSASMDGTVRAFDLVRYRNFRTFTSPTPVQFSSLAVDPSGEIVCAGSSDSFEI 476          
BLAST of EWM22550.1 vs. NCBI_GenBank
Match: gi|1183489156|gb|ORZ12858.1| (putative WD repeat protein [Absidia repens])

HSP 1 Score: 436.802 bits (1122), Expect = 3.915e-141
Identity = 224/519 (43.16%), Postives = 307/519 (59.15%), Query Frame = 0
Query:    1 MRFGYRPSRLLGAVHSGGNVVFSPDGNTLYSPVTNRVVVFDLIRHVSTMLPYEHAYPIRRVAVSPNGRFLLTVDTGGYLFLGHVSRGIILCRMRLKRPNKVRDLVFSPDGQFFAVTQDRQFQVWRTPGAAREFAPFVLHRTFGSHGDEILSLAWAPCGQYLLTGSKDLTVRIWSLHPLPPAVFTPATLSGHRDRIVGAFFSASGPVEARDPPLLSDGGAGSPPSLPPSLPPPSTPKGPDTVWTSPRSSPLSSLRIYSIARDGFLYAWV---------IDPSTQT-----------WKCHDRHAFQKSRRAHVVSVCYHAISSPLPAAAATAPSPGTALLVVGFSDGVFGLYDLPTGAVVHTLSVSSGQIGTVALNLTGEWLALGCAPLGQLLVWEWQSETYVLKQQGHAQAVNAVAYSPDGQVMATGGEDAKVKLWSTASGFSFVTFTAHDAPVTALAFLGSGQAVLSASLDGTVRAHDLLRYRNFRTLTTPAPTQLLSLAVDPSGEVVCAGSSEPFEV 499
            M+  ++ S L G V+S GN++F+PDGN++ SPV NRV VFDL+ + S  LP+E    I  +A+SP    L+TVD  G  FL +  R  +L ++  K   KV  + FSP+G++ A+T   Q QVW+TPG  REF+PFVLHRT+  H D++L ++W+   +Y LT S+D+T R++S +P P   FTP TLSGHR  ++GA+FS                                                     IY++++DG L+ W          +D   +            W+   +H F +     V S  ++A S+               L++ GFS+G+FGLY++P+   +HTLS+S  +I +VA+N +GEWLA GCA LGQLLVWEWQSETYVLKQQGH   +NA+ YSPDGQ MATGG+D KVK+W+  SGF FVTF+ H++ V A+ F   GQ + SASLDGTVRA DL+RYRNFRT T+P P Q  SLAVDPSGE+VCAG+ + FE+
Sbjct:    1 MKSSFKFSNLCGTVYSKGNLIFTPDGNSIISPVGNRVSVFDLVNNKSFTLPFEMRKNIACMALSPQATLLITVDESGRGFLINYPRQTVLHQINFKE--KVNSIKFSPNGKYVALTHGHQTQVWKTPGYTREFSPFVLHRTYTGHHDDVLQISWSSDSKYFLTTSRDMTARLYSTNPTPG--FTPVTLSGHRSEVIGAYFSNDMA------------------------------------------------NIYTVSKDGALFQWRHTTFVDSRGLDSDEEMELGENFIDHVRWRIQKKHYFHQGHGIKVKSCEFYAPSN---------------LIITGFSNGIFGLYEVPSFTTIHTLSISQKKINSVAINPSGEWLAFGCANLGQLLVWEWQSETYVLKQQGHYYDMNALTYSPDGQTMATGGDDGKVKVWNATSGFCFVTFSEHNSSVKAVEFAKQGQVLFSASLDGTVRAFDLVRYRNFRTFTSPNPVQFTSLAVDPSGEIVCAGTMDTFEI 452          
The following BLAST results are available for this feature:
BLAST of EWM22550.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103091|gb|EWM22550.1|0.000e+0100.00small nucleolar ribonucleoprotein complex subunit,... [more]
gi|553177097|ref|XP_005852434.1|0.000e+0100.00periodic tryptophan protein 2, partial [Nannochlor... [more]
gi|1183316929|gb|ORX46795.1|4.031e-14844.59WD40 repeat-like protein [Hesseltinella vesiculosa... [more]
gi|673033660|ref|XP_008870791.1|5.663e-14446.12hypothetical protein H310_07223 [Aphanomyces invad... [more]
gi|1027021822|ref|XP_016604859.1|1.042e-14345.08hypothetical protein SPPG_08020 [Spizellomyces pun... [more]
gi|1183505562|gb|ORZ29110.1|7.623e-14345.69WD40 repeat-like protein [Lobosporangium transvers... [more]
gi|1021056659|emb|SAM07530.1|8.133e-14342.97hypothetical protein [Absidia glauca][more]
gi|1032653995|gb|OAQ35264.1|8.821e-14344.51WD40 repeat-like protein [Mortierella elongata AG-... [more]
gi|1149602866|gb|OON09995.1|3.116e-14145.33hypothetical protein BSLG_01091 [Batrachochytrium ... [more]
gi|1183489156|gb|ORZ12858.1|3.915e-14143.16putative WD repeat protein [Absidia repens][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8146rna8146Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications