EWM22653.1, cds8042 (CDS) Nannochloropsis gaditana

Overview
NameEWM22653.1
Unique Namecds8042
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:478044..479393 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22653.1
Producthistone deacetylase superfamily
Orig transcript idgnl|cribi|Naga_100023g53.3969.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:478044..479393 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR023801His_deacetylse_dom
IPR000286His_deacetylse
Homology
BLAST of EWM22653.1 vs. NCBI_GenBank
Match: gi|585103218|gb|EWM22653.1| (histone deacetylase superfamily [Nannochloropsis gaditana])

HSP 1 Score: 926.776 bits (2394), Expect = 0.000e+0
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0
Query:    1 MTLVRSGSRTTTPLSQVDVQFNRVSNALDIQKHIRPDRDRKSHHTPRGGRSSICQATALLTPQTNVQAGKRRKDQMRKEAAMMIACLVFIGAGVRSLRPALKVTRRFSSVVVTSNTAQGGDQRGVKDPLYFFYNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFSLPGVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVLQSDLPVGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYPSDSDPSSGPYADIINAHADVYVGAAEFFGGGSKMVPLLR 449
            MTLVRSGSRTTTPLSQVDVQFNRVSNALDIQKHIRPDRDRKSHHTPRGGRSSICQATALLTPQTNVQAGKRRKDQMRKEAAMMIACLVFIGAGVRSLRPALKVTRRFSSVVVTSNTAQGGDQRGVKDPLYFFYNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFSLPGVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVLQSDLPVGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYPSDSDPSSGPYADIINAHADVYVGAAEFFGGGSKMVPLLR
Sbjct:    1 MTLVRSGSRTTTPLSQVDVQFNRVSNALDIQKHIRPDRDRKSHHTPRGGRSSICQATALLTPQTNVQAGKRRKDQMRKEAAMMIACLVFIGAGVRSLRPALKVTRRFSSVVVTSNTAQGGDQRGVKDPLYFFYNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFSLPGVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVLQSDLPVGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYPSDSDPSSGPYADIINAHADVYVGAAEFFGGGSKMVPLLR 449          
BLAST of EWM22653.1 vs. NCBI_GenBank
Match: gi|298711263|emb|CBJ26508.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 337.806 bits (865), Expect = 3.273e-110
Identity = 173/329 (52.58%), Postives = 215/329 (65.35%), Query Frame = 0
Query:  125 VKDPLYFFYNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFS----LPGVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAV-----LQSDLP---------VGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYPSDSDPSSGPYADIINAHADVYVGAA 435
            ++  L  FYND++ V +P+GHRFPMEKY   R   Q  L      +P V F  SP +++ DL TTHD+ Y++RY  G  T +E R  GF W+E  V R+LSSVGGTVAA HAV     L+   P            H+AGGTHHAF  R EGFC+FSDIAVAANVALRDYP+ +R+ILIVD D HQGNGNAVLF+    V TFS+HC ANYFSEK+ SD+D+EV+ G GD  YLSLL   LP + +   PDL+F+Q GVD    DRLG+L+LTR GL+ RN  ++    A G   V+T GGGYP D DP+S  +  I+ +H DVY  AA
