EWM22612.1, cds8062 (CDS) Nannochloropsis gaditana

Overview
NameEWM22612.1
Unique Namecds8062
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:527421..527730 -
Alignment locationKK037247.1:525958..527192 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22612.1
ProductAmino acid transporter, transmembrane
Orig transcript idgnl|cribi|Naga_100126g24.3038.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:527421..527730 -
KK037247.1supercontigKK037247.1:525958..527192 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
Homology
BLAST of EWM22612.1 vs. NCBI_GenBank
Match: gi|553178957|ref|XP_005852626.1| (hypothetical protein NGA_0541502 [Nannochloropsis gaditana CCMP526] >gi|422295905|gb|EKU23204.1| hypothetical protein NGA_0541502 [Nannochloropsis gaditana CCMP526] >gi|585103175|gb|EWM22612.1| Amino acid transporter, transmembrane [Nannochloropsis gaditana])

HSP 1 Score: 1025 bits (2649), Expect = 0.000e+0
Identity = 514/514 (100.00%), Postives = 514/514 (100.00%), Query Frame = 0
Query:    1 MKATAAATAMLLLPQAALSHSSPLYTSFSGPRAHFPATFLATVPSHTLSNTKRPPILNQRRRVAVIRGGAAVTAEGSFQVPPAGTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSTRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLKAFILK 514
            MKATAAATAMLLLPQAALSHSSPLYTSFSGPRAHFPATFLATVPSHTLSNTKRPPILNQRRRVAVIRGGAAVTAEGSFQVPPAGTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSTRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLKAFILK
Sbjct:    1 MKATAAATAMLLLPQAALSHSSPLYTSFSGPRAHFPATFLATVPSHTLSNTKRPPILNQRRRVAVIRGGAAVTAEGSFQVPPAGTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSTRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLKAFILK 514          
BLAST of EWM22612.1 vs. NCBI_GenBank
Match: gi|298706151|emb|CBJ49079.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 350.903 bits (899), Expect = 1.902e-112
Identity = 195/433 (45.03%), Postives = 288/433 (66.51%), Query Frame = 0
Query:   79 QVPPAGTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSTRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLKAF 511
            Q P A + S     G +V  + FNLIKN++GAG+L++P GV AFS +  A+VP VA+ + +G +S YCF+LI RVCA     +YG+AW K++G+KT+W+  ++CT KTF AC A+SIII D F+ +  A  G P +LA RTN++  +++LVLLPLC+LK  + L+  S++G+LGTV+T AV+ +R  D SY  GG+F   +A   RP + SG+ +  ++    +LVSMLST+F+AH+NAPKFY EL+++S+P+ N VV +SF         +    YLTFGGAS+  ILNN+A  D LA  CRLAI +SIV GYPL F+G + G L+ +G   P+   + V T +LL   + + V L D+GFVVS GGA+LGS +++IFP +++I    +    G+ ++    + E++ N  I+ALGV LA++G  +S+ K+F
Sbjct:   54 QAPQAESSS----SGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRAAVVPTVAMIVALGGMSGYCFSLIGRVCAATGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIIGDVFADVLAAF-GAPGVLAARTNILCLVSALVLLPLCLLKDLSALSYTSIMGVLGTVYTAAVMGIRYFDNSYVEGGRFFAGLAKDARP-VFSGTGA--MNSQALILVSMLSTAFVAHFNAPKFYAELKDKSVPRFNTVVGSSFAAAIGLVVIMTLFPYLTFGGASKSFILNNFATSDRLATSCRLAIASSIVGGYPLVFMGAKTGALAAVGISNPTENQRKVGTTLLLGFFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWIAQSKKDAKWGKPLKGWR-RAEIMGNYVISALGVALAVLGGGLSIKKSF 477          
BLAST of EWM22612.1 vs. NCBI_GenBank
Match: gi|299472250|emb|CBN77220.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 347.821 bits (891), Expect = 7.510e-112
Identity = 200/439 (45.56%), Postives = 286/439 (65.15%), Query Frame = 0
Query:   75 EGSFQVPPAGTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSTRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAV--KREVLLNKGITALGVLLAIIGATVSVLKAF 511
             G  +   A +E GD    S +S + FNL KNILGAG+LSLP+GV AFS +  A+VPA  +   +G++SAY F LI R CA    E+Y ++W ++VG+K+AW+   AC    F  C AF+III DSFS+L   T G PAL+A+R+N+I+ +++ VLLPL +LK+   L   S+LG  G V+T  ++A+R  DGSYA GG+FH  + A+  P   +  ++P+      VLVSMLST++ AH+NAP FY EL++ ++P+ +K+V  SF    A    +   G++TFGGAS G ILNNYA  D LA + R+A+ +S+VF YPL FVG+RDG+  + G K   TR +T  T+ LLA V+  ++ L D+GFV S GGAL+GS I+Y+FPA++F+K + +K     V    A   KRE+ LN GI A+GV + ++G  +SVL+ F
Sbjct:    2 SGGGEGSQAASEEGDK---SGMSASVFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSAL-AKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTNPIC---FLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFMTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMSGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAVGVAMGVLGCVISVLETF 433          
BLAST of EWM22612.1 vs. NCBI_GenBank
Match: gi|1072231485|gb|OEU16217.1| (Aa_trans-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 340.887 bits (873), Expect = 1.835e-109
Identity = 179/414 (43.24%), Postives = 267/414 (64.49%), Query Frame = 0
Query:   94 SSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSTRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSV 507
            ++V+   FNL+K I+GAGVLSLP+G+ AF+S P  ++PAV+L   +G LSAY F LI R CA    ++Y +AW  +V +K++W+   A T KT CAC A+S+I+ D+F SL         + + +  V + +TS+VLLPLC++K+ + LAPFSL+G LG ++T   + +R    +Y   G F   +A SLRP      ++ + +P   +LVSMLST+++AH+NAPKFY  L+++++PK  KVV  SF    + FA I   G+LTFG +S GLILNNY+ +D +  + R+A+  S+VF YPL FVG RDGVL LL  K  + +TQ V T+ LL+ ++ LA+ + DV FV++L GA LG+ +IY+FP ++F   + +KV       T   KREV L  G   LG+L+ I+G  +++
Sbjct:    3 ATVTQLIFNLVKGIVGAGVLSLPAGIAAFASGPTGVIPAVSLIAIIGGLSAYGFALIGRCCAYTNTKSYRDAWSATVSEKSSWLPATAVTVKTICACLAYSMILGDTFVSLLSTV----GMASSKVPVTIGLTSIVLLPLCLMKNLSSLAPFSLVGSLGMLYTAVAMCVRYFGKAYTATGGFGNDMAPSLRPKFGPVGAAGVFTPSAAILVSMLSTAYMAHFNAPKFYNGLKDKTLPKYYKVVSTSFAISISIFALIASIGFLTFGSSSSGLILNNYSTRDGIMNLSRIAVAVSLVFSYPLAFVGARDGVLDLLKMKG-TAKTQNVLTVALLSGITGLALVIPDVSFVMALAGATLGNGLIYVFPFLMFRGAIKKKVD-----ATKGEKREVKLAMGSAILGILMGILGTKMAL 406          
BLAST of EWM22612.1 vs. NCBI_GenBank
Match: gi|219129532|ref|XP_002184941.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403726|gb|EEC43677.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 332.413 bits (851), Expect = 5.631e-105
Identity = 197/476 (41.39%), Postives = 291/476 (61.13%), Query Frame = 0
Query:   45 SHTLSNTKRPPILNQRRRVAVIRGGAAVTA-EGSFQVPPAGTESGD------GNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQ--FHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSTRTQTVT--TLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLK 509
            SHT  +T  P + +    +  +RGGA   A   +    P     G+      G+  ++V++  FNL+K I+G GVLSLP+G+ AF   P ALVPA+AL   +G LS Y F +I RVCA     +Y +AW +SVG+ T+W+   + T KTF AC AFS+++AD+FSSL G +        QRT V++ +T+++LLPLC +K+ A LAPFSLLG++G  +T   + +R LDGSY+ GG     E++AA+LRP   +     + SP   +LV MLST+++AH+NAPKFY EL+N ++P+ ++VV  SF        FI   G+LTFG  + GL+LNNYA +D    M R+A+  S+VF YPL F G RDGVL LL   + S +   +   T++LLAV++TLA  LRDV FV++ GGA LG+ + Y++PAI++ K +  K    E       +  V ++     LG+++  +GA +++ K
Sbjct:   48 SHT--DTGSPDVAHP---IVTLRGGAKAKAPTKTLPKSPRKVHGGNAPVVAVGSGTATVASEIFNLVKAIVGVGVLSLPAGIAAFGDAPSALVPALALIAIIGVLSGYGFAIIGRVCAYTGATSYRDAWSRSVGEGTSWIPAWSTTLKTFLACLAFSMVLADTFSSLLGQSAD------QRTQVLLAVTAIILLPLCWMKNLASLAPFSLLGVMGMAYTAFAMTVRYLDGSYSTGGTGVLVESVAAALRPKFGNAGWESVASPSSLILVCMLSTAYMAHFNAPKFYLELQNNTLPRYHRVVGTSFGISILLMGFITAIGFLTFGANASGLVLNNYASKDSWMSMSRVAVAVSLVFSYPLAFQGCRDGVLDLLNVSSESRKNSLLNFTTILLLAVLTTLAAALRDVSFVLAFGGATLGNLLTYVYPAIMY-KAVVDKQGRKE-------RLGVTISSLSAVLGLVMGAVGAKLALDK 504          
BLAST of EWM22612.1 vs. NCBI_GenBank
Match: gi|223993209|ref|XP_002286288.1| (hypothetical protein THAPSDRAFT_20889 [Thalassiosira pseudonana CCMP1335] >gi|220977603|gb|EED95929.1| hypothetical protein THAPSDRAFT_20889 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 330.102 bits (845), Expect = 3.662e-104
Identity = 180/447 (40.27%), Postives = 267/447 (59.73%), Query Frame = 0
Query:   68 GGAAVTAEGSFQVPPAGTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSTRTQ----TVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIF---IKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSV 507
            GG AV +EG+  +P                   FNL+K+I+GAGVLSLP+G+ AF + P AL+PA  LT  +G++SAY F LIARVC +    +Y +AW+K+ G KT+W++  +     F    ++S+I+ADS   L        ++   RT  ++ +T+L+LLPLC++K+ A LAPFSLLGI+G  +T   I +R   G+YA GG+F   IAA+L+PS  S  +S ++S    +LV MLST++IAH+NAP+FY EL++ +IP+  KV   SF   TA +A +    +LTFG    GLILNNY+ +D+L    R A+  S++F YPL FVG RDG L LL  K P  +        TT  LL ++S LA  L D+ FV S+ GA+ G+ +I+++P+++F   IK +  K   GE       K+E      +  +G+ + IIG  +++
Sbjct:   78 GGEAVASEGTATIPDE----------------IFNLVKSIVGAGVLSLPAGIAAFGNAPSALIPATILTTAIGAISAYTFMLIARVCKMTGATSYADAWDKTRGTKTSWIIAFSSALDCFAGNLSYSMILADSIRDLLSTF----SIATTRTKSLIGVTTLILLPLCLVKNLATLAPFSLLGIMGMAYTSFAIGIRYFGGAYAAGGKFLPEIAANLQPSFGSVGASGVMSANSLILVCMLSTAYIAHFNAPRFYRELKDNTIPRFGKVTGISFGISTAIYAAVSAMAFLTFGANCDGLILNNYSTKDLLISASRFAVAISLIFSYPLLFVGTRDGTLDLL--KVPEEKRSASLLNQTTFALLGMISALAWKLTDLSFVSSISGAVFGTALIFVYPSLMFRAAIKNLGDKATDGE-------KKESTFAMLVNLVGIAVGIIGTKMAL 495          
BLAST of EWM22612.1 vs. NCBI_GenBank
Match: gi|922863522|gb|KOO30945.1| (hypothetical protein Ctob_009615 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 325.094 bits (832), Expect = 2.657e-102
Identity = 214/483 (44.31%), Postives = 298/483 (61.70%), Query Frame = 0
Query:   43 VPSHTLSNTKRPPI-LNQRRRVAVIRGGAAVTAEGSFQVPPAGTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSS-PLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSF-NFCTAAFAF-------IMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLG--RKAPSTRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFI----KTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLK 509
            +P   +   +RP +        AV  G   + A G     PAGT        ++VS +T NL KNI+GAGVL+L SGV AFS++P+A+VPA+AL + +G +S Y F LIARV       TY + W K  G + + +      FKT+    +++II+ DSF+S+  +  G P LL      +  +++ VLLPL +L+  + LA  S++G  GT++T   I LRLLDGSYA GG FH AIAA+ +P  L+ S++ PLL+P  FVLVSMLST+F+AHYNAPK++ EL   ++P      Q +F   C  AF         IM  GYLTFGGASQGLILNNYA  D LA + RL I ASI+F YPL FVG+R+GVL +LG   KA      T++T++L+ V++ LA+ L+++G VV+ GGALLGS ++Y+FPA++FI    K  A   A G+ +  PA + E+  N G+  LG+ LA IG ++ VLK
Sbjct:   17 LPQMNMKGIQRPQLRAGGSDASAVEAGNGDLVAAG--PTVPAGT--------ATVSASTINLSKNIVGAGVLALASGVAAFSASPIAIVPAMALLLFLGGVSFYTFMLIARVGQEMGTATYKDTWAKIFGSQLSIIPALTIAFKTYVGGLSYTIILGDSFASI-ASLVGAPTLLRNSNFWVCTLSAFVLLPLSLLRDLSSLAVGSVIGTAGTLYTALFIWLRLLDGSYAAGGAFHSAIAATAQPRFLAASAARPLLNPSAFVLVSMLSTAFLAHYNAPKYFNEL---AVPTDGSTKQQAFTRVCAQAFGLAALLMGSIMAGGYLTFGGASQGLILNNYATSDPLAFIARLGISASILFSYPLNFVGLREGVLGMLGLRGKAADPSVHTLSTVLLVIVMNGLALKLKNLGLVVAFGGALLGSMLVYVFPALMFIFATRKEEAALAAKGKTL-APARRNEMYANIGLVGLGLFLAAIGCSM-VLK 483          
BLAST of EWM22612.1 vs. NCBI_GenBank
Match: gi|1210524410|dbj|GAX17139.1| (hypothetical protein FisN_5Hu525 [Fistulifera solaris])

HSP 1 Score: 318.931 bits (816), Expect = 3.523e-100
Identity = 174/426 (40.85%), Postives = 253/426 (59.39%), Query Frame = 0
Query:   90 GNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYA-PGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLL-----GRKAPSTRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLK 509
            G   +++    FNL+K I+G GVLSLP+G+  F+ +P  L PA+ L   MG LSA  F  I RVCA     +Y +AW  SVG +T+W+   + T KT  AC A+S+++AD+F SL G+T        QRT V++ +T  +LLPLC LK  A L+PFSLLG+ G  +TG  + +R LDGSY+ PG     A++ +L+P   S   + +  P   +LV MLST+++AH+NAPKFY EL+N ++ + ++VV  SF         I   G+LTFG A  GL+LNNYA +DVL +  R+A+  ++VF +PL F G RDG L LL      R  P   T    T+VLL  ++  A  L+DV FV++ GGA LG+ + Y++PAI++   + ++   GE          VL N     LG+++  IGA +++ K
Sbjct:   67 GKGTATIPQEVFNLVKGIVGVGVLSLPAGIAVFADSPAGLGPALFLIAAMGILSAVGFATIGRVCAYTGATSYRQAWSLSVGPRTSWIPSWSATLKTSMACLAYSMVLADTFCSLLGST--------QRTTVLLGLTVAILLPLCWLKDLASLSPFSLLGVCGMAYTGLAMTIRYLDGSYSNPGSSLLAAVSDNLKPKFGSSDWTSIFQPNSLILVCMLSTAYMAHFNAPKFYNELKNNTLARYHQVVGTSFGISILLMGAITAVGFLTFGSACSGLVLNNYASKDVLIQASRVAVAVALVFSFPLAFQGFRDGALDLLQVPVEKRSNPLLNT---VTIVLLGAITAAAATLKDVSFVLAFGGATLGNALTYVYPAIMYASVVRKQNRKGETA-------NVLFNNMSAILGLIMGAIGAKMALDK 474          
BLAST of EWM22612.1 vs. NCBI_GenBank
Match: gi|1210532155|dbj|GAX09221.1| (hypothetical protein FisN_17Lu316 [Fistulifera solaris])

HSP 1 Score: 318.546 bits (815), Expect = 5.793e-100
Identity = 182/464 (39.22%), Postives = 265/464 (57.11%), Query Frame = 0
Query:   65 VIRGGAAVTAEGSF-------------QVPPAGTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYA-PGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLL-----GRKAPSTRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLK 509
            ++RGGA   A+  F               P     +G G   +++    FNL+K I+G GVLSLP+G+  F+ +P  L PA+ L   MG LSA  F  I RVCA     +Y +AW  SVG +T+W+   + T KT  AC A+S+++AD+F SL G+T        QRT V++ +T  +LLPLC LK  A L+PFSLLG+ G  +TG  + +R LDGSY+ PG     A++ +L+P   S   + +  P   +LV MLST+++AH+NAPKFY EL+N ++ + ++VV  SF         I   G+LTFG A  GL+LNNYA +DVL +  R+A+  ++VF +PL F G RDG L LL      R  P   T    T+VLL  ++  A  L+DV FV++ GGA LG+ + Y++PAI++   + ++   GE          VL N     LG+++  IGA +++ K
Sbjct:   30 LVRGGAQPKAKKRFVRPPAPFRPPAKANKPVEKVVAGTGT--ATIPQEVFNLVKGIVGVGVLSLPAGIAVFADSPAGLGPALFLIAAMGILSAVGFATIGRVCAYTGATSYRQAWSLSVGPRTSWIPSWSATLKTSMACLAYSMVLADTFCSLLGST--------QRTTVLLGLTVAILLPLCWLKDLASLSPFSLLGVCGMAYTGLAMTIRYLDGSYSNPGSSLLAAVSDNLKPKFGSSDWTSIFQPNSLILVCMLSTAYMAHFNAPKFYNELKNNTLARYHQVVGTSFGISILLMGAITTVGFLTFGSACSGLVLNNYASKDVLIQASRVAVAIALVFSFPLAFQGFRDGALDLLQVPVEKRSNPLLNT---VTIVLLGAITAAAATLKDVSFVLAFGGATLGNALTYVYPAIMYASVVRKQNRKGETA-------NVLFNNMSAVLGLVMGAIGAKMALDK 473          
BLAST of EWM22612.1 vs. NCBI_GenBank
Match: gi|1072231483|gb|OEU16215.1| (hypothetical protein FRACYDRAFT_208094 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 315.849 bits (808), Expect = 1.061e-99
Identity = 186/420 (44.29%), Postives = 266/420 (63.33%), Query Frame = 0
Query:   92 KGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAP----STRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSV 507
            +G+S+    FNL+K I+G GVLSLP+GV AF S P A +PA  L   +G LS Y F LI +VCA    ++Y EAW ++VG+ T+W+   + TFKTF AC AFS+++AD+FSSL   T         R   ++ +T+LVLLPLC+LK+   LAPFSLLG++G  +T   + +RLLDGSY+  G+  E I ++LRP   +  ++ +LSP   +LV MLST+++AH+NAPKFY EL+  ++P+ NKVV   F        FI   G+LTFG +  GL+LNNYA  D+   M R+A+  S+VF YPL F G RDG L L   K P    S RT  + T++LL V+++ A  LRDV FV++ GGA LG+ + Y++PA+++   +AQ+  T E       K  V ++     LGV++  +GAT++V
Sbjct:    7 EGASIPNEVFNLVKGIVGVGVLSLPAGVAAFGSAPSAFIPAGILIAVIGILSGYGFALIGKVCAYTGAKSYREAWSRTVGEGTSWIPAYSVTFKTFLACLAFSMVLADTFSSLLETT---------RNTTLLVVTALVLLPLCLLKNLKSLAPFSLLGVMGMAYTAVAMTVRLLDGSYSNEGKLVEQITSNLRPQFGNLGAASVLSPNALILVCMLSTAYMAHFNAPKFYLELKQNTLPRFNKVVGLGFGISIFLMGFITMVGFLTFGKSCDGLVLNNYAGTDMWMGMSRIAVAVSLVFSYPLAFTGCRDGFLDL--AKIPVDKRSARTLNLVTVMLLGVITSAACKLRDVSFVLAFGGATLGNALTYVYPALMYRAVVAQQGRTEE-------KFGVNVSMASAVLGVVMGAVGATMAV 408          
The following BLAST results are available for this feature:
BLAST of EWM22612.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553178957|ref|XP_005852626.1|0.000e+0100.00hypothetical protein NGA_0541502 [Nannochloropsis ... [more]
gi|298706151|emb|CBJ49079.1|1.902e-11245.03conserved unknown protein [Ectocarpus siliculosus][more]
gi|299472250|emb|CBN77220.1|7.510e-11245.56conserved unknown protein [Ectocarpus siliculosus][more]
gi|1072231485|gb|OEU16217.1|1.835e-10943.24Aa_trans-domain-containing protein, partial [Fragi... [more]
gi|219129532|ref|XP_002184941.1|5.631e-10541.39predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|223993209|ref|XP_002286288.1|3.662e-10440.27hypothetical protein THAPSDRAFT_20889 [Thalassiosi... [more]
gi|922863522|gb|KOO30945.1|2.657e-10244.31hypothetical protein Ctob_009615 [Chrysochromulina... [more]
gi|1210524410|dbj|GAX17139.1|3.523e-10040.85hypothetical protein FisN_5Hu525 [Fistulifera sola... [more]
gi|1210532155|dbj|GAX09221.1|5.793e-10039.22hypothetical protein FisN_17Lu316 [Fistulifera sol... [more]
gi|1072231483|gb|OEU16215.1|1.061e-9944.29hypothetical protein FRACYDRAFT_208094 [Fragilario... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8084rna8084Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications