EWM22578.1, cds8095 (CDS) Nannochloropsis gaditana

Overview
NameEWM22578.1
Unique Namecds8095
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:614501..614733 -
Alignment locationKK037247.1:614033..614380 -
Alignment locationKK037247.1:613817..613832 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22578.1
ProductCWC16 protein
Orig transcript idgnl|cribi|Naga_100401g2.1217.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:614501..614733 -
KK037247.1supercontigKK037247.1:614033..614380 -
KK037247.1supercontigKK037247.1:613817..613832 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR007590CWC16
IPR008584DUF866_euk
Homology
[Close]
BLAST of EWM22578.1 vs. NCBI_GenBank
Match: gi|585103138|gb|EWM22578.1| (CWC16 protein [Nannochloropsis gaditana])

HSP 1 Score: 407.912 bits (1047), Expect = 4.517e-144
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 
Query:    1 MSFPFSPLFQIPFTFPIGKMGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVEIAGAQ 198
            MSFPFSPLFQIPFTFPIGKMGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVEIAGAQ
Sbjct:    1 MSFPFSPLFQIPFTFPIGKMGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVEIAGAQ 198
[Close]
BLAST of EWM22578.1 vs. NCBI_GenBank
Match: gi|567972413|gb|ETK97396.1| (hypothetical protein L915_00049, partial [Phytophthora parasitica] >gi|570338464|gb|ETO86412.1| hypothetical protein F444_00046, partial [Phytophthora parasitica P1976])

HSP 1 Score: 233.802 bits (595), Expect = 6.450e-74
Identity = 110/181 (60.77%), Postives = 138/181 (76.24%), Query Frame = 0 
Query:   13 FTFPIGKMGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVE 193
            FT P   MGERKVLNKYFPPDFDP+L+PR K  K +Q+E RMM+PF+IQC TCGE+MYRGKKFN RKE+V  + Y GI+ +RFY+KC+TCS EITF TDP++ DY  EHG +R FE W+E E  E     +RAEEE+ DAMKALE+RT+DSK EMDILDAL+E K +  +   +  D+L++
Sbjct:    1 FTKPKHVMGERKVLNKYFPPDFDPSLIPRRKKPKNEQVEVRMMLPFSIQCATCGEYMYRGKKFNSRKEEVLEENYHGIRIYRFYIKCITCSSEITFKTDPKRGDYVAEHGCQRNFEPWRENEDEEAAAIAQRAEEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDKLLQ 181
[Close]
BLAST of EWM22578.1 vs. NCBI_GenBank
Match: gi|568000728|gb|ETL50737.1| (hypothetical protein L916_00048 [Phytophthora parasitica] >gi|568029856|gb|ETM03770.1| hypothetical protein L917_00039 [Phytophthora parasitica] >gi|570962450|gb|ETP27429.1| hypothetical protein F441_00049 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 230.335 bits (586), Expect = 1.039e-72
Identity = 107/174 (61.49%), Postives = 135/174 (77.59%), Query Frame = 0 
Query:   20 MGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVE 193
            MGERKVLNKYFPPDFDP+L+PR K  K +Q+E RMM+PF+IQC TCGE+MYRGKKFN RKE+V  + Y GI+ +RFY+KC+TCS EITF TDP++ DY  EHG +R FE W+E E  E     +RAEEE+ DAMKALE+RT+DSK EMDILDAL+E K +  +   +  D+L++
Sbjct:    1 MGERKVLNKYFPPDFDPSLIPRRKKPKNEQVEVRMMLPFSIQCATCGEYMYRGKKFNSRKEEVLEENYHGIRIYRFYIKCITCSSEITFKTDPKRGDYVAEHGCQRNFEPWRENEDEEAAAIAQRAEEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDKLLQ 174
[Close]
BLAST of EWM22578.1 vs. NCBI_GenBank
Match: gi|570999384|gb|ETP55409.1| (hypothetical protein F442_00043 [Phytophthora parasitica P10297])

HSP 1 Score: 229.95 bits (585), Expect = 1.409e-72
Identity = 107/174 (61.49%), Postives = 135/174 (77.59%), Query Frame = 0 
Query:   20 MGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVE 193
            MGERKVLNKYFPPDFDP+L+PR K  K +Q+E RMM+PF+IQC TCGE+MYRGKKFN RKE+V  + Y GI+ +RFY+KC+TCS EITF TDP++ DY  EHG +R FE W+E E  E     +RAEEE+ DAMKALE+RT+DSK EMDILDAL+E K +  +   +  D+L++
Sbjct:    1 MGERKVLNKYFPPDFDPSLIPRRKKPKNEQVEVRMMLPFSIQCATCGEYMYRGKKFNSRKEEVLEENYHGIRIYRFYIKCITCSSEITFKTDPKRGDYVAEHGCQRNFEPWRENEDEEAAAIAQRAEEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDKLLQ 174
[Close]
BLAST of EWM22578.1 vs. NCBI_GenBank
Match: gi|675161535|ref|XP_008889652.1| (hypothetical protein PPTG_00037 [Phytophthora parasitica INRA-310] >gi|568108830|gb|ETN23437.1| hypothetical protein PPTG_00037 [Phytophthora parasitica INRA-310])

HSP 1 Score: 229.95 bits (585), Expect = 1.409e-72
Identity = 107/174 (61.49%), Postives = 135/174 (77.59%), Query Frame = 0 
Query:   20 MGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVE 193
            MGERKVLNKYFPPDFDP+L+PR K  K +Q+E RMM+PF+IQC TCGE+MYRGKKFN RKE+V  + Y GI+ +RFY+KC+TCS EITF TDP++ DY  EHG +R FE W+E E  E     +RAEEE+ DAMKALE+RT+DSK EMDILDAL+E K +  +   +  D+L++
Sbjct:    1 MGERKVLNKYFPPDFDPSLIPRRKKPKNEQVEVRMMLPFSIQCATCGEYMYRGKKFNSRKEEVLEENYHGIRIYRFYIKCITCSSEITFKTDPKRGDYVAEHGCQRNFEPWRENEDEEAAAIAQRAEEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDKLLQ 174
[Close]
BLAST of EWM22578.1 vs. NCBI_GenBank
Match: gi|953487069|emb|CEG49131.1| (Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 229.95 bits (585), Expect = 1.702e-72
Identity = 109/174 (62.64%), Postives = 135/174 (77.59%), Query Frame = 0 
Query:   20 MGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVE 193
            MGERKVLNKYFPPDFDP LVPR K  K +Q+E RMM+PF+IQC TCGE+MYRGKKFN RKE+V  + Y GI+ +RFY+KC+TCS EITF TDP++ DY  EHG +R FE W+E E  EK    +RAEEE+ DAMKALE+RT+DSK EMDILDAL+E K +  +   +  D+L++
Sbjct:    1 MGERKVLNKYFPPDFDPLLVPRRKRPKNQQVEVRMMLPFSIQCATCGEYMYRGKKFNSRKEEVLEENYHGIRIYRFYIKCITCSSEITFKTDPKRGDYVAEHGCQRNFEPWRENEDEEKAAITQRAEEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDKLLQ 174
[Close]
BLAST of EWM22578.1 vs. NCBI_GenBank
Match: gi|970634151|gb|KUF79506.1| (Coiled-coil domain-containing protein 94 [Phytophthora nicotianae] >gi|970650621|gb|KUF89614.1| hypothetical protein AM588_10006899 [Phytophthora nicotianae])

HSP 1 Score: 229.565 bits (584), Expect = 2.179e-72
Identity = 107/174 (61.49%), Postives = 135/174 (77.59%), Query Frame = 0 
Query:   20 MGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVE 193
            MGERKVLNKYFPPDFDP+L+PR K  K +Q+E RMM+PF+IQC TCGE+MYRGKKFN RKE+V  + Y GI+ +RFY+KC+TCS EITF TDP++ DY  EHG +R FE W+E E  E     +RAEEE+ DAMKALE+RT+DSK EMDILDAL+E K +  +   +  D+L++
Sbjct:    1 MGERKVLNKYFPPDFDPSLIPRRKKPKNEQVEVRMMLPFSIQCATCGEYMYRGKKFNSRKEEVLEENYHGIRIYRFYIKCITCSSEITFKTDPKRGDYVAEHGCQRNFEPWRENEDEEAAAIAQRAEEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDKLLQ 174
[Close]
BLAST of EWM22578.1 vs. NCBI_GenBank
Match: gi|1214692775|gb|OWZ07289.1| (Coiled-coil domain-containing hypothatical protein [Phytophthora megakarya])

HSP 1 Score: 229.565 bits (584), Expect = 2.266e-72
Identity = 106/174 (60.92%), Postives = 136/174 (78.16%), Query Frame = 0 
Query:   20 MGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVE 193
            MGERKVLNKYFPPDFDP+L+PR K  K +Q+E RMM+PF+IQC TCGE+MYRGKKFN RKE+V  + Y GI+ +RFY+KC+TCS EITF TDP++ DY  EHG +R FE W+E E  ++    +RAEEE+ DAMKALE+RT+DSK EMDILDAL+E K +  +   +  D+L++
Sbjct:    1 MGERKVLNKYFPPDFDPSLIPRRKKPKNEQVEVRMMLPFSIQCATCGEYMYRGKKFNSRKEEVLEENYHGIRIYRFYIKCITCSSEITFKTDPKRGDYVAEHGCQRNFEPWRENEDEQEAAVAQRAEEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDKLLQ 174
[Close]
BLAST of EWM22578.1 vs. NCBI_GenBank
Match: gi|695440738|ref|XP_009533036.1| (hypothetical protein PHYSODRAFT_317650 [Phytophthora sojae] >gi|348672883|gb|EGZ12703.1| hypothetical protein PHYSODRAFT_317650 [Phytophthora sojae])

