EWM22569.1, cds8102 (CDS) Nannochloropsis gaditana

Overview
NameEWM22569.1
Unique Namecds8102
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:636991..637566 +

Link to JBrowse

Properties
Property NameValue
Start range636991
Start range.
Protein idEWM22569.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100993g3.6880.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:636991..637566 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22569.1 vs. NCBI_GenBank
Match: gi|585103122|gb|EWM22569.1| (hypothetical protein Naga_100993g3, partial [Nannochloropsis gaditana])

HSP 1 Score: 357.836 bits (917), Expect = 1.510e-124
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 
Query:    1 RGGGRERVSMCSPRLASVRPPPERARHLANLPRALSRRRGLRFPQRGLRPPYLLPAPLPFHPPNRTFINPCFPSPSLPPVLHPALPPGPWPSAHASHPRHLNGDLVRLGRGRGGDPPREGDGRGRRGGGGGRGRSASAHARAGAGRTLSLRVERPPTPFPSPGPSPRLEQEGCASLRDEGGASVERDEMSV 191
            RGGGRERVSMCSPRLASVRPPPERARHLANLPRALSRRRGLRFPQRGLRPPYLLPAPLPFHPPNRTFINPCFPSPSLPPVLHPALPPGPWPSAHASHPRHLNGDLVRLGRGRGGDPPREGDGRGRRGGGGGRGRSASAHARAGAGRTLSLRVERPPTPFPSPGPSPRLEQEGCASLRDEGGASVERDEMSV
Sbjct:    1 RGGGRERVSMCSPRLASVRPPPERARHLANLPRALSRRRGLRFPQRGLRPPYLLPAPLPFHPPNRTFINPCFPSPSLPPVLHPALPPGPWPSAHASHPRHLNGDLVRLGRGRGGDPPREGDGRGRRGGGGGRGRSASAHARAGAGRTLSLRVERPPTPFPSPGPSPRLEQEGCASLRDEGGASVERDEMSV 191
The following BLAST results are available for this feature:
BLAST of EWM22569.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103122|gb|EWM22569.1|1.510e-124100.00hypothetical protein Naga_100993g3, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8126rna8126Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications