EWM22600.1, cds8070 (CDS) Nannochloropsis gaditana

Overview
NameEWM22600.1
Unique Namecds8070
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:543150..543303 +
Alignment locationKK037247.1:543575..543759 +
Alignment locationKK037247.1:543922..544116 +
Alignment locationKK037247.1:544307..544441 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22600.1
Producttransferase-like protein
Orig transcript idgnl|cribi|Naga_100126g12.3026.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:543150..543303 +
KK037247.1supercontigKK037247.1:543575..543759 +
KK037247.1supercontigKK037247.1:543922..544116 +
KK037247.1supercontigKK037247.1:544307..544441 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005773vacuole
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|585103163|gb|EWM22600.1| (transferase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 466.848 bits (1200), Expect = 1.130e-166
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query:    1 MSMGTCYTRCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQM 222
            MSMGTCYTRCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQM
Sbjct:    1 MSMGTCYTRCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQM 222          
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|951002536|ref|XP_014507362.1| (PREDICTED: uncharacterized protein At4g14100-like [Vigna radiata var. radiata])

HSP 1 Score: 154.451 bits (389), Expect = 4.125e-43
Identity = 76/179 (42.46%), Postives = 104/179 (58.10%), Query Frame = 0
Query:   41 TPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFE--KDRKDFLSDGQVQQSE 217
             P  WP Q  ++L  NR G+L  T L YD PNGRN NII+  Q G+  +D E  NG+++YY   P  E+C+ ++  VGIL+P+WL GA Y G E     LC+VW +       F+TY+ D  T RP +WIFF G +  V+ +  G  LEDE WQ P YCF   K+   + ++  V +SE
Sbjct:   49 VPADWPHQFHSVLFINRSGDLQKTDLWYDWPNGRNFNIIQ-HQLGVLTYDLEWDNGTSFYYTLQPFDETCKIIHFDVGILRPNWLHGANYLGQEHADNFLCNVWEKVD-----FITYYEDVLTRRPVKWIFFSGMVAHVMTFEVGAVLEDEHWQAPVYCFNEIKNETSYKTNAVVLESE 221          
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|729472601|ref|XP_010527438.1| (PREDICTED: uncharacterized protein At4g14100 [Tarenaya hassleriana])

HSP 1 Score: 153.295 bits (386), Expect = 4.912e-43
Identity = 80/220 (36.36%), Postives = 122/220 (55.45%), Query Frame = 0
Query:    3 MGTCYTRCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQM 222
            M +   R     L I+ LL +       G   E   +  P  WP Q  ALL  N  G+L    L YD  NGRN NII+ +Q G+  +D E  NG++++Y +  E+  C+ + + VGIL+P+WL GA+Y G   + G LC+VW +       F+ Y+ D  T+RP  W+F+ G    V+ +  G  LEDE WQ P YCF+++R+ FLS+G +++ +G+  +
Sbjct:    1 MASTQRRLIHFFLIITFLLVLAA-----GDVPEPDAEPVPAPWPHQFHALLFMNYSGSLEMIDLWYDWINGRNFNIIQ-KQLGILTYDLEWNNGTSFFY-RLDESRECRTVQVEVGILRPNWLDGAKYLGQRYMDGFLCNVWEKVE-----FIWYYEDVVTKRPVHWVFYTGREAHVMTYEVGAVLEDEKWQAPVYCFDQERESFLSEGGLREFKGIGTL 208          
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|1032283425|gb|OAO97752.1| (hypothetical protein AXX17_AT4G16120 [Arabidopsis thaliana])

HSP 1 Score: 152.91 bits (385), Expect = 5.163e-43
Identity = 73/181 (40.33%), Postives = 112/181 (61.88%), Query Frame = 0
Query:   41 TPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQ 221
             P  WPPQ  AL+  N  G+LS   L YD  NGRN NII+++  G+T +D E  NG++++Y    E++SC++  + VGIL+P+WL GA+Y G ++V G LC+VW +       F+ Y+ D +T+RP +WIF+ G    ++ +  G  LEDE WQ P YCF K++K   + G + + +G  +
Sbjct:   29 VPTPWPPQFHALMFMNYSGDLSMIDLWYDWTNGRNFNIIQEQLGGIT-YDLEWNNGTSFFY-TLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLCNVWEKVD-----FIWYYEDVETKRPVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFNKEKKSLSTKGALSEFKGYKE 202          
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|302805594|ref|XP_002984548.1| (hypothetical protein SELMODRAFT_16681, partial [Selaginella moellendorffii] >gi|300147936|gb|EFJ14598.1| hypothetical protein SELMODRAFT_16681, partial [Selaginella moellendorffii])

HSP 1 Score: 149.828 bits (377), Expect = 2.117e-42
Identity = 77/166 (46.39%), Postives = 102/166 (61.45%), Query Frame = 0
Query:   41 TPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWL-AGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRK 205
            TP  WP Q  ALL QN  G LS   L YD PNGRN NII   Q G TL+D E  NG+++YY    +A SC+ ++  VGIL PDWL + + Y G+E V G  C+VW+++      F+ Y+ D +T+RP  W+FF G    V+ + PG  LEDEAWQ P YCF+++  
Sbjct:    2 TPTPWPEQFHALLFQNSSGKLSTIDLWYDFPNGRNFNIIH-HQLGSTLYDLEWTNGTSFYYDL--DAGSCKTMHFPVGILSPDWLVSNSTYIGVEKVGGFTCNVWSKADG----FIVYYEDVETKRPVHWLFFTGMSQYVMTFEPGKVLEDEAWQAPWYCFDREEN 160          
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|18414136|ref|NP_567420.1| (transferases, transferring glycosyl groups [Arabidopsis thaliana] >gi|75116576|sp|Q67YC9.1|Y4141_ARATH RecName: Full=Uncharacterized protein At4g14100; Flags: Precursor >gi|51969522|dbj|BAD43453.1| unknown protein [Arabidopsis thaliana] >gi|51971220|dbj|BAD44302.1| unknown protein [Arabidopsis thaliana] >gi|88193798|gb|ABD42988.1| At4g14100 [Arabidopsis thaliana] >gi|332657969|gb|AEE83369.1| transferases, transferring glycosyl groups [Arabidopsis thaliana] >gi|1182267574|gb|ARJ31460.1| transferring glycosyl group transferase, partial [Arabidopsis thaliana])

HSP 1 Score: 150.599 bits (379), Expect = 5.182e-42
Identity = 78/213 (36.62%), Postives = 125/213 (58.69%), Query Frame = 0
Query:    9 RCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQ 221
            R  +I++ I   +  G+   ++  A E +    P  WP Q  AL+  N  G+LS   L YD  NGRN NII+++  G+T +D E  NG++++Y    E++SC++  + VGIL+P+WL GA+Y G ++V G LC+VW +       F+ Y+ D +T+RP +WIF+ G    ++ +  G  LEDE WQ P YCF K++K   + G + + +G  +
Sbjct:    4 RRPLIVIVIFIYITAGV---KIAAADEPV----PTPWPHQFHALMFMNYSGDLSMIDLWYDWTNGRNFNIIQEQLGGIT-YDLEWNNGTSFFY-TLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLCNVWEKVD-----FIWYYEDVETKRPVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFNKEKKSLSTKGALSEFKGYKE 202          
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|21592998|gb|AAM64947.1| (unknown [Arabidopsis thaliana])

HSP 1 Score: 150.599 bits (379), Expect = 5.353e-42
Identity = 78/213 (36.62%), Postives = 125/213 (58.69%), Query Frame = 0
Query:    9 RCSIILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGVAQ 221
            R  +I++ I   +  G+   ++  A E +    P  WP Q  AL+  N  G+LS   L YD  NGRN NII+++  G+T +D E  NG++++Y    E++SC++  + VGIL+P+WL GA+Y G ++V G LC+VW +       F+ Y+ D +T+RP +WIF+ G    ++ +  G  LEDE WQ P YCF K++K   + G + + +G  +
Sbjct:    4 RRPLIVIVIFIYITAGV---KIAAADEPV----PTPWPHQFHALMFMNYSGDLSMIDLWYDWTNGRNFNIIQEQLGGIT-YDLEWNNGTSFFY-TLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLCNVWEKVD-----FIWYYEDVETKRPVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFNKEKKSLSTKGALSEFKGYKE 202          
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|1150095507|ref|XP_020233505.1| (uncharacterized protein At4g14100-like [Cajanus cajan])

HSP 1 Score: 150.599 bits (379), Expect = 5.988e-42
Identity = 77/188 (40.96%), Postives = 105/188 (55.85%), Query Frame = 0
Query:   32 YASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEGV 219
            ++S       P  WP Q  ++L  NR G+L  T L YD PNGRN NII+  Q G+  +D E  NG+++YY   P  ++C+ ++  VGIL+PDWL GA Y G E V   LC+VW +       F+ Y+ D  T RP +WIF+ G +  V+ +  G  LEDE WQ P YCF +     L D Q   S G+
Sbjct:   22 HSSSMAEDPVPADWPEQFHSVLFINRSGSLQKTDLWYDWPNGRNFNIIQ-HQLGVLKYDLEWDNGTSFYYTLQPFDKTCKIIHFEVGILRPDWLHGATYLGQEYVDNFLCNVWEKVD-----FIWYYEDVLTRRPVKWIFYSGMVAHVMTFEVGAVLEDENWQAPVYCFNETSTALL-DSQDASSHGM 202          
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|1072983731|ref|XP_018442416.1| (PREDICTED: uncharacterized protein At4g14100 isoform X1 [Raphanus sativus])

HSP 1 Score: 150.214 bits (378), Expect = 6.172e-42
Identity = 73/178 (41.01%), Postives = 110/178 (61.80%), Query Frame = 0
Query:   41 TPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKDFLSDGQVQQSEG 218
             P  WP Q  ALL  N  G+LS   L YD PNGRN NII+++  G+T +D E  NG+++ Y    +++SC++  + VGIL+P+WL GA+Y+G + V G  C+VW +       F+ Y+ D +T+RP +WIF+ G    V+ +  G  LEDE WQ P YCF K++K   ++G +++  G
Sbjct:   22 VPAPWPHQFHALLFMNYSGDLSMIDLWYDWPNGRNFNIIQEQLGGIT-YDLEWNNGTSFVY-TLDDSKSCRSAQLEVGILRPNWLDGAKYQGQQLVNGFHCNVWEKVD-----FIRYYEDVETKRPVQWIFYTGREAHVMTFEVGAVLEDEKWQAPVYCFSKEKKSLSTEGALREFRG 192          
BLAST of EWM22600.1 vs. NCBI_GenBank
Match: gi|302764044|ref|XP_002965443.1| (hypothetical protein SELMODRAFT_68863, partial [Selaginella moellendorffii] >gi|300166257|gb|EFJ32863.1| hypothetical protein SELMODRAFT_68863, partial [Selaginella moellendorffii])

HSP 1 Score: 148.673 bits (374), Expect = 6.258e-42
Identity = 77/167 (46.11%), Postives = 102/167 (61.08%), Query Frame = 0
Query:   41 TPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWL-AGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKD 206
            TP  WP Q  ALL QN  G LS   L YD PNGRN NII   Q G TL+D E  NG+++YY    +A SC+ ++  VGIL PDWL + + Y G+E V G  C+VW+++      F+ Y+ D +T+RP  W+FF G    V+ + PG  LEDEAWQ P YCF+ +  +
Sbjct:    2 TPTPWPEQFHALLFQNSSGKLSTIDLWYDFPNGRNFNIIH-SQLGSTLYDLEWTNGTSFYYDL--DAGSCKTMHFPVGILSPDWLVSNSTYIGVEKVGGFTCNVWSKADG----FIVYYEDVETKRPVHWLFFTGMSQYVMTFEPGKVLEDEAWQAPWYCFDSEDNE 161          
The following BLAST results are available for this feature:
BLAST of EWM22600.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103163|gb|EWM22600.1|1.130e-166100.00transferase-like protein [Nannochloropsis gaditana... [more]
gi|951002536|ref|XP_014507362.1|4.125e-4342.46PREDICTED: uncharacterized protein At4g14100-like ... [more]
gi|729472601|ref|XP_010527438.1|4.912e-4336.36PREDICTED: uncharacterized protein At4g14100 [Tare... [more]
gi|1032283425|gb|OAO97752.1|5.163e-4340.33hypothetical protein AXX17_AT4G16120 [Arabidopsis ... [more]
gi|302805594|ref|XP_002984548.1|2.117e-4246.39hypothetical protein SELMODRAFT_16681, partial [Se... [more]
gi|18414136|ref|NP_567420.1|5.182e-4236.62transferases, transferring glycosyl groups [Arabid... [more]
gi|21592998|gb|AAM64947.1|5.353e-4236.62unknown [Arabidopsis thaliana][more]
gi|1150095507|ref|XP_020233505.1|5.988e-4240.96uncharacterized protein At4g14100-like [Cajanus ca... [more]
gi|1072983731|ref|XP_018442416.1|6.172e-4241.01PREDICTED: uncharacterized protein At4g14100 isofo... [more]
gi|302764044|ref|XP_002965443.1|6.258e-4246.11hypothetical protein SELMODRAFT_68863, partial [Se... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8092rna8092Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications