EWM22564.1, cds8110 (CDS) Nannochloropsis gaditana

Overview
NameEWM22564.1
Unique Namecds8110
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:647674..648001 +
Alignment locationKK037247.1:648460..648653 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22564.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100529g4.9582.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:647674..648001 +
KK037247.1supercontigKK037247.1:648460..648653 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM22564.1 vs. NCBI_GenBank
Match: gi|585103114|gb|EWM22564.1| (hypothetical protein Naga_100529g4 [Nannochloropsis gaditana])

HSP 1 Score: 357.451 bits (916), Expect = 6.215e-125
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0 
Query:    1 MVVGVRWMEFRVFFSTRPLTASAHTTSCCRCRIMSKRLGFLLLLFLSTLGWSEAFHGVHPLPNQARYASPRAKVQSQPLARSPSERTALIRREVVAIIPQVLFVAACAGAVFGYVATHIDEIVAKQKVAVEKTMTKQNADLKSAQQQQKEAIDAAMKKQQAAIKKIQEDQNKR 173
            MVVGVRWMEFRVFFSTRPLTASAHTTSCCRCRIMSKRLGFLLLLFLSTLGWSEAFHGVHPLPNQARYASPRAKVQSQPLARSPSERTALIRREVVAIIPQVLFVAACAGAVFGYVATHIDEIVAKQKVAVEKTMTKQNADLKSAQQQQKEAIDAAMKKQQAAIKKIQEDQNKR
Sbjct:    1 MVVGVRWMEFRVFFSTRPLTASAHTTSCCRCRIMSKRLGFLLLLFLSTLGWSEAFHGVHPLPNQARYASPRAKVQSQPLARSPSERTALIRREVVAIIPQVLFVAACAGAVFGYVATHIDEIVAKQKVAVEKTMTKQNADLKSAQQQQKEAIDAAMKKQQAAIKKIQEDQNKR 173
The following BLAST results are available for this feature:
BLAST of EWM22564.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103114|gb|EWM22564.1|6.215e-125100.00hypothetical protein Naga_100529g4 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8134rna8134Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications