EWM22556.1, cds8117 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22556.1 vs. NCBI_GenBank
Match: gi|585103101|gb|EWM22556.1| (Protein of unknown function DUF599 [Nannochloropsis gaditana]) HSP 1 Score: 825.083 bits (2130), Expect = 0.000e+0 Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0
Query: 1 MTDPSVNNRGQTPPPLSFALHSPHRPNNGASHHQTSARHDDIFHHITGQELPAPSSSTLRLNKPLVRRKHREILVFIFPIVFALIPVVFIIFSSPHAGSRISFDLTTHVPPIICFIVIPMYHIYMFAYRGKGKASLPFFGNIRVHWVLENCNTGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQIFNRCPNQSLSGCGPDNLYLVAQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPLRPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTVLYLGFAYYVESTNAFLHAANHVIGETEGASVFNNDGAPEGLKEGGKEGGKEGGREGGKEGGKEGIPRCTSLAEQLYSDFPPPPPGDYGRVARGAEENDGREGGGGAV 402
MTDPSVNNRGQTPPPLSFALHSPHRPNNGASHHQTSARHDDIFHHITGQELPAPSSSTLRLNKPLVRRKHREILVFIFPIVFALIPVVFIIFSSPHAGSRISFDLTTHVPPIICFIVIPMYHIYMFAYRGKGKASLPFFGNIRVHWVLENCNTGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQIFNRCPNQSLSGCGPDNLYLVAQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPLRPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTVLYLGFAYYVESTNAFLHAANHVIGETEGASVFNNDGAPEGLKEGGKEGGKEGGREGGKEGGKEGIPRCTSLAEQLYSDFPPPPPGDYGRVARGAEENDGREGGGGAV
Sbjct: 1 MTDPSVNNRGQTPPPLSFALHSPHRPNNGASHHQTSARHDDIFHHITGQELPAPSSSTLRLNKPLVRRKHREILVFIFPIVFALIPVVFIIFSSPHAGSRISFDLTTHVPPIICFIVIPMYHIYMFAYRGKGKASLPFFGNIRVHWVLENCNTGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQIFNRCPNQSLSGCGPDNLYLVAQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPLRPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTVLYLGFAYYVESTNAFLHAANHVIGETEGASVFNNDGAPEGLKEGGKEGGKEGGREGGKEGGKEGIPRCTSLAEQLYSDFPPPPPGDYGRVARGAEENDGREGGGGAV 402
BLAST of EWM22556.1 vs. NCBI_GenBank
Match: gi|299116659|emb|CBN74804.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 98.2117 bits (243), Expect = 4.199e-20 Identity = 55/197 (27.92%), Postives = 103/197 (52.28%), Query Frame = 0
Query: 105 LTTHVPPIICFIVIPMYHIYMFA--YRGKGKASLPFFGNIRVHWVLENCNTGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQIFNRCPNQSLSGCGPDNLYLVAQ--LVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPLRPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTVLY 297
+T V P +CF V + + ++ + + F ++R WV++N G+ A +NT RD+ + +LF A A L A+ +V +A I+ C + S D L+++ L L++ FFV TR+ ++ F +N +++ G P+ + V + A+ YY +G+R + +IP+F+W+ W L+ +T +Y
Sbjct: 11 ITQVVIPAVCFAVCAAFQGWELWGPHKPELARARALFRDVRAGWVVDNYMKGQ-AAVNTTRDYIRAALFFANTAILLATFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQ---CTRYAVHFSFCINTRKIAGAPMPQSLMVKVFNHAHQYYSLGIRLYFGTIPVFAWIFTSWALLAVTPVY 203
BLAST of EWM22556.1 vs. NCBI_GenBank
Match: gi|299116654|emb|CBN74799.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.4261 bits (215), Expect = 5.762e-16 Identity = 57/199 (28.64%), Postives = 98/199 (49.25%), Query Frame = 0
Query: 104 DLTTHVPPIICFIVIPMYHIYMFAYRGKGKA-SLPFFGNIRVHWVLENCNTGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQIFNRCPNQSLSGCGPDNLYLV---AQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPLRPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTVLYL 298
+L V P ICF V + + F A + F +R WV + G A NT RD+ K ++F+A A A+ V +A I+ C + D L+++ VL+VNFF + TRF ++ F +N +E+ G P+ + +V ++ Y+ +G+R + +IP+F+W+ PW L+ +T +Y+
Sbjct: 9 NLQEVVIPAICFAVCAGFQTWEFLGSHDDPARARTLFKAVRAGWVKDQFMKGT-AACNTTRDYIKSAVFMANTAITLATFAVGYAGSIYTDCSDDDDDCTPEDWLFVIKLGCLSAVLLVNFFV----LTQCTRFAVHFSFCINTREIEGVPMSHAMLVNVFEHSHKYFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYV 202
BLAST of EWM22556.1 vs. NCBI_GenBank
Match: gi|1176021934|gb|OQX27588.1| (hypothetical protein BWK80_04515 [Desulfobacteraceae bacterium IS3]) HSP 1 Score: 70.4774 bits (171), Expect = 2.575e-10 Identity = 58/198 (29.29%), Postives = 98/198 (49.49%), Query Frame = 0
Query: 116 IVIPMYHIYMF--AYRGKGKASLPFFGNIRVHWVLENCN-TGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQIFNRCP----NQSLSGCGPDNLYLVAQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPLR-PEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTVLYLGFAYYVE 305
+++ +YHI++F K S+ +R WV ++ + TLR++ + FLA+ A I+ A+ R P + G L+L+ +L+VLIV FF + ++ R+ + M+NV V PL PEAV + L+R L+Y +G+R Y +IP WL GP ++G TV+ + Y ++
Sbjct: 29 LMLAVYHIHLFFQIRHSPLKTSVGLTNRLRSDWVRTMMQGRMDIVAVQTLRNWTMAASFLASTAIFINVGIMNTAFHT-ERVPEIAHTLNFMGSTCHRLWLI-KLLVLIVELFFAFFNFSLSVRYYNHASLMINVP-VEQDPLNTPEAVVATLNRGALHYMLGMRGYYLAIPFTLWLFGPTWMLGGTVIMIPVLYKLD 223
BLAST of EWM22556.1 vs. NCBI_GenBank
Match: gi|302818381|ref|XP_002990864.1| (hypothetical protein SELMODRAFT_272166 [Selaginella moellendorffii] >gi|300141425|gb|EFJ08137.1| hypothetical protein SELMODRAFT_272166 [Selaginella moellendorffii]) HSP 1 Score: 67.781 bits (164), Expect = 2.289e-9 Identity = 43/168 (25.60%), Postives = 83/168 (49.40%), Query Frame = 0
Query: 144 VHWVLENCNTGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQIFN-RCPNQSLSGC-----GPDNLYLVAQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPLRPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTVLYLGFAYYVE 305
VH ++++ + + + TLR+ S +A+ A L +S + F ++ + P S D++ + + V L+ F F I + + RF + F++N G + P+ VA+VL+R + +Y +G R Y++ PL WL GP +V ++ + F Y ++
Sbjct: 53 VHSIMKDNDKKNILAVQTLRNSIMASTLMASTAILLSSGLAAFLSSSYSVKRPLHGFSSTVTVLGAHDDITIATKFVALLACFLFSFICYMQSVRFTNHVGFLINTPVTGDSKITPDYVAAVLARGSNFYTVGTRGYYFAFPLLLWLFGPIPVVVACLVLVPFLYRLD 220
BLAST of EWM22556.1 vs. NCBI_GenBank
Match: gi|302785111|ref|XP_002974327.1| (hypothetical protein SELMODRAFT_228264 [Selaginella moellendorffii] >gi|300157925|gb|EFJ24549.1| hypothetical protein SELMODRAFT_228264 [Selaginella moellendorffii]) HSP 1 Score: 66.6254 bits (161), Expect = 5.375e-9 Identity = 43/168 (25.60%), Postives = 82/168 (48.81%), Query Frame = 0
Query: 144 VHWVLENCNTGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQIFN-RCPNQSLSGC-----GPDNLYLVAQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPLRPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTVLYLGFAYYVE 305
VH ++++ + + + TLR+ S +A+ A L +S + F ++ + P S D++ + + V L+ F F I + + RF + F++N + P+ VA+VL+R + +Y +G R Y++ PL WL GP +V +L + F Y ++
Sbjct: 53 VHSIMKDNDKKNILAVQTLRNSIMASTLMASTAILLSSGLAAFLSSSYSVKRPLHGFSSTVTVLGAHDDITIATKFVALLACFLFSFICYMQSVRFTNHVGFLINTPVTSDSKITPDYVAAVLARGSNFYTVGTRGYYFAFPLLLWLFGPIPVVVACLLLVPFLYRLD 220
BLAST of EWM22556.1 vs. NCBI_GenBank
Match: gi|1084910240|gb|OGR30691.1| (hypothetical protein A2139_05365 [Desulfobacca sp. RBG_16_60_12]) HSP 1 Score: 65.0846 bits (157), Expect = 1.266e-8 Identity = 54/191 (28.27%), Postives = 103/191 (53.93%), Query Frame = 0
Query: 115 FIVIPMYHIYMF--AYRGKGKASLPFFGNIRVHWVLENC--NTGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAY---QIFNRCPNQSLSGCGPDNLYL-VAQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPLRPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGP-WTLVGMTVL 296
F+++ +YH++ YR ++ ++R HWV E+ ++ + TLR++ + FLA+ L +++ A ++ P SL+ ++ L + +L+VLIV+FFF+ ++ R++ + FM+NV + PE + +L+R ++Y +G+R Y+S+ LF WL GP W L+G V+
Sbjct: 16 FLILGIYHLHWLYLIYRKPMATAVGITNHLRGHWV-ESIMEERRDILAVQTLRNWTMAASFLASTGILICLGLLSVAASPEKMAEITP--SLNAVVQEHRVLWLFKLMVLIVDFFFIFFSFCLSIRYLNHVNFMINVPFNLAHKITPEYITGILNRGMMHYTMGMRGYYFSVLLFLWLFGPIWMLIGTVVM 203
BLAST of EWM22556.1 vs. NCBI_GenBank
Match: gi|739711012|ref|WP_037564866.1| (DUF599 domain-containing protein [Spirochaeta odontotermitis] >gi|699052585|gb|KGM38432.1| hypothetical protein JY97_16285 [Spirochaeta odontotermitis]) HSP 1 Score: 63.929 bits (154), Expect = 2.942e-8 Identity = 54/200 (27.00%), Postives = 99/200 (49.50%), Query Frame = 0
Query: 112 IICFIVIPMYHIYM-FAYRGKGKASLPFFGN-IRVHWVLE-NCNTGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQ--IFNRCPNQ-SLSGCGPDNLYLVAQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPLRPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTVLYLGFAYYVE 305
+I I Y +++ F R K ++ N +R WV + ++ + TLR+ + FLA+ A L + ++ A + +F +L+G D L+++ +L++L V FF + + R+ + FM+N+ E G + VA VL+ L+Y +G+R Y S+PL W+ GP ++ T + LG Y ++
Sbjct: 8 LISLASIIAYQVHLVFMVRRKPLTTMVGITNRVRCKWVQSVMADRHDILAVQTLRNQMMAATFLASTAILISLGLLGAAIRPGLFGEISQALNLTGARADTLWML-KLMILAVLFFSAFFNFTLTIRYYNHTGFMINLAESGEAVASVKGVAEVLNLGALHYTLGMRGYYLSVPLVLWIFGPLCMLAGTAVLLGVLYRLD 206
BLAST of EWM22556.1 vs. NCBI_GenBank
Match: gi|1082828490|gb|OGB42800.1| (hypothetical protein A2461_07920 [Burkholderiales bacterium RIFOXYC2_FULL_59_8]) HSP 1 Score: 63.5438 bits (153), Expect = 4.960e-8 Identity = 52/198 (26.26%), Postives = 93/198 (46.97%), Query Frame = 0
Query: 113 ICFIVIPMYHIYM---------FAYRGKGKASLPFFGNIRVHWVLENCN--TGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQ---IFNRCPNQSLSGCGPDNLYLVAQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGR-PLRPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTV 295
+ +++ +Y++++ F G K + R WVL ++ + TLR+F + +A+ ATL +T + Q I ++ G L+++ +++ L+V+F +MA R + + FM+N E L PEAVA L+RA + IG+R ++++PL WL GP LV T+
Sbjct: 19 LSMMIVALYYLWLGRQVRRDPTFTIHGVNKLA-------RTLWVLHVMRHPAKDVMAVQTLRNFIMGASLMASTATLLIIGTLTLSGQAESISRTWHVLNVGGAHAAELWII-KVICLLVDFIVAFFAFVMAVRLVNHVVFMINTPEPDAHHNLAPEAVARRLNRAGNLFAIGMRAFFFAVPLMFWLFGPAFLVVATI 208
BLAST of EWM22556.1 vs. NCBI_GenBank
Match: gi|302790103|ref|XP_002976819.1| (hypothetical protein SELMODRAFT_105772 [Selaginella moellendorffii] >gi|300155297|gb|EFJ21929.1| hypothetical protein SELMODRAFT_105772 [Selaginella moellendorffii]) HSP 1 Score: 63.5438 bits (153), Expect = 6.443e-8 Identity = 51/212 (24.06%), Postives = 99/212 (46.70%), Query Frame = 0
Query: 113 ICFIVIPMYHIYM-FAYRGKGKASLPFFGNI-RVHWV---LENCNTGELAPLNTLRDFGKVSLFLAANATLAASIIVTFAYQIFN-RCPNQSLSGCGPDNLYLVAQLVVLIVNFFFVIIHMLMATRFIMNCEFMLNVKEVGGRPL-RPEAVASVLSRANLYYGIGLRQTYYSIPLFSWLLGPWTLVGMTVLYLGFAYYVESTNAFLHAANHV 317
+ ++I YHI++ + R ++ NI + WV +++ + + + TLR+ S +A+ A L S + F ++ + P +S D+ + + + L+ F F + + + RF+ N +++NV G PL PE V VL R +Y IG R Y + PL W+ GP ++ ++ + Y+++ + + A V
Sbjct: 9 VAILIIVAYHIFLLYKIRKDPLQTVIGINNIAKRAWVRSIMKDMDKKNILAVQTLRNSIMASTLMASTAILLTSGVAAFLSSNYSVKRPLESAVYGARDDFSIAVKFLSLLACFLFSFLCYMQSIRFVNNVNYLINVPPSYGSPLITPEFVGDVLVRGFAFYSIGTRAFYVAFPLLLWIYGPIPVLLCSIALVPVLYHLDVSGDVVGAVRDV 220 The following BLAST results are available for this feature:
BLAST of EWM22556.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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