EWM22562.1, cds8112 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22562.1 vs. NCBI_GenBank
Match: gi|585103112|gb|EWM22562.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 952.97 bits (2462), Expect = 0.000e+0 Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 0
Query: 1 MAPAGRSFHVRLSIHALAFLLLSARGVFAFLPSYPRPPLVPSPCRTLLDPGRRSFSIRMSAAVDKSPTRPERVWSTLFDPEKAARLGAFSFSVYGDPNTARYYRAHDGTDIGFPSDDVVHRNFQHMLSVRIQRARDLPTATNLVEKVLQRSLDPQPVVTVEVLSTHGSDVAVTPIAESTPGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPLAELCKDGAWEGWIDVMDSEGASQGSVEVALRLLPLEGEGASDKEKVAGGAGREKQEEGKEGGKGKEPTKAVVELDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEIGWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDLDGWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYGEWGGEEGRSCFFWPF 465
MAPAGRSFHVRLSIHALAFLLLSARGVFAFLPSYPRPPLVPSPCRTLLDPGRRSFSIRMSAAVDKSPTRPERVWSTLFDPEKAARLGAFSFSVYGDPNTARYYRAHDGTDIGFPSDDVVHRNFQHMLSVRIQRARDLPTATNLVEKVLQRSLDPQPVVTVEVLSTHGSDVAVTPIAESTPGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPLAELCKDGAWEGWIDVMDSEGASQGSVEVALRLLPLEGEGASDKEKVAGGAGREKQEEGKEGGKGKEPTKAVVELDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEIGWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDLDGWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYGEWGGEEGRSCFFWPF
Sbjct: 1 MAPAGRSFHVRLSIHALAFLLLSARGVFAFLPSYPRPPLVPSPCRTLLDPGRRSFSIRMSAAVDKSPTRPERVWSTLFDPEKAARLGAFSFSVYGDPNTARYYRAHDGTDIGFPSDDVVHRNFQHMLSVRIQRARDLPTATNLVEKVLQRSLDPQPVVTVEVLSTHGSDVAVTPIAESTPGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPLAELCKDGAWEGWIDVMDSEGASQGSVEVALRLLPLEGEGASDKEKVAGGAGREKQEEGKEGGKGKEPTKAVVELDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEIGWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDLDGWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYGEWGGEEGRSCFFWPF 465
BLAST of EWM22562.1 vs. NCBI_GenBank
Match: gi|585103111|gb|EWM22561.1| (Lipase, class 3, partial [Nannochloropsis gaditana]) HSP 1 Score: 919.072 bits (2374), Expect = 0.000e+0 Identity = 450/450 (100.00%), Postives = 450/450 (100.00%), Query Frame = 0
Query: 1 MAPAGRSFHVRLSIHALAFLLLSARGVFAFLPSYPRPPLVPSPCRTLLDPGRRSFSIRMSAAVDKSPTRPERVWSTLFDPEKAARLGAFSFSVYGDPNTARYYRAHDGTDIGFPSDDVVHRNFQHMLSVRIQRARDLPTATNLVEKVLQRSLDPQPVVTVEVLSTHGSDVAVTPIAESTPGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPLAELCKDGAWEGWIDVMDSEGASQGSVEVALRLLPLEGEGASDKEKVAGGAGREKQEEGKEGGKGKEPTKAVVELDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEIGWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDLDGWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYG 450
MAPAGRSFHVRLSIHALAFLLLSARGVFAFLPSYPRPPLVPSPCRTLLDPGRRSFSIRMSAAVDKSPTRPERVWSTLFDPEKAARLGAFSFSVYGDPNTARYYRAHDGTDIGFPSDDVVHRNFQHMLSVRIQRARDLPTATNLVEKVLQRSLDPQPVVTVEVLSTHGSDVAVTPIAESTPGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPLAELCKDGAWEGWIDVMDSEGASQGSVEVALRLLPLEGEGASDKEKVAGGAGREKQEEGKEGGKGKEPTKAVVELDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEIGWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDLDGWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYG
Sbjct: 1 MAPAGRSFHVRLSIHALAFLLLSARGVFAFLPSYPRPPLVPSPCRTLLDPGRRSFSIRMSAAVDKSPTRPERVWSTLFDPEKAARLGAFSFSVYGDPNTARYYRAHDGTDIGFPSDDVVHRNFQHMLSVRIQRARDLPTATNLVEKVLQRSLDPQPVVTVEVLSTHGSDVAVTPIAESTPGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPLAELCKDGAWEGWIDVMDSEGASQGSVEVALRLLPLEGEGASDKEKVAGGAGREKQEEGKEGGKGKEPTKAVVELDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEIGWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDLDGWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYG 450
BLAST of EWM22562.1 vs. NCBI_GenBank
Match: gi|585109793|gb|EWM27527.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 267.314 bits (682), Expect = 2.448e-78 Identity = 176/430 (40.93%), Postives = 241/430 (56.05%), Query Frame = 0
Query: 49 DPGRRSFSIRMSAAVDKS------PTRPERVWSTLFDPEKAARLGAFSFSVYGDPNTARYYRAHDGTDIGFPSDDVVHRNFQHMLSVRIQRARDLPTATN-LVEKVLQRSLDPQPVVTVEVLSTHGSDVAVTPIAESTPGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPLAELCK---------DGAWEGWIDVMDSEGA-----SQGSVEVALRLLPLEGEGASDKEKVAGGAGREKQEEGKEGGKGKEPT----KAVVE-LDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEIGWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDL--DGWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYG 450
D RR + SA +D S P+ S FD KA RL AFSF+ YG P+ +R+ R DGTD+GF SDD+V NF+ +L V I +AR+LP L+EK L S P V V ++ G+D+A+T + P + +LYVED A + V D L D ++G ++PL L + G E W ++D E A S G++E+ L+L+PL+G A DK+ R + E K T K+V+E +DW+ L S++ GG G+G Y A FL+N ETDTQG IW + K KE++I FRGT++ WKDLLTD I Q+ LD +D R VHAGF RAFR+++ V AL F+ DL DGW +DVCGHSLGGALA L+A++L R P ++ GRL +Y +G
Sbjct: 33 DLHRREPCLSFSAFIDDSLKASEHPSDELPPKSYFFDAPKAVRLAAFSFAAYGKPSGSRWLRLSDGTDLGFQSDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGS-GCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQR-FFLYVEDPTTASLNLTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDDVPPAQGILE-WSGILDIESAVPNTKSSGTIEIELQLVPLDGN-AVDKDD------RNLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRV-GGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGP--DDRRLVHAGFRRAFRSIRGGVVQALQFIAP-DLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFG 448
BLAST of EWM22562.1 vs. NCBI_GenBank
Match: gi|585113359|gb|EWM30663.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 228.409 bits (581), Expect = 1.851e-64 Identity = 147/399 (36.84%), Postives = 208/399 (52.13%), Query Frame = 0
Query: 77 LFDPEKAARLGAFSFSVYGDPNTARYYRAHDGTDIGFPSDDVVHRNFQHMLSVRIQRARDLPTATNLVEKVLQRSLDPQPVVTVEVLSTHGSDVAVT-PIAEST------PGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPLAEL-CKDGAWEGWIDVMDSEGA-SQGSVEVALRLLPL--EGEGASDKEKVAG---------GAGREKQEEGKEGGKGKEPTKAVVELDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEI-GWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDLD----GWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYG 450
+FD EKA + +F+FSVYG P +Y GT +G P + V RNF L V + RA+DLP + L + +L S+ P +EV S G D T I +S P A SE L VED++ A V++ D LG+D++LGQA +P E+ +W GW+ + +E +G VE+ + LP GEG E A G + EE E + E +LDW+ +A+K+ + + Y +A F +N TDTQG IW + KE+++ FRGTEI +D++TD I+Q PL D D R VH GF AF ++ + Y +L D GW ID GHSLGGALA+L+AH++A YPE+ + RL MY +G
Sbjct: 22 VFDVEKAVKTASFAFSVYGAPKINTWYNVQGGTRLGLPQE-TVRRNFAARLRVTVLRAKDLPKESKLADYILSGSM-PDAYALLEVKSKWGYDQGRTITIPDSNAPEWTDPATATSE----LLVEDLSTATLEVSLRDENRLGKDSVLGQASIPPPEIPAMHSSWTGWLPLKQAENKLGKGKVELRVETLPAVRAGEGIELSESSANLGTSIPWTNDNGLDSDEEDAEAPRSTE-----ADLDWNAMAAKLTNASLS-LRKYRMAVFFTNESTDTQGGIWWRKSTKEVILVFRGTEITSLQDVMTDLNIVQTPLGDG---DKRLVHTGFWTAFNSIVDGAYHSLEMAVGKGEDWAKGGWTIDCSGHSLGGALASLMAHNIAHNYPELCRNNRLHMYSFG 405
BLAST of EWM22562.1 vs. NCBI_GenBank
Match: gi|553193009|ref|XP_005855691.1| (hypothetical protein NGA_2011810, partial [Nannochloropsis gaditana CCMP526] >gi|422293367|gb|EKU20667.1| hypothetical protein NGA_2011810, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 223.016 bits (567), Expect = 1.703e-62 Identity = 146/357 (40.90%), Postives = 203/357 (56.86%), Query Frame = 0
Query: 115 SDDVVHRNFQHMLSVRIQRARDLPTATN-LVEKVLQRSLDPQPVVTVEVLSTHGSDVAVTPIAESTPGPAASETPVYLYVEDVANACFRVAVHDLKSLGEDALLGQAEMPL---AELCKDGA--------WEGWIDVMD--SEGASQGSVEVALRLLPLEGEGASDKEKVAGGAGREKQEEGKEGGKGKEPT----KAVVE-LDWDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTEIGWKDLLTDAMILQQPLDDTRREDPRRVHAGFLRAFRAVKNAVYTALHFVRHGDL--DGWKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYG 450
SDD+V NF+ +L V I +AR+LP L+EK L S P V V ++ G+D+A+T + P + +LYVED A ++ V D L D ++G ++PL E D A W G +D+ S S G++E+ L+L+PL+G A DK+ R + E K T K+V+E +DW+ L S++ GG G+G Y A FL+N ETDTQG IW + K KE++I FRGT++ WKDLLTD I Q+ LD +D R VHAGF RAFR+++ V AL F+ DL DGW +DVCGHSLGGALA L+A++L R P ++ GRL +Y +G
Sbjct: 2 SDDLVRNNFKSLLLVHILQARNLPEEQGGLLEKALSGS-GCDPYVVSAVNNSWGADLAITSAKTANSNPDFFQR-FFLYVEDPTTASLKLTVKDRNLLKGDDVIGSCQVPLRLLEEKIGDDAPPAQGILEWSGILDIESAVSNTKSSGTIEIELQLVPLDGN-AVDKDD------RNLDDPDIENMKSITLTPTGPKSVLEGIDWNELGSRV-GGVATGLGRYQFACFLTNEETDTQGGIWYDWKAKEIIISFRGTQMEWKDLLTDMAIYQEGLDGP--DDRRLVHAGFRRAFRSIRGGVVQALQFIAP-DLIVDGWTVDVCGHSLGGALACLMAYELDRRMPALSEGGRLHVYSFG 345
BLAST of EWM22562.1 vs. NCBI_GenBank
Match: gi|901815019|gb|KMZ69372.1| (putative class 3 lipase [Zostera marina]) HSP 1 Score: 101.679 bits (252), Expect = 3.059e-19 Identity = 74/197 (37.56%), Postives = 110/197 (55.84%), Query Frame = 0
Query: 270 VAGGAGREKQEEGKEGGKGKEPTKAVVELDWDVLASKIRGGEVGGMGA-YALAAFLSNPETDTQGAIWENQKDKELVICFRGTE-IGWKDLLTDAMILQQPLDDTR--RE--DPRRVHAGFLRAFRAVK----NAVYTALHFVRHGD----LDGWKIDVCGHSLGGALATLLAHDLAERYPEMAASG--RLQMYCYG 450
++ + REK +E E K T W +LAS + G+ + + + FL++ TDTQ AIW + K L++ FRGTE + WKDLLTD M++ L+ R RE + +VH GFL A+ +V+ N + ++ F R GD + W+I + GHSLGGALATLLA++++ MA SG + MY +G
Sbjct: 495 ISEKSEREKMKE--EDVKSLFSTAESAMEAWTMLASSL--GQTSFIKSDFVKICFLNHESTDTQVAIWRDSARKRLIVSFRGTEQVKWKDLLTDLMLIPSGLNPERLGREKFEEIQVHTGFLTAYDSVRTRIMNLIMQSIEF-RDGDNFDTIQKWQIYLTGHSLGGALATLLAYEISS--SRMAKSGAISITMYNFG 684
BLAST of EWM22562.1 vs. NCBI_GenBank
Match: gi|971519765|dbj|GAQ78458.1| (hypothetical protein KFL_000130400 [Klebsormidium nitens]) HSP 1 Score: 101.293 bits (251), Expect = 3.753e-19 Identity = 64/165 (38.79%), Postives = 84/165 (50.91%), Query Frame = 0
Query: 300 WDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTE-IGWKDLLTDAMILQQPLDDTRRE--DPRR--VHAGFLRAFRAVKNAVYTALHFVRHGDLDG---------WKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYG 450
W +LA + G + AFL +PETDTQ AIW + LV+ FRGTE W+DL TD M++ L+ R DP VHAGFLRA+ +V+ + L + DL+ W I + GHSLGGALATLLA D+ + MY +G
Sbjct: 518 WSLLAQQA-GQRSAVQSDFTKLAFLDHPETDTQAAIWRANAGRRLVVAFRGTEQTQWRDLATDLMLVSAGLNPERVSAGDPNEPAVHAGFLRAYDSVRRRIVAILEAMTRDDLESQAPDESTGTWTIYITGHSLGGALATLLARDVVRLPWARQRQAEVVMYNFG 681
BLAST of EWM22562.1 vs. NCBI_GenBank
Match: gi|1026755848|gb|OAE18387.1| (hypothetical protein AXG93_1783s1160 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 99.3673 bits (246), Expect = 1.986e-18 Identity = 68/167 (40.72%), Postives = 89/167 (53.29%), Query Frame = 0
Query: 300 WDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTE-IGWKDLLTDAMILQQPLDDTRRE----DPRRVHAGFLRAFRAVKNAVYTALHFVRHGDLDG---------WKIDVCGHSLGGALATLLAHDLAERYPEMAASGRL--QMYCYG 450
W +LA+ + GG + F+ N +TDTQ AIW +Q+ K LV+ FRGTE WKD+LTD ++ + R E D VH GFL A+ +VK + + +H DG W I V GHSLGGALATL A DLA + +A GR+ MY YG
Sbjct: 574 WALLATTM-GGVSLLKSDFKKICFVENAKTDTQVAIWRDQRRKRLVVAFRGTEQTKWKDVLTDLSLIATGFNPERVEGGSKDEILVHGGFLSAYDSVKARLLSLVHSSIEISEDGSESDDSEGAWHIYVTGHSLGGALATLFALDLASCH--LAKEGRILVTMYNYG 737
BLAST of EWM22562.1 vs. NCBI_GenBank
Match: gi|1004137654|gb|KXZ45677.1| (hypothetical protein GPECTOR_52g74 [Gonium pectorale]) HSP 1 Score: 94.7449 bits (234), Expect = 4.082e-17 Identity = 61/152 (40.13%), Postives = 82/152 (53.95%), Query Frame = 0
Query: 322 AFLSNPETDTQGAIWENQKDKELVICFRGTE-IGWKDLLTDAMILQQPLDDTRREDPR--------------------RVHAGFLRAFRAVKNAVYTALHFVR-HGDLDG-WKIDVCGHSLGGALATLLAHDLAERYPEMAASGRLQMYCYG 450
AF+ N ETDTQ ++ N + +E VI FRGTE + WKD+ TD + L+ R +D VH GFL A+ +VK AV+T L V G+ G W++ V GHSLGGALATL A++LAER ++ +Y YG
Sbjct: 303 AFVENEETDTQVWVYRNVEAREAVIAFRGTEQVKWKDIATDLNLTPASLNPERLDDNAGLPFTARIFKAVSGANQNQLMVHKGFLDAYDSVKRAVFTLLDAVTGSGERGGPWRVLVTGHSLGGALATLAAYELAERRCPARTVQQISLYTYG 454
BLAST of EWM22562.1 vs. NCBI_GenBank
Match: gi|357164616|ref|XP_003580112.1| (PREDICTED: uncharacterized protein LOC100834372 [Brachypodium distachyon] >gi|944047860|gb|KQJ83501.1| hypothetical protein BRADI_5g15300 [Brachypodium distachyon] >gi|944047861|gb|KQJ83502.1| hypothetical protein BRADI_5g15300 [Brachypodium distachyon] >gi|944047862|gb|KQJ83503.1| hypothetical protein BRADI_5g15300 [Brachypodium distachyon]) HSP 1 Score: 94.7449 bits (234), Expect = 5.642e-17 Identity = 63/165 (38.18%), Postives = 92/165 (55.76%), Query Frame = 0
Query: 300 WDVLASKIRGGEVGGMGAYALAAFLSNPETDTQGAIWENQKDKELVICFRGTE-IGWKDLLTDAMILQQPLDDTRR----EDPRRVHAGFLRAFRAVKNAVYTALHF-VRHGDLDG------WKIDVCGHSLGGALATLLAHDLAERYPEMAASGRL--QMYCYG 450
W +LA+ + G + FL N TDTQ AIW + + LV+ FRGTE WKDL+TD M++ L+ R ++ +VH+GFL A+ +V+N + + + + D +G W I V GHSLGGALATLLA +L+ +MA +G + MY +G
Sbjct: 574 WAMLATSM-GRSSFIQSDFEKICFLDNVSTDTQVAIWRDSSRRRLVVAFRGTEQTRWKDLITDLMLVPAGLNPERLGGDFKEEVQVHSGFLSAYDSVRNRIMVLTKYAIGYTDEEGAETTPKWHIYVTGHSLGGALATLLAIELSS--SQMAKNGIIFVTMYNFG 735 The following BLAST results are available for this feature:
BLAST of EWM22562.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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