EWM22568.1, cds8105 (CDS) Nannochloropsis gaditana

Overview
NameEWM22568.1
Unique Namecds8105
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:641438..641953 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22568.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102185g1.4766.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:641438..641953 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22568.1 vs. NCBI_GenBank
Match: gi|585103120|gb|EWM22568.1| (hypothetical protein Naga_102185g1 [Nannochloropsis gaditana])

HSP 1 Score: 315.464 bits (807), Expect = 2.118e-108
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 
Query:    1 MLLVSVEDSFSCPLLCWAFPFLSLYRTPSLPLSVLTSRHRRVLLPLRLFLSPPSLPPSSSPPGILNIGRSIENPYAWETFGTRPFLPPSLLPSSSLPPSLPPIPPLSLLSSPRHRFRRLRHPAGPRLEFDRHRLARRPSRLPEGVGAIPPRPRGRAPRLTRPVSSGYHGGG 171
            MLLVSVEDSFSCPLLCWAFPFLSLYRTPSLPLSVLTSRHRRVLLPLRLFLSPPSLPPSSSPPGILNIGRSIENPYAWETFGTRPFLPPSLLPSSSLPPSLPPIPPLSLLSSPRHRFRRLRHPAGPRLEFDRHRLARRPSRLPEGVGAIPPRPRGRAPRLTRPVSSGYHGGG
Sbjct:    1 MLLVSVEDSFSCPLLCWAFPFLSLYRTPSLPLSVLTSRHRRVLLPLRLFLSPPSLPPSSSPPGILNIGRSIENPYAWETFGTRPFLPPSLLPSSSLPPSLPPIPPLSLLSSPRHRFRRLRHPAGPRLEFDRHRLARRPSRLPEGVGAIPPRPRGRAPRLTRPVSSGYHGGG 171
The following BLAST results are available for this feature:
BLAST of EWM22568.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103120|gb|EWM22568.1|2.118e-108100.00hypothetical protein Naga_102185g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8129rna8129Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications