EWM22600.1, cds8070 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|585103163|gb|EWM22600.1| (transferase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 466.848 bits (1200), Expect = 1.130e-166 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query: 1 MSMGTCYTRCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQM 222
MSMGTCYTRCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQM
Sbjct: 1 MSMGTCYTRCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQM 222
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|951002536|ref|XP_014507362.1| (PREDICTED: uncharacterized protein At4g14100-like [Vigna radiata var. radiata]) HSP 1 Score: 154.451 bits (389), Expect = 4.125e-43 Identity = 76/179 (42.46%), Postives = 104/179 (58.10%), Query Frame = 0
Query: 41 TPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFE--KDRKDFLSDGQVQQSE 217
P WP Q ++L NR G+L T L YD PNGRN NII+ Q G+ +D E NG+++YY P E+C+ ++ VGIL+P+WL GA Y G E LC+VW + F+TY+ D T RP +WIFF G + V+ + G LEDE WQ P YCF K+ + ++ V +SE
Sbjct: 49 VPADWPHQFHSVLFINRSGDLQKTDLWYDWPNGRNFNIIQ-HQLGVLTYDLEWDNGTSFYYTLQPFDETCKIIHFDVGILRPNWLHGANYLGQEHADNFLCNVWEKVD-----FITYYEDVLTRRPVKWIFFSGMVAHVMTFEVGAVLEDEHWQAPVYCFNEIKNETSYKTNAVVLESE 221
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|729472601|ref|XP_010527438.1| (PREDICTED: uncharacterized protein At4g14100 [Tarenaya hassleriana]) HSP 1 Score: 153.295 bits (386), Expect = 4.912e-43 Identity = 80/220 (36.36%), Postives = 122/220 (55.45%), Query Frame = 0
Query: 3 MGTCYTRCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQM 222
M + R L I+ LL + G E + P WP Q ALL N G+L L YD NGRN NII+ +Q G+ +D E NG++++Y + E+ C+ + + VGIL+P+WL GA+Y G + G LC+VW + F+ Y+ D T+RP W+F+ G V+ + G LEDE WQ P YCF+++R+ FLS+G +++ +G+ +
Sbjct: 1 MASTQRRLIHFFLIITFLLVLAA-----GDVPEPDAEPVPAPWPHQFHALLFMNYSGSLEMIDLWYDWINGRNFNIIQ-KQLGILTYDLEWNNGTSFFY-RLDESRECRTVQVEVGILRPNWLDGAKYLGQRYMDGFLCNVWEKVE-----FIWYYEDVVTKRPVHWVFYTGREAHVMTYEVGAVLEDEKWQAPVYCFDQERESFLSEGGLREFKGIGTL 208
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|1032283425|gb|OAO97752.1| (hypothetical protein AXX17_AT4G16120 [Arabidopsis thaliana]) HSP 1 Score: 152.91 bits (385), Expect = 5.163e-43 Identity = 73/181 (40.33%), Postives = 112/181 (61.88%), Query Frame = 0
Query: 41 TPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQ 221
P WPPQ AL+ N G+LS L YD NGRN NII+++ G+T +D E NG++++Y E++SC++ + VGIL+P+WL GA+Y G ++V G LC+VW + F+ Y+ D +T+RP +WIF+ G ++ + G LEDE WQ P YCF K++K + G + + +G +
Sbjct: 29 VPTPWPPQFHALMFMNYSGDLSMIDLWYDWTNGRNFNIIQEQLGGIT-YDLEWNNGTSFFY-TLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLCNVWEKVD-----FIWYYEDVETKRPVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFNKEKKSLSTKGALSEFKGYKE 202
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|302805594|ref|XP_002984548.1| (hypothetical protein SELMODRAFT_16681, partial [Selaginella moellendorffii] >gi|300147936|gb|EFJ14598.1| hypothetical protein SELMODRAFT_16681, partial [Selaginella moellendorffii]) HSP 1 Score: 149.828 bits (377), Expect = 2.117e-42 Identity = 77/166 (46.39%), Postives = 102/166 (61.45%), Query Frame = 0
Query: 41 TPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWL-AGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRK 205
TP WP Q ALL QN G LS L YD PNGRN NII Q G TL+D E NG+++YY +A SC+ ++ VGIL PDWL + + Y G+E V G C+VW+++ F+ Y+ D +T+RP W+FF G V+ + PG LEDEAWQ P YCF+++
Sbjct: 2 TPTPWPEQFHALLFQNSSGKLSTIDLWYDFPNGRNFNIIH-HQLGSTLYDLEWTNGTSFYYDL--DAGSCKTMHFPVGILSPDWLVSNSTYIGVEKVGGFTCNVWSKADG----FIVYYEDVETKRPVHWLFFTGMSQYVMTFEPGKVLEDEAWQAPWYCFDREEN 160
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|18414136|ref|NP_567420.1| (transferases, transferring glycosyl groups [Arabidopsis thaliana] >gi|75116576|sp|Q67YC9.1|Y4141_ARATH RecName: Full=Uncharacterized protein At4g14100; Flags: Precursor >gi|51969522|dbj|BAD43453.1| unknown protein [Arabidopsis thaliana] >gi|51971220|dbj|BAD44302.1| unknown protein [Arabidopsis thaliana] >gi|88193798|gb|ABD42988.1| At4g14100 [Arabidopsis thaliana] >gi|332657969|gb|AEE83369.1| transferases, transferring glycosyl groups [Arabidopsis thaliana] >gi|1182267574|gb|ARJ31460.1| transferring glycosyl group transferase, partial [Arabidopsis thaliana]) HSP 1 Score: 150.599 bits (379), Expect = 5.182e-42 Identity = 78/213 (36.62%), Postives = 125/213 (58.69%), Query Frame = 0
Query: 9 RCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQ 221
R +I++ I + G+ ++ A E + P WP Q AL+ N G+LS L YD NGRN NII+++ G+T +D E NG++++Y E++SC++ + VGIL+P+WL GA+Y G ++V G LC+VW + F+ Y+ D +T+RP +WIF+ G ++ + G LEDE WQ P YCF K++K + G + + +G +
Sbjct: 4 RRPLIVIVIFIYITAGV---KIAAADEPV----PTPWPHQFHALMFMNYSGDLSMIDLWYDWTNGRNFNIIQEQLGGIT-YDLEWNNGTSFFY-TLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLCNVWEKVD-----FIWYYEDVETKRPVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFNKEKKSLSTKGALSEFKGYKE 202
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|21592998|gb|AAM64947.1| (unknown [Arabidopsis thaliana]) HSP 1 Score: 150.599 bits (379), Expect = 5.353e-42 Identity = 78/213 (36.62%), Postives = 125/213 (58.69%), Query Frame = 0
Query: 9 RCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQ 221
R +I++ I + G+ ++ A E + P WP Q AL+ N G+LS L YD NGRN NII+++ G+T +D E NG++++Y E++SC++ + VGIL+P+WL GA+Y G ++V G LC+VW + F+ Y+ D +T+RP +WIF+ G ++ + G LEDE WQ P YCF K++K + G + + +G +
Sbjct: 4 RRPLIVIVIFIYITAGV---KIAAADEPV----PTPWPHQFHALMFMNYSGDLSMIDLWYDWTNGRNFNIIQEQLGGIT-YDLEWNNGTSFFY-TLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLCNVWEKVD-----FIWYYEDVETKRPVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFNKEKKSLSTKGALSEFKGYKE 202
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|1150095507|ref|XP_020233505.1| (uncharacterized protein At4g14100-like [Cajanus cajan]) HSP 1 Score: 150.599 bits (379), Expect = 5.988e-42 Identity = 77/188 (40.96%), Postives = 105/188 (55.85%), Query Frame = 0
Query: 32 YASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGV 219
++S P WP Q ++L NR G+L T L YD PNGRN NII+ Q G+ +D E NG+++YY P ++C+ ++ VGIL+PDWL GA Y G E V LC+VW + F+ Y+ D T RP +WIF+ G + V+ + G LEDE WQ P YCF + L D Q S G+
Sbjct: 22 HSSSMAEDPVPADWPEQFHSVLFINRSGSLQKTDLWYDWPNGRNFNIIQ-HQLGVLKYDLEWDNGTSFYYTLQPFDKTCKIIHFEVGILRPDWLHGATYLGQEYVDNFLCNVWEKVD-----FIWYYEDVLTRRPVKWIFYSGMVAHVMTFEVGAVLEDENWQAPVYCFNETSTALL-DSQDASSHGM 202
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|1072983731|ref|XP_018442416.1| (PREDICTED: uncharacterized protein At4g14100 isoform X1 [Raphanus sativus]) HSP 1 Score: 150.214 bits (378), Expect = 6.172e-42 Identity = 73/178 (41.01%), Postives = 110/178 (61.80%), Query Frame = 0
Query: 41 TPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEG 218
P WP Q ALL N G+LS L YD PNGRN NII+++ G+T +D E NG+++ Y +++SC++ + VGIL+P+WL GA+Y+G + V G C+VW + F+ Y+ D +T+RP +WIF+ G V+ + G LEDE WQ P YCF K++K ++G +++ G
Sbjct: 22 VPAPWPHQFHALLFMNYSGDLSMIDLWYDWPNGRNFNIIQEQLGGIT-YDLEWNNGTSFVY-TLDDSKSCRSAQLEVGILRPNWLDGAKYQGQQLVNGFHCNVWEKVD-----FIRYYEDVETKRPVQWIFYTGREAHVMTFEVGAVLEDEKWQAPVYCFSKEKKSLSTEGALREFRG 192
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|302764044|ref|XP_002965443.1| (hypothetical protein SELMODRAFT_68863, partial [Selaginella moellendorffii] >gi|300166257|gb|EFJ32863.1| hypothetical protein SELMODRAFT_68863, partial [Selaginella moellendorffii]) HSP 1 Score: 148.673 bits (374), Expect = 6.258e-42 Identity = 77/167 (46.11%), Postives = 102/167 (61.08%), Query Frame = 0
Query: 41 TPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWL-AGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKD 206
TP WP Q ALL QN G LS L YD PNGRN NII Q G TL+D E NG+++YY +A SC+ ++ VGIL PDWL + + Y G+E V G C+VW+++ F+ Y+ D +T+RP W+FF G V+ + PG LEDEAWQ P YCF+ + +
Sbjct: 2 TPTPWPEQFHALLFQNSSGKLSTIDLWYDFPNGRNFNIIH-SQLGSTLYDLEWTNGTSFYYDL--DAGSCKTMHFPVGILSPDWLVSNSTYIGVEKVGGFTCNVWSKADG----FIVYYEDVETKRPVHWLFFTGMSQYVMTFEPGKVLEDEAWQAPWYCFDSEDNE 161 The following BLAST results are available for this feature:
BLAST of EWM22600.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|