Sbjct:    5 LRPELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRVNGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGARRTPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVSTFSIHCKANYFSEKEDSDVDIEVEEGAGDEEYLSLLSERLPSLVDHVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTMGGGYPKDLDPASEDFGHIVRSHRDVYEDAA 333          
BLAST of EWM22653.1 vs. NCBI_GenBank
Match: gi|676390385|ref|XP_009038471.1| (hypothetical protein AURANDRAFT_28875 [Aureococcus anophagefferens] >gi|323450842|gb|EGB06721.1| hypothetical protein AURANDRAFT_28875 [Aureococcus anophagefferens])

HSP 1 Score: 314.694 bits (805), Expect = 3.425e-101
Identity = 173/318 (54.40%), Postives = 205/318 (64.47%), Query Frame = 0
Query:  123 RGVKDPLYFFYNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFSLPGVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVLQ-----SDLPVGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYPSDSDPSSGPYADIINAHADVYVGAA 435
            RG+     F+YND++   +PE HRFPM KY   R   Q    +     F PSPL+++ DL TTH R Y +R++ G +TA E R  GF W+   VNR LSS GGTVAA  AV         L V  H+AGGTHHAF  R EGFC+FSDIAVAANV LRDY D V KIL+VD+D HQGNGNA LF+    V TFSMHCD NYFSEK+ASD+DVEV  G GD  YL LL+ Y+ ++    A D+VF QAGVD    DRLGKL LT  GL+RRN  L       G+ +VVT GGGYP + DP+S  Y  I+ AHADVY  AA
Sbjct:   15 RGLATRPVFYYNDVWEFPLPENHRFPMAKYRLVREALQAEGVA---AAFEPSPLASLTDLTTTHCRGYCERFVGGKLTAAENRNIGFPWSPAGVNRALSSTGGTVAAARAVADARRAGGGLRVAGHVAGGTHHAFFDRGEGFCVFSDIAVAANVLLRDYGDVVEKILVVDVDVHQGNGNAKLFEGAPAVTTFSMHCDGNYFSEKRASDVDVEVPAGAGDGEYLRLLKSYVQMLAGGGA-DVVFLQAGVDPSEHDRLGKLRLTADGLRRRNKLLLDAFLRKGASVVVTMGGGYPKNLDPASPEYRAIVEAHADVYREAA 328          
BLAST of EWM22653.1 vs. NCBI_GenBank
Match: gi|551666892|ref|XP_005836207.1| (histone deacetylase HstD [Guillardia theta CCMP2712] >gi|428180359|gb|EKX49227.1| histone deacetylase HstD [Guillardia theta CCMP2712])

HSP 1 Score: 313.153 bits (801), Expect = 6.477e-100
Identity = 163/321 (50.78%), Postives = 208/321 (64.80%), Query Frame = 0
Query:  104 TRRFSSVV-------VTSNTAQGGDQRGVKDPLYFFYNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFSLPGVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVLQSDLPVGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYPSDSDPSS 417
            TR FSS          +S+  +GG  +  +  L  FYNDI+HV++P+GHRFPM KY A R +      + P +   PSP++   D+ TTH   Y++R+L   +T +E R  GF W+ Q V RTLSSVGGTVAA H+     L    H+AGGTHHAF+ R EGFC+FSDIAVAANVALRDY + ++KILIVD D HQGNGNAVLFQD+  VFTFSMHC  N+FSE+Q SDLDVE+     D  Y+SLL  +LPL  +   PDL+F+Q+GVD    D+LG+  LT  G+  R+    Q    +  +LVVT GGGYP D  P+S
Sbjct:   72 TRMFSSHAPLIKDESASSHIKEGG--KNAEKQLRLFYNDIYHVELPQGHRFPMHKYRAVRERIHHA--NKPNIVLQPSPIARTDDIRTTHCHEYLRRFLCNMLTDKENRNIGFPWSPQGVKRTLSSVGGTVAAMHSSTGHKL--AGHIAGGTHHAFRDRGEGFCVFSDIAVAANVALRDY-EHIKKILIVDCDVHQGNGNAVLFQDNPFVFTFSMHCAGNFFSERQKSDLDVEIPVHCKDDDYMSLLHYWLPLAVDRSQPDLIFYQSGVDCLGGDKLGRANLTLDGVTYRDPTGAQLQSDHKIRLVVTMGGGYPRDMSPAS 385          
BLAST of EWM22653.1 vs. NCBI_GenBank
Match: gi|873234546|emb|CEM01890.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 309.686 bits (792), Expect = 2.450e-98
Identity = 168/334 (50.30%), Postives = 212/334 (63.47%), Query Frame = 0
Query:  129 LYFFYNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFSLPGVG-------------FHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVL----------QSDLPVGA-HLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFV---EAYGSKLVVTAGGGYPSDSDPSSGPYADIINAHADVYVGAA 435
            L  +YND+F V +P  H+FPM KY   R + Q+ L                    F PSPL+++ DL TTH  SY++ +  G++   + R  GF    + VNR LSSVGGTVAAT  V           +   P+ A H+AGGTHHAF+ R EGFC FSDIAVAANVALRDY D + +ILIVDLD HQGNGNAVLFQD S VFT S+HC ANYFS K+AS +D+EV  GTGD  YLSLL + LP +     PDL+F+Q+GVD   +DR GKL+L+R GLQ RN  +++     +     +VVT GGGYP D +  S  Y ++++AHADVYVGAA
Sbjct:   52 LSLYYNDLFEVTLPPDHKFPMAKYREVRLRLQRLLGRTTNTNTDSRDQGNAVWASFAPSPLASIEDLHTTHCPSYVRAFCEGSLDPMQYRRIGFPRGHESVNRALSSVGGTVAATRDVCLALRRQRKGQEPTRPLFAGHIAGGTHHAFRDRGEGFCAFSDIAVAANVALRDYADVIERILIVDLDVHQGNGNAVLFQDQSNVFTLSVHCTANYFSPKEASHVDIEVPEGTGDGAYLSLLAKTLPDIVREFRPDLIFYQSGVDCLKTDRFGKLSLSRGGLQTRNRLVYEMAMTDKHTPVPVVVTMGGGYPRDLEVESRSYQEVVSAHADVYVGAA 385          
BLAST of EWM22653.1 vs. NCBI_GenBank
Match: gi|219109741|ref|XP_002176624.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411159|gb|EEC51087.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 300.442 bits (768), Expect = 2.702e-96
Identity = 158/296 (53.38%), Postives = 207/296 (69.93%), Query Frame = 0
Query:  128 PLYFFYNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFSLP-------GVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVLQS------DLPVGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVF-EAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGY 409
            P+Y  YND++ VK+P+ HRFPMEKY   R+  QQ L +LP          F  SPLS++ +L TTHD +Y+QR+L G+   +E R  GF W++ +V+R+LSS GGTVAA  AV+Q+       L  GAH+AGGTHHAF  R EGFC+FSD+AVAANV ++ YP  VR+IL +DLD HQGNGNA+LF+D+  VFTFS+HC ANYFSEKQ SDLD+E+ P   D  YL  L+ +L  +  EA+  DLVFFQAGVD+ A DRLG+++LT  G+QRRN  +++F  +    LV+  GGGY
Sbjct:    1 PIY--YNDVYEVKLPKNHRFPMEKYGRVRQLVQQWLQNLPVDEQGVVNYEFRVSPLSSIDELTTTHDPAYVQRFLTGDQDERELRNVGFPWSQSNVDRSLSSTGGTVAAACAVVQARLRDPYGLHWGAHVAGGTHHAFYDRGEGFCVFSDMAVAANVVMKRYPGVVRRILFLDLDVHQGNGNALLFRDNDSVFTFSLHCSANYFSEKQNSDLDIELPPECSDETYLVTLKHWLNRIEREAEPFDLVFFQAGVDVLAQDRLGRMSLTPVGVQRRNQLVYEFCASQSLPLVICMGGGY 294          
BLAST of EWM22653.1 vs. NCBI_GenBank
Match: gi|922853918|gb|KOO22493.1| (histone deacetylase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 296.204 bits (757), Expect = 1.449e-94
Identity = 148/300 (49.33%), Postives = 195/300 (65.00%), Query Frame = 0
Query:  149 MEKYAAFRRQAQQRLFSLPGVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVLQSDLPV--GAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYPSDSDPSSGPYADIINAHADVYVGAAEFFGGGSKMVP 446
            M+KY  + R+A QR        F+ SPL + +DL   H   Y+ R+L G +T  E R  GF W+ QHVNR LSS GGTVAA HAV ++D       H+AGGTHHAF  R EG+C+F+DIAVAA VALRD+  +V+++L+VD D HQGNG A +F  D RVFT S HC+AN FS ++ SDLDV++ PG GD  YL  L+ +LP +FE   P L FFQAGVD+H SDR+GKL L+ AG+++RN  ++     +G++LVVT GGGYP D D SS  +  ++ +H D Y   A      S+  P
Sbjct:    1 MQKYR-YVREALQRELPSTLATFYESPLVSEKDLTLVHCEGYVSRFLGGQLTRDELRRIGFPWSPQHVNRALSSTGGTVAAAHAVCRADATAIFAGHIAGGTHHAFADRGEGYCVFNDIAVAAAVALRDHAARVQRVLVVDCDVHQGNGTASIFAGDERVFTASFHCEANLFSAREVSDLDVDLPPGVGDEAYLEALQAHLPGLFERVRPQLCFFQAGVDVHESDRIGKLKLSSAGIKKRNALVYAAAARHGARLVVTMGGGYPKDLDESSVHFHRVVQSHMDCYRQCASAHARLSREAP 299          
BLAST of EWM22653.1 vs. NCBI_GenBank
Match: gi|224006361|ref|XP_002292141.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220972660|gb|EED90992.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 296.204 bits (757), Expect = 1.528e-94
Identity = 158/299 (52.84%), Postives = 193/299 (64.55%), Query Frame = 0
Query:  133 YNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFSLPGVG-FHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVLQSD---LPVGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAP-----------------DLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYP 410
            YND++ V MP GHRFPMEKY   R   Q+++     V  F  SPL+TV  LETTHD +YI RYL G +T  E R  GF WN QHVNRTLSSVGGT  +T    Q D   L   AH+AGGTHHAF    EGFCIFSDIAVAANV L++    +R+ILI+DLD HQGNGNA LF  +S V+TFSMHC  NYFS+K+ SDLD+E+  G GD  Y+S L  +L  +   Q P                 DL+F+QAGVDIH  DRLG+L++T  G+ RRN  ++ F +   + LV+T GGGYP
Sbjct:    5 YNDVYEVNMPPGHRFPMEKYREVRLAVQEKIGGFTEVDYFIESPLATVEQLETTHDANYIHRYLTGQMTDAENRNIGFPWNLQHVNRTLSSVGGTYQSTTTQQQHDNMHLCWSAHVAGGTHHAFSDYGEGFCIFSDIAVAANVLLQN---GIRRILIIDLDVHQGNGNAKLFDGNSDVWTFSMHCQGNYFSKKETSDLDIELPIGCGDETYISTLSHWLRRI--EQHPFDEEEGSEDDTKVKKPFDLIFYQAGVDIHEDDRLGRLSITSEGMSRRNSLVYDFADRMRAPLVITMGGGYP 298          
BLAST of EWM22653.1 vs. NCBI_GenBank
Match: gi|1210520714|dbj|GAX20470.1| (hypothetical protein FisN_22Hh038 [Fistulifera solaris])

HSP 1 Score: 287.73 bits (735), Expect = 3.497e-91
Identity = 156/307 (50.81%), Postives = 199/307 (64.82%), Query Frame = 0
Query:  132 FYNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFSLPGVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVLQSDLPVGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYPSDSDPSSGPYADIINAHADVYVGAAEFF 438
            +YND++ V +P  HRFPM KY   R+  Q +L     + F  SPL+T  +L TTH   Y+Q +  G  T QE R  GF W+ + V R  SSVGGTVAA   V        AHLAGGTHHAF  R EGFC+FSD+AVAANV L  YP  +++IL++DLD HQGNGNAVLFQ+DS+VFTFS+HC ANYFS +Q SDLD+E+ P   D  YL  L RY     E Q+ DL+FFQAGVD+   DRLG++ L+  G++RRN  +++F + +   LV+  GGGYP   D     +  I+ AHA VYV A EF+
