EWM22598.1, cds8067 (CDS) Nannochloropsis gaditana

Overview
NameEWM22598.1
Unique Namecds8067
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:537275..537395 +
Alignment locationKK037247.1:537470..537711 +
Alignment locationKK037247.1:537813..537923 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22598.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100126g15.3024.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:537275..537395 +
KK037247.1supercontigKK037247.1:537470..537711 +
KK037247.1supercontigKK037247.1:537813..537923 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22598.1 vs. NCBI_GenBank
Match: gi|585103161|gb|EWM22598.1| (hypothetical protein Naga_100126g15 [Nannochloropsis gaditana])

HSP 1 Score: 320.087 bits (819), Expect = 1.226e-110
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 
Query:    1 MSRDALCSQVDAEFLHEATRMPVCLRRSMDALERIWETRKVPVCLGKDLYQALCSLLCQAWRTSVSMKRSKRLPGRFITPLLTFVLPEVGGGGCTYKDTGKGKVVFAVSAVVRARIDLEEHGGSMRVGKGETCDGGKQIEGFKLDGDSRTMGVTSLT 157
            MSRDALCSQVDAEFLHEATRMPVCLRRSMDALERIWETRKVPVCLGKDLYQALCSLLCQAWRTSVSMKRSKRLPGRFITPLLTFVLPEVGGGGCTYKDTGKGKVVFAVSAVVRARIDLEEHGGSMRVGKGETCDGGKQIEGFKLDGDSRTMGVTSLT
Sbjct:    1 MSRDALCSQVDAEFLHEATRMPVCLRRSMDALERIWETRKVPVCLGKDLYQALCSLLCQAWRTSVSMKRSKRLPGRFITPLLTFVLPEVGGGGCTYKDTGKGKVVFAVSAVVRARIDLEEHGGSMRVGKGETCDGGKQIEGFKLDGDSRTMGVTSLT 157
The following BLAST results are available for this feature:
BLAST of EWM22598.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103161|gb|EWM22598.1|1.226e-110100.00hypothetical protein Naga_100126g15 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8089rna8089Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications