EWM22611.1, cds8078 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22611.1 vs. NCBI_GenBank
Match: gi|585103174|gb|EWM22611.1| (peptide methionine sulfoxide reductase [Nannochloropsis gaditana]) HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0 Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0 Query: 1 MRATSILASATVIGVASKGVRAFQYPVSRSLTQLVGAGSYASAVPTLNKNSGPIHLKRDGVRRYLWNSIFNAAGKGDGIDYSTLTGMEAKEAAELALKGVVQDKSKDGYEIATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFSKPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYGREIFFLGKVDVGSVETTYSMNECDCEASEVLARASTRATVKRVPLLWVEPKLENRARPLFLLADLSEFVYVQTDNFTVRKKRKKEFVVNFL 367 MRATSILASATVIGVASKGVRAFQYPVSRSLTQLVGAGSYASAVPTLNKNSGPIHLKRDGVRRYLWNSIFNAAGKGDGIDYSTLTGMEAKEAAELALKGVVQDKSKDGYEIATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFSKPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYGREIFFLGKVDVGSVETTYSMNECDCEASEVLARASTRATVKRVPLLWVEPKLENRARPLFLLADLSEFVYVQTDNFTVRKKRKKEFVVNFL Sbjct: 1 MRATSILASATVIGVASKGVRAFQYPVSRSLTQLVGAGSYASAVPTLNKNSGPIHLKRDGVRRYLWNSIFNAAGKGDGIDYSTLTGMEAKEAAELALKGVVQDKSKDGYEIATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFSKPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYGREIFFLGKVDVGSVETTYSMNECDCEASEVLARASTRATVKRVPLLWVEPKLENRARPLFLLADLSEFVYVQTDNFTVRKKRKKEFVVNFL 367
BLAST of EWM22611.1 vs. NCBI_GenBank
Match: gi|57335901|emb|CAH25352.1| (putative methionine sulfoxide reductase, partial [Guillardia theta]) HSP 1 Score: 243.047 bits (619), Expect = 5.585e-76 Identity = 124/220 (56.36%), Postives = 162/220 (73.64%), Query Frame = 0 Query: 59 DGVRRYLWNSIFNAAGKGDGIDYSTL-TGMEAKEAAELALKGVVQDKSKDGYEIATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFS-KPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYG 276 G R L S+F +GK +YS L G A EAAE A +G V+ SK G+ IATF GGCFWG+EL YQRV GV+ T+VGY QG+ E P+Y+ VC+G +GHTE VQ+ ++PKEVS++ LC++L +INP+LK+QVGNDRG+QYRHGIY+H Q+ A++ ++E +A+ + P TE A V++PAEEYHQ+YLEKGGRF + QSAAKGC DPIRCYG Sbjct: 4 QGTRMGLLGSLFGGSGK---REYSDLKAGTWAAEAAEYAKEGQVKSVSKAGHSIATFGGGCFWGIELVYQRVPGVVATAVGYAQGELEHPSYEMVCTGATGHTEVVQLTYNPKEVSFKQLCQVLFGKINPSLKDQVGNDRGSQYRHGIYFHTPEQKAEAEEAIQEVKAKLNGAPFYTELEAAKVFYPAEEYHQQYLEKGGRFGSKQSAAKGCNDPIRCYG 220
BLAST of EWM22611.1 vs. NCBI_GenBank
Match: gi|551676385|ref|XP_005840946.1| (hypothetical protein GUITHDRAFT_100216 [Guillardia theta CCMP2712] >gi|428185113|gb|EKX53966.1| hypothetical protein GUITHDRAFT_100216 [Guillardia theta CCMP2712]) HSP 1 Score: 239.965 bits (611), Expect = 5.677e-75 Identity = 122/214 (57.01%), Postives = 160/214 (74.77%), Query Frame = 0 Query: 65 LWNSIFNAAGKGDGIDYSTL-TGMEAKEAAELALKGVVQDKSKDGYEIATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFS-KPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYG 276 L S+F +GK +YS L G A EAAE A +G V+ SK G+ IATF GGCFWG+EL YQRV GV+ T+VGY QG+ E P+Y+ VC+G +GHTE VQ+ ++PKEVS++ LC++L +INP+LK+QVGNDRG+QYRHGIY+H Q+ A++ ++E +A+ + P TE A V++PAEEYHQ+YLEKGGRF + QSAAKGC DPIRCYG Sbjct: 3 LLGSLFGGSGK---REYSDLKAGTWAAEAAEYAKEGQVKSVSKAGHSIATFGGGCFWGIELVYQRVPGVVATAVGYAQGELEHPSYEMVCTGATGHTEVVQLTYNPKEVSFKQLCQVLFGKINPSLKDQVGNDRGSQYRHGIYFHTPEQKAEAEEAIQEVKAKLNGAPFYTELEAAKVFYPAEEYHQQYLEKGGRFGSKQSAAKGCNDPIRCYG 213
BLAST of EWM22611.1 vs. NCBI_GenBank
Match: gi|553192018|ref|XP_005855498.1| (peptide methionine sulfoxide reductase [Nannochloropsis gaditana CCMP526] >gi|553195423|ref|XP_005856143.1| peptide methionine sulfoxide reductase [Nannochloropsis gaditana CCMP526] >gi|422292910|gb|EKU20211.1| peptide methionine sulfoxide reductase [Nannochloropsis gaditana CCMP526] >gi|422293556|gb|EKU20856.1| peptide methionine sulfoxide reductase [Nannochloropsis gaditana CCMP526] >gi|585110204|gb|EWM27874.1| peptide methionine sulfoxide reductase [Nannochloropsis gaditana]) HSP 1 Score: 237.269 bits (604), Expect = 4.729e-74 Identity = 115/196 (58.67%), Postives = 140/196 (71.43%), Query Frame = 0 Query: 81 YSTLTGMEAKEAAELALKGVVQDKSKDGYEIATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFSKPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYG 276 Y L+G+ A EA++ AL V S DG+ IATFAGGCFWG+ELA+QRV GV+ T GYTQG +P+Y VCSG +GHTEA+QV F P EVSYE L K+ RI+P ++N G DRGTQYR GIY H + Q + A + E Q ++S+PI+TE PA V+WPAE HQ YL KGGRF + QSAAKGCTDPIRCYG Sbjct: 6 YQQLSGL-ALEASKAALADSVPALSVDGHSIATFAGGCFWGIELAFQRVPGVVATGTGYTQGHVAEPSYQEVCSGTTGHTEAIQVHFKPNEVSYEDLLKVFWERIDPLMENGQGGDRGTQYRTGIYTHTDAQHRAALQSREIEQKKYSRPIMTEIKPAKVFWPAEVSHQGYLWKGGRFGSAQSAAKGCTDPIRCYG 200
BLAST of EWM22611.1 vs. NCBI_GenBank
Match: gi|298708882|emb|CBJ30839.1| (methionine sulfoxide reductase [Ectocarpus siliculosus]) HSP 1 Score: 231.106 bits (588), Expect = 2.273e-70 Identity = 110/179 (61.45%), Postives = 131/179 (73.18%), Query Frame = 0 Query: 97 LKGVVQDKSKDGYEIATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFSKPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCY 275 LKG V KS+ G++IATFAGGCFWGLELA+QRV GV+ TSVGYTQG EKPTY VCSG +GHTEAVQV+++P EVS+E LC + RINPT N G DRGTQYR G+Y H +GQ VA KV++ + + +PI TE A VYWPAE YHQ+YL KGG Q+A KG T+ IRCY Sbjct: 106 LKGEVPSKSEAGHDIATFAGGCFWGLELAFQRVPGVVATSVGYTQGAVEKPTYGEVCSGSTGHTEAVQVYYNPSEVSFEELCGVFFGRINPTQVNGQGGDRGTQYRTGVYPHTKGQSDVALKVVDGLRGNYKQPIATEIEGAKVYWPAELYHQQYLPKGGPNGMAQNAEKGATETIRCY 284
BLAST of EWM22611.1 vs. NCBI_GenBank
Match: gi|551553186|ref|XP_005763917.1| (putative peptide methione-S-sulfoxide reductase [Emiliania huxleyi CCMP1516] >gi|551576958|ref|XP_005774122.1| methionine sulfoxide reductase [Emiliania huxleyi CCMP1516] >gi|485613444|gb|EOD11488.1| putative peptide methione-S-sulfoxide reductase [Emiliania huxleyi CCMP1516] >gi|485625893|gb|EOD21693.1| methionine sulfoxide reductase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 225.328 bits (573), Expect = 3.290e-69 Identity = 109/207 (52.66%), Postives = 150/207 (72.46%), Query Frame = 0 Query: 78 GIDYSTLTGME-------AKEAAELALKGVVQDKSKDGYEIATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFS-KPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYG 276 G+DY L G +EA + AL+ V S DG+E+AT AGGCFWG+EL QR+ GV+ T VGYTQG+ +PTYD VC G +GHTEAVQ+ +DP+ ++Y +C+ LL ++PT ++VGND G+QYRHGIYYH++ Q VA+ + +AQA+ + +VTE PATV+WPAE++HQ+YL++GGRF + QSAAKGC+D +RCYG Sbjct: 5 GVDYEKLGGRGYGSIKSWGREAGQFALRDEVPSTSSDGFEVATVAGGCFWGIELRLQRLDGVVATCVGYTQGRTREPTYDDVCGGGTGHTEAVQLIYDPEVLAYSTICETLLASLDPTAVDRVGNDYGSQYRHGIYYHSDKQRGVAEAAIADAQARAGRRKVVTEVRPATVFWPAEQHHQQYLQRGGRFGSPQSAAKGCSDRVRCYG 211
BLAST of EWM22611.1 vs. NCBI_GenBank
Match: gi|676379919|ref|XP_009033238.1| (hypothetical protein AURANDRAFT_20277 [Aureococcus anophagefferens] >gi|323456290|gb|EGB12157.1| hypothetical protein AURANDRAFT_20277 [Aureococcus anophagefferens]) HSP 1 Score: 222.631 bits (566), Expect = 4.929e-68 Identity = 119/220 (54.09%), Postives = 143/220 (65.00%), Query Frame = 0 Query: 68 SIFNAAG-----KGDGIDYSTLTGME---AKEAAELALKGVVQDKSKDGYEIATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRI--NPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFSKPIVTECLPAT-VYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYG 276 S+F+AAG + I Y+ L G+ A EA + AL G KS DGY IATFA GCFWG+EL +QR+ GVI TSVGY QG +KPTY+ V + SGHTEAVQ+ +DP +SY LC+ R+ QVGNDRG QYR GIY Q VA+K L +AQ +F+ PI TE P VYWPAE YHQ+YLE GGRF++ QSAAKG T PIRCYG Sbjct: 2 SVFSAAGALWTTRSKEIPYAELPGLPQSFALEAGKNALAGTTPVKSADGYAIATFAAGCFWGVELEFQRLPGVIATSVGYVQGHKQKPTYEEVSAATSGHTEAVQLIYDPGVISYARLCEAFWARLGDGAVRYQQVGNDRGPQYRSGIYTTTSAQLDVARKSLVDAQKKFASPIQTEVEPMRGVYWPAEAYHQRYLELGGRFNSPQSAAKGDTTPIRCYG 221
BLAST of EWM22611.1 vs. NCBI_GenBank
Match: gi|551542701|ref|XP_005759537.1| (methionine sulfoxide reductase, partial [Emiliania huxleyi CCMP1516] >gi|551602919|ref|XP_005782997.1| hypothetical protein EMIHUDRAFT_57356, partial [Emiliania huxleyi CCMP1516] >gi|485607664|gb|EOD07108.1| methionine sulfoxide reductase, partial [Emiliania huxleyi CCMP1516] >gi|485635942|gb|EOD30568.1| hypothetical protein EMIHUDRAFT_57356, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 219.935 bits (559), Expect = 8.168e-68 Identity = 101/169 (59.76%), Postives = 127/169 (75.15%), Query Frame = 0 Query: 108 GYEIATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFSKPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYG 276 G+E+ATFAGGCFWG EL +QR+ GV+ T VGYTQG PTY+ VCSG +GHTEA+Q+ FDP E SYE LC LL+ ++PT +N+VGNDRGTQYRHGIY H Q + A++ LE QA+ S P+VTE LPA V++PAE YHQ+YL+KG GQ+AAK + +RCYG Sbjct: 1 GFEVATFAGGCFWGTELHFQRIPGVVATCVGYTQGGVPAPTYEQVCSGTTGHTEALQLLFDPSECSYESLCAKLLSTVDPTARNRVGNDRGTQYRHGIYSHTPEQAEAARRALELEQAKQSAPVVTEMLPARVFYPAENYHQRYLQKG-----GQNAAKNAPEKVRCYG 164
BLAST of EWM22611.1 vs. NCBI_GenBank
Match: gi|302772769|ref|XP_002969802.1| (hypothetical protein SELMODRAFT_227932 [Selaginella moellendorffii] >gi|300162313|gb|EFJ28926.1| hypothetical protein SELMODRAFT_227932 [Selaginella moellendorffii]) HSP 1 Score: 216.083 bits (549), Expect = 3.154e-66 Identity = 102/166 (61.45%), Postives = 123/166 (74.10%), Query Frame = 0 Query: 111 IATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFSKPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYG 276 +ATFA GCFW +ELA+QR+ GVI T+VGYTQG E PTY VC+G +GH EAV V +DPKEVSY L + +PT + GND G+QYR GIY+H QEK+AK+ LE+ Q + K IVTE LPAT ++PAE+YHQ+YLEKGGR QSAAKGCTDPIRCYG Sbjct: 1 MATFAAGCFWSVELAFQRIPGVIKTTVGYTQGSKESPTYHDVCTGRTGHAEAVLVEYDPKEVSYTALLDAFWKKHDPTQADGQGNDLGSQYRSGIYFHTPEQEKLAKQSLEQEQQRLGKKIVTELLPATTFYPAEDYHQQYLEKGGRGGRKQSAAKGCTDPIRCYG 166
BLAST of EWM22611.1 vs. NCBI_GenBank
Match: gi|302806812|ref|XP_002985137.1| (hypothetical protein SELMODRAFT_121679 [Selaginella moellendorffii] >gi|300146965|gb|EFJ13631.1| hypothetical protein SELMODRAFT_121679 [Selaginella moellendorffii]) HSP 1 Score: 215.698 bits (548), Expect = 4.180e-66 Identity = 102/166 (61.45%), Postives = 123/166 (74.10%), Query Frame = 0 Query: 111 IATFAGGCFWGLELAYQRVVGVIDTSVGYTQGKDEKPTYDYVCSGMSGHTEAVQVFFDPKEVSYEYLCKLLLTRINPTLKNQVGNDRGTQYRHGIYYHNEGQEKVAKKVLEEAQAQFSKPIVTECLPATVYWPAEEYHQKYLEKGGRFSAGQSAAKGCTDPIRCYG 276 +ATFA GCFW +ELA+QR+ GVI T+VGYTQG E PTY VC+G +GH EAV V +DPKEVSY L + +PT + GND G+QYR GIY+H QEK+AK+ LE+ Q + K IVTE LPAT ++PAE+YHQ+YLEKGGR QSAAKGCTDPIRCYG Sbjct: 1 MATFAAGCFWSVELAFQRIPGVIKTTVGYTQGSKESPTYHDVCTGRTGHAEAVLVEYDPKEVSYTALLDAFWKKHDPTQADGQGNDIGSQYRSGIYFHTPEQEKLAKQSLEQEQQRLGKKIVTELLPATTFYPAEDYHQQYLEKGGRGGRKQSAAKGCTDPIRCYG 166 The following BLAST results are available for this feature:
BLAST of EWM22611.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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