HSP 1 Score: 228.409 bits (581), Expect = 4.218e-72
Identity = 106/174 (60.92%), Postives = 136/174 (78.16%), Query Frame = 0 
Query:   20 MGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVE 193
            MGERKVLNKYFPPDFDP+L+PR K  K +Q+E RMM+PF+IQC TCGE+MYRGKKFN RKE+V  + Y GI+ +RFY+KC+TCS EITF TDP++ DY  EHG +R FE W+E E  ++    +RAEEE+ DAMKALE+RT+DSK EMDILDAL+E K +  +   +  D+L++
Sbjct:    1 MGERKVLNKYFPPDFDPSLIPRRKKPKNEQVEVRMMLPFSIQCATCGEYMYRGKKFNSRKEEVLEENYHGIRIYRFYIKCITCSSEITFKTDPKRGDYVAEHGCQRNFEPWRETEDEQEAAIAQRAEEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDKLLQ 174
[Close]
BLAST of EWM22578.1 vs. NCBI_GenBank
Match: gi|301095066|ref|XP_002896635.1| (coiled-coil domain-containing protein 94 [Phytophthora infestans T30-4] >gi|262108865|gb|EEY66917.1| coiled-coil domain-containing protein 94 [Phytophthora infestans T30-4])

HSP 1 Score: 227.639 bits (579), Expect = 5.829e-72
Identity = 106/174 (60.92%), Postives = 134/174 (77.01%), Query Frame = 0 
Query:   20 MGERKVLNKYFPPDFDPNLVPRTKFDKFKQIETRMMIPFNIQCDTCGEFMYRGKKFNMRKEDVQGDTYKGIKKFRFYMKCMTCSREITFITDPEKMDYAMEHGAKRLFEVWKEQEKAEKEEGERRAEEEQQDAMKALEHRTIDSKLEMDILDALEETKVMGNKRDLIRGDRLVE 193
            MGERKVLNKYFPPDFDP+L+PR K  K +Q+E RMM+PF+IQC TCGE+MYRGKKFN RKE+V  + Y GI+ +RFY+KC+TCS EITF TDP++ DY  EHG +R FE W+E E  E     +R EEE+ DAMKALE+RT+DSK EMDILDAL+E K +  +   +  D+L++
Sbjct:    1 MGERKVLNKYFPPDFDPSLIPRRKKPKNEQVEVRMMLPFSIQCATCGEYMYRGKKFNSRKEEVLEENYHGIRIYRFYIKCITCSSEITFKTDPKRGDYVAEHGCQRNFEPWRENEDEEAAAVAQRVEEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDKLLQ 174
The following BLAST results are available for this feature:
BLAST of EWM22578.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103138|gb|EWM22578.1|4.517e-144100.00CWC16 protein [Nannochloropsis gaditana][more]
gi|567972413|gb|ETK97396.1|6.450e-7460.77hypothetical protein L915_00049, partial [Phytopht... [more]
gi|568000728|gb|ETL50737.1|1.039e-7261.49hypothetical protein L916_00048 [Phytophthora para... [more]
gi|570999384|gb|ETP55409.1|1.409e-7261.49hypothetical protein F442_00043 [Phytophthora para... [more]
gi|675161535|ref|XP_008889652.1|1.409e-7261.49hypothetical protein PPTG_00037 [Phytophthora para... [more]
gi|953487069|emb|CEG49131.1|1.702e-7262.64Uncharacterized conserved protein [Plasmopara hals... [more]
gi|970634151|gb|KUF79506.1|2.179e-7261.49Coiled-coil domain-containing protein 94 [Phytopht... [more]
gi|1214692775|gb|OWZ07289.1|2.266e-7260.92Coiled-coil domain-containing hypothatical protein... [more]
gi|695440738|ref|XP_009533036.1|4.218e-7260.92hypothetical protein PHYSODRAFT_317650 [Phytophtho... [more]
gi|301095066|ref|XP_002896635.1|5.829e-7260.92coiled-coil domain-containing protein 94 [Phytopht... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8119rna8119Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications