EWM22552.1, cds8119 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22552.1 vs. NCBI_GenBank
Match: gi|585103095|gb|EWM22552.1| (Armadillo-like helical [Nannochloropsis gaditana]) HSP 1 Score: 1345.87 bits (3482), Expect = 0.000e+0 Identity = 688/688 (100.00%), Postives = 688/688 (100.00%), Query Frame = 0
Query: 1 MHENLLLFLHSSEVAPRSSSFLVIKLHRRPRKSNAYSYHPYHALRGRVLTWSNYLSFKPNSRTFLYGLMHSLWHSGGRSPMSSAGKSTGAGDSNQGPSPPPQKDRDPSIPPRKHALERPVVDAAPIPRTASSPHRVSAAGSCTSTPPSGSPRPPRRTPQESTFLTKPTASSLQKRRSIVLTHTLSPGGTSAFKTSSTLPPSPPTLGGHGPRVPIPGPSPHEVTPSVSITSTVLPSPTPHALKGSTKTASPTAMPAVTNTPVRGHQLPPLPSSSPGALPSLASPSRSILSAPISARRAYHRKIDQHLPAGTDSPSTSSSLGTSPNTSVAPGRRKPGPPRPHATPSSSSLSSSSSTATTKLVVMSAAEKAMDGAPQGRVYQVQVRNTEDLPPSLHPALDLDLVLETVKEGDAALHGGQRGEEERGHADWAREYECIDAIRRLALHPSLGPALLRPHLPLLLPFLLRSVHNLRSSMQRNALLCLRELFVPAGLGPAFPPFLEPMCALLLRQLGHGDKKFIRVACEGVLAAAVGAEGGATVPFLLPALLPMVKAKKAEEAAGSLLWIEQGLKEVLKEGGADGGREGGRAEGGEESTLTRALGALSLTSPTPPRPSTPPSSPLPPALPSLLPPPRGERTDAARPPPRVGPRLRQLSFGDRQESGEEGADSPEQVLGQGGGRAGGREKGGKFRV 688
MHENLLLFLHSSEVAPRSSSFLVIKLHRRPRKSNAYSYHPYHALRGRVLTWSNYLSFKPNSRTFLYGLMHSLWHSGGRSPMSSAGKSTGAGDSNQGPSPPPQKDRDPSIPPRKHALERPVVDAAPIPRTASSPHRVSAAGSCTSTPPSGSPRPPRRTPQESTFLTKPTASSLQKRRSIVLTHTLSPGGTSAFKTSSTLPPSPPTLGGHGPRVPIPGPSPHEVTPSVSITSTVLPSPTPHALKGSTKTASPTAMPAVTNTPVRGHQLPPLPSSSPGALPSLASPSRSILSAPISARRAYHRKIDQHLPAGTDSPSTSSSLGTSPNTSVAPGRRKPGPPRPHATPSSSSLSSSSSTATTKLVVMSAAEKAMDGAPQGRVYQVQVRNTEDLPPSLHPALDLDLVLETVKEGDAALHGGQRGEEERGHADWAREYECIDAIRRLALHPSLGPALLRPHLPLLLPFLLRSVHNLRSSMQRNALLCLRELFVPAGLGPAFPPFLEPMCALLLRQLGHGDKKFIRVACEGVLAAAVGAEGGATVPFLLPALLPMVKAKKAEEAAGSLLWIEQGLKEVLKEGGADGGREGGRAEGGEESTLTRALGALSLTSPTPPRPSTPPSSPLPPALPSLLPPPRGERTDAARPPPRVGPRLRQLSFGDRQESGEEGADSPEQVLGQGGGRAGGREKGGKFRV
Sbjct: 1 MHENLLLFLHSSEVAPRSSSFLVIKLHRRPRKSNAYSYHPYHALRGRVLTWSNYLSFKPNSRTFLYGLMHSLWHSGGRSPMSSAGKSTGAGDSNQGPSPPPQKDRDPSIPPRKHALERPVVDAAPIPRTASSPHRVSAAGSCTSTPPSGSPRPPRRTPQESTFLTKPTASSLQKRRSIVLTHTLSPGGTSAFKTSSTLPPSPPTLGGHGPRVPIPGPSPHEVTPSVSITSTVLPSPTPHALKGSTKTASPTAMPAVTNTPVRGHQLPPLPSSSPGALPSLASPSRSILSAPISARRAYHRKIDQHLPAGTDSPSTSSSLGTSPNTSVAPGRRKPGPPRPHATPSSSSLSSSSSTATTKLVVMSAAEKAMDGAPQGRVYQVQVRNTEDLPPSLHPALDLDLVLETVKEGDAALHGGQRGEEERGHADWAREYECIDAIRRLALHPSLGPALLRPHLPLLLPFLLRSVHNLRSSMQRNALLCLRELFVPAGLGPAFPPFLEPMCALLLRQLGHGDKKFIRVACEGVLAAAVGAEGGATVPFLLPALLPMVKAKKAEEAAGSLLWIEQGLKEVLKEGGADGGREGGRAEGGEESTLTRALGALSLTSPTPPRPSTPPSSPLPPALPSLLPPPRGERTDAARPPPRVGPRLRQLSFGDRQESGEEGADSPEQVLGQGGGRAGGREKGGKFRV 688
BLAST of EWM22552.1 vs. NCBI_GenBank
Match: gi|298709264|emb|CBJ31203.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 79.7221 bits (195), Expect = 8.534e-12 Identity = 75/227 (33.04%), Postives = 103/227 (45.37%), Query Frame = 0
Query: 362 MSAAEKAMDGAPQGRVYQVQVRNTEDLPPSLHPALDLDLVLETVKEGDAALHGGQRGEEERGHADWAREYECIDAIRRLALHPSLGPALLRP-------------------HLPLLLPFLLRSVHNLRSSMQRNALLCLREL--FVPAGLGPAFPPFLEPMCALLLRQLGHGDKKFIRVACEGVLAAAVGAEGGATVPFLLPALLPMVKAKKAEEAAGSLLWIEQGL 567
+S E AM GAPQG VYQV V T D PS +P D ++ V+ A G DWA Y +D+ RRL + + LL P +L ++ L +V NLRSSM RNALL + ++ F+ +G + PM A L++L GDK+FI C+ A A +L A+LP + + AE AA S + EQ L
Sbjct: 419 LSEEETAMAGAPQGPVYQVAVLETGDFEPSPNP----DEEMQAVRAASA------------GDGDWADLYSAVDSARRLCIFHA--QKLLVPGGQGGGGAGGSGDGGDADGNLEGVVGLLAAAVGNLRSSMVRNALLGVGDIFRFLKHDVGRV---DISPMIAGTLQRLA-GDKRFI---CQTAAQAMEAAARNGPGADVLHAILPSLDDRNAEVAAKSAFYAEQCL 620 The following BLAST results are available for this feature:
BLAST of EWM22552.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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