EWM29883.1, cds804 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29883.1 vs. NCBI_GenBank
Match: gi|585112465|gb|EWM29883.1| (hypothetical protein Naga_100106g18 [Nannochloropsis gaditana]) HSP 1 Score: 521.931 bits (1343), Expect = 0.000e+0 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
Query: 1 MWFCEKCKWEKANDFKSAAATPPLEAGASASITPTSFPPIACHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQDPNRLAVLVFHRFKTSPSRTKLCGICHDAGGLTVPCPWPECKTQVHARCAHRHGLVHLDASFGHALPLIYCPDHESRRLDPFSLVSLAKPALAGSAGRALVHAMEEKLSGQGTAYEEVDAFGRDLTGIVEELRSSKRPSTDHALAEELQLRLELLKRSSLTATSMLTRKGKEKCDIEK 254
MWFCEKCKWEKANDFKSAAATPPLEAGASASITPTSFPPIACHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQDPNRLAVLVFHRFKTSPSRTKLCGICHDAGGLTVPCPWPECKTQVHARCAHRHGLVHLDASFGHALPLIYCPDHESRRLDPFSLVSLAKPALAGSAGRALVHAMEEKLSGQGTAYEEVDAFGRDLTGIVEELRSSKRPSTDHALAEELQLRLELLKRSSLTATSMLTRKGKEKCDIEK
Sbjct: 1 MWFCEKCKWEKANDFKSAAATPPLEAGASASITPTSFPPIACHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQDPNRLAVLVFHRFKTSPSRTKLCGICHDAGGLTVPCPWPECKTQVHARCAHRHGLVHLDASFGHALPLIYCPDHESRRLDPFSLVSLAKPALAGSAGRALVHAMEEKLSGQGTAYEEVDAFGRDLTGIVEELRSSKRPSTDHALAEELQLRLELLKRSSLTATSMLTRKGKEKCDIEK 254
BLAST of EWM29883.1 vs. NCBI_GenBank
Match: gi|553182797|ref|XP_005853786.1| (hypothetical protein NGA_2069200, partial [Nannochloropsis gaditana CCMP526] >gi|422295275|gb|EKU22574.1| hypothetical protein NGA_2069200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 83.5741 bits (205), Expect = 5.970e-17 Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0
Query: 1 MWFCEKCKWEKANDFKSAAATPPLEAGASASITPTSFP 38
MWFCEKCKWEKANDFKSAAATPPLEAGASASITPTSFP
Sbjct: 77 MWFCEKCKWEKANDFKSAAATPPLEAGASASITPTSFP 114
BLAST of EWM29883.1 vs. NCBI_GenBank
Match: gi|403359825|gb|EJY79569.1| (Protein Jade-3 (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 68.5514 bits (166), Expect = 1.284e-9 Identity = 40/127 (31.50%), Postives = 60/127 (47.24%), Query Frame = 0
Query: 40 IACHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQD--PNRL-AVLVFHRFKTSPSRTKLCGICH--DAGGLTVPCPWPECKTQVHARCAHRHGLVH----LDASFG----HALPLIYCPDHESR 153
I C FC GAMK D +W HV+CV ++P+ +F D N++ VL R++ C +CH A G + C + C H RCA R G++ + G H +PL +C +H +
Sbjct: 366 IKCKFCPDVDGAMKKLVDSDMWAHVICVNWNPDIYFTDKYKNKIEGVLNSKRYELQ------CNMCHRPKAQGCCIQCDFKNCSASYHVRCAVRRGVIEEWDKIQEKAGVEDEHFIPL-FCEEHAEK 485
BLAST of EWM29883.1 vs. NCBI_GenBank
Match: gi|678334882|emb|CDW76823.1| (phd zinc finger-containing protein [Stylonychia lemnae]) HSP 1 Score: 68.5514 bits (166), Expect = 1.546e-9 Identity = 53/208 (25.48%), Postives = 80/208 (38.46%), Query Frame = 0
Query: 2 WFCEKCKWEKAN-DFKSAAATPPLEAGASASITPTSFPPIACHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQDPNR---LAVLVFHRFKTSPSRTKLCGICHDAG-GLTVPCPWPECKTQVHARCAHRHGLVH----LDASFGHA----LPLIYCPDHESRRLDPFSLVSLAKPALAGSAGRALVHAMEEKLSGQGTAYEEVDA 196
W+CE+C N D K I C C G +K D LW H +CV ++P+ +F D + VL RF+ + C CH G G + C + C H RCA R GL+ ++ G A +P ++C DHE + + F K + A +EK + + Y E+ +
Sbjct: 331 WYCERCSVLLRNRDMKCTE--------------------IKCFLCPDIDGVLK-QIDNELWAHAICVNWNPDIYFTDAKKNKVEGVLNKQRFELN------CQKCHKKGKGTCIQCDYKNCSRSYHVRCAVRRGLIQEWEKMEDKAGEAQDNFIP-VFCEDHEKKGYEKFK-----KGGKQEIQSIQMTQAFKEKAAERLNKYREIQS 505
BLAST of EWM29883.1 vs. NCBI_GenBank
Match: gi|685833163|emb|CEF68084.1| (Zinc finger, PHD-type domain and Zinc finger, FYVE/PHD-type domain and Zinc finger, RING/FYVE/PHD-type domain and Zinc finger, PHD-finger domain-containing protein [Strongyloides ratti]) HSP 1 Score: 68.1662 bits (165), Expect = 1.954e-9 Identity = 49/165 (29.70%), Postives = 67/165 (40.61%), Query Frame = 0
Query: 2 WFCEKCKWEKANDFKSAAATPPLEAGASASITPTSFPPIA---CHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQDPNRLAVLVFHRFKTSPSRTKLCGICHDAGGLTVPCPWPECKTQVHARCAHRHGL-VHLDASFGHALPLIYCPDHESRRLDPFSLVS 162
WFCEKC+ N+ PIA C FC GAMK + R W HV+C + E +F+DP+ + + RT LC IC G C P C HA CA GL + +D + + YC H +R +D + +S
Sbjct: 218 WFCEKCE----NN------------------------PIASRKCVFCPYKGGAMKQTTCGR-WAHVICTMWLGEVYFKDPDIMKNISGVDRCLRDRRTLLCFICKKKYGACTQCSSPSCALAYHATCAAFAGLYIKVDETGDDIKRISYCVKHTNRNIDSDNRIS 353
BLAST of EWM29883.1 vs. NCBI_GenBank
Match: gi|661890566|emb|CDP06063.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 67.0106 bits (162), Expect = 3.192e-9 Identity = 46/133 (34.59%), Postives = 54/133 (40.60%), Query Frame = 0
Query: 2 WFCEKCKWEKANDFKSAAATPPLEAGASASITPTSFPPIACHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQDPN-RLAVLVFHRFKTSPSR--TKLCGICHDAGGLTVPCPWPECKTQVHARCAHRHGL 131
WFC KC A+ P S I P S C C T GA+K + DK W H+VC F PEAFF DP R + V P R + C IC G + C P C H CA + L
Sbjct: 185 WFCAKC----------LASQSPYRTNTSNHIKPFS-----CCLCPVTGGALKPTTDKGKWAHLVCALFVPEAFFSDPEGREGIDV----TKVPDRRWNQKCYICKSKNGCAIDCSEPRCPLAFHVTCALKENL 298
BLAST of EWM29883.1 vs. NCBI_GenBank
Match: gi|697142795|ref|XP_009625501.1| (PREDICTED: protein Jade-1 [Nicotiana tomentosiformis] >gi|1025067141|ref|XP_016451094.1| PREDICTED: protein Jade-1-like [Nicotiana tabacum]) HSP 1 Score: 65.4698 bits (158), Expect = 8.015e-9 Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 0
Query: 39 PIACHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQDPNRLAVLVFHRFKTSPSR--TKLCGICHDAGGLTVPCPWPECKTQVHARCAHRHGL 131
PI C+ C +TSGA+K + ++ W HVVC F PE FF DP + F + P R + C IC G + C P+C H C ++ L
Sbjct: 179 PITCYLCPETSGALKPTVNEGKWAHVVCALFVPEVFFVDPEGREGIDFSKV---PKRRWEQKCYICKSRNGCAIDCSEPKCPLSFHVTCGLKNEL 270
BLAST of EWM29883.1 vs. NCBI_GenBank
Match: gi|669315331|gb|KFD58779.1| (hypothetical protein M513_00472 [Trichuris suis] >gi|669331896|gb|KFD72064.1| hypothetical protein M514_00472 [Trichuris suis]) HSP 1 Score: 64.6994 bits (156), Expect = 2.774e-8 Identity = 37/113 (32.74%), Postives = 52/113 (46.02%), Query Frame = 0
Query: 41 ACHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQDPNRLAVLVFHRFKTSPSRTKLCGICHDAGGLTVPCPWPECKTQVHARCAHRHGLVHLDASFGHALPL-IYCPDHES 152
AC FC + GAMK + ++W HV C + PE F D +++ L F + K + +C IC G+T+ C C + HA CA G + L YCP H S
Sbjct: 215 ACGFCSRHFGAMKFDQTLQMWYHVSCALWLPEVRFHDWSKMRGLYFVKPKWN---MYVCSICRRMNGMTIQCKAKSCMVRYHASCAQEAGYKMDYVLLDKNVQLKSYCPQHRS 324
BLAST of EWM29883.1 vs. NCBI_GenBank
Match: gi|674590203|emb|CDS30868.1| (PHD finger protein rhinoceros [Hymenolepis microstoma]) HSP 1 Score: 63.929 bits (154), Expect = 4.367e-8 Identity = 34/114 (29.82%), Postives = 50/114 (43.86%), Query Frame = 0
Query: 40 IACHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQDPNRLAVLVFHRFKTSPSRTKLCGICHDAGGLTVPCPWPECKTQVHARCAHRHGLV-HLDASFGHALPLIYCPDHES 152
I C C GAMK +D W HV C + P F+DP + ++ +R LC +C G+T+ C C+ + H CA+ GLV + + H +C H S
Sbjct: 204 IKCDLCPFRGGAMKPFKDSTDWAHVSCALWIPAIMFEDPVNMELITGRNAIPLEARVSLCDLCRIPQGITIKCCINGCRGRFHVTCAYDQGLVMDIHSVDAHVRFFAFCRKHSS 317
BLAST of EWM29883.1 vs. NCBI_GenBank
Match: gi|196012423|ref|XP_002116074.1| (hypothetical protein TRIADDRAFT_30335 [Trichoplax adhaerens] >gi|190581397|gb|EDV21474.1| hypothetical protein TRIADDRAFT_30335, partial [Trichoplax adhaerens]) HSP 1 Score: 62.3882 bits (150), Expect = 7.240e-8 Identity = 31/94 (32.98%), Postives = 45/94 (47.87%), Query Frame = 0
Query: 41 ACHFCGQTSGAMKGSRDKRLWGHVVCVRFDPEAFFQDPNRLAVLVFHRFKTSPSRTKLCGICHDAGGLTVPCPWPECKTQVHARCAHRHGLVHL 134
+C FC SGAMK ++D WGHV C + PE +P ++ + + T LC +C + G + C P C H CA + GLV +
Sbjct: 184 SCIFCPHKSGAMKKTQDGSRWGHVSCALWIPETRMGNPEKMQPITRVNRIPASRWTLLCCLCQEKYGACIQCSVPSCTVSFHVTCAIKKGLVMV 277 The following BLAST results are available for this feature:
BLAST of EWM29883.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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