Sbjct:    2 YYNDVYEVPLPPNHRFPMGKYKRVRKLVQHQLAGSENLQFLVSPLATTEELTTTHAFEYVQNFEKGYQTPQELRNVGFPWSPEGVLRAFSSVGGTVAAACHVCSQPNRWAAHLAGGTHHAFYDRGEGFCVFSDMAVAANVVLERYP-HIQRILLLDLDVHQGNGNAVLFQNDSQVFTFSLHCSANYFSARQRSDLDIELPPNCSDNTYLVTL-RYWLQQLEQQSYDLIFFQAGVDVLKEDRLGRMDLSLEGVRRRNGLVYEFAQRHQIPLVICMGGGYPRSED-----WEPILEAHASVYVDAYEFW 301          
BLAST of EWM22653.1 vs. NCBI_GenBank
Match: gi|1210529835|dbj|GAX11368.1| (hypothetical protein FisN_22Lh038 [Fistulifera solaris])

HSP 1 Score: 285.419 bits (729), Expect = 1.946e-90
Identity = 150/290 (51.72%), Postives = 192/290 (66.21%), Query Frame = 0
Query:  149 MEKYAAFRRQAQQRLFSLPGVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAVLQSDLPVGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYPSDSDPSSGPYADIINAHADVYVGAAEFF 438
            MEKY   R+  QQ+L     + F  SPL+T+ +L TTH   YIQ +  G+ T QE R  GF W+   V R  SSVGGTVAA   V +S     AHLAGGTHHAF  R EGFC+FSD+AVAANV L+ YP  +++IL++DLD HQGNGNAVLFQ++S+VFTFS+HC ANYFS +Q SDLD+E+ P   D  YL  L RY     E Q+ DL+FFQAGVD+   DRLG++ L+  G++RRN  +++F + +   LVV  GGGYP   D     +  I+ AHA VY+ A EF+
Sbjct:    1 MEKYKRVRQLVQQQLAGSDKLQFLVSPLATMEELTTTHAFEYIQNFEKGHQTPQELRNVGFPWSPAGVLRAFSSVGGTVAAACHVCESPNRWAAHLAGGTHHAFYDRGEGFCVFSDMAVAANVVLQRYP-HIQRILLLDLDVHQGNGNAVLFQNNSQVFTFSLHCSANYFSAQQRSDLDIELPPNCSDNTYLVTL-RYWLQQLEQQSFDLIFFQAGVDVLKEDRLGRMDLSLEGVRRRNRLVYEFAKRHQKPLVVCMGGGYPRSED-----WEPILEAHASVYLDAYEFW 283          
The following BLAST results are available for this feature:
BLAST of EWM22653.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103218|gb|EWM22653.1|0.000e+0100.00histone deacetylase superfamily [Nannochloropsis g... [more]
gi|298711263|emb|CBJ26508.1|3.273e-11052.58conserved unknown protein [Ectocarpus siliculosus][more]
gi|676390385|ref|XP_009038471.1|3.425e-10154.40hypothetical protein AURANDRAFT_28875 [Aureococcus... [more]
gi|551666892|ref|XP_005836207.1|6.477e-10050.78histone deacetylase HstD [Guillardia theta CCMP271... [more]
gi|873234546|emb|CEM01890.1|2.450e-9850.30unnamed protein product [Vitrella brassicaformis C... [more]
gi|219109741|ref|XP_002176624.1|2.702e-9653.38predicted protein, partial [Phaeodactylum tricornu... [more]
gi|922853918|gb|KOO22493.1|1.449e-9449.33histone deacetylase [Chrysochromulina sp. CCMP291][more]
gi|224006361|ref|XP_002292141.1|1.528e-9452.84predicted protein, partial [Thalassiosira pseudona... [more]
gi|1210520714|dbj|GAX20470.1|3.497e-9150.81hypothetical protein FisN_22Hh038 [Fistulifera sol... [more]
gi|1210529835|dbj|GAX11368.1|1.946e-9051.72hypothetical protein FisN_22Lh038 [Fistulifera sol... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8064rna8064Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications