EWM22657.1, cds8036 (CDS) Nannochloropsis gaditana

Overview
NameEWM22657.1
Unique Namecds8036
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:461798..461824 +
Alignment locationKK037247.1:461990..462691 +
Alignment locationKK037247.1:463208..463681 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22657.1
ProductCBF1-interacting co-repressor CIR, N-terminal domain protein
Orig transcript idgnl|cribi|Naga_100023g47.3973.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:461798..461824 +
KK037247.1supercontigKK037247.1:461990..462691 +
KK037247.1supercontigKK037247.1:463208..463681 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR022209CWC25
IPR019339CIR_N_dom
Homology
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|585103222|gb|EWM22657.1| (CBF1-interacting co-repressor CIR, N-terminal domain protein [Nannochloropsis gaditana])

HSP 1 Score: 797.349 bits (2058), Expect = 0.000e+0
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0
Query:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYGGGSNGANGNASGDGRARALGPDPEVLAAKEKARLEEERERRERLRRKPLTEKEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRNRGGEAGFL 400
            MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYGGGSNGANGNASGDGRARALGPDPEVLAAKEKARLEEERERRERLRRKPLTEKEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRNRGGEAGFL
Sbjct:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYGGGSNGANGNASGDGRARALGPDPEVLAAKEKARLEEERERRERLRRKPLTEKEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRNRGGEAGFL 400          
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|673039453|ref|XP_008873687.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574470468|gb|ETV97478.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 202.986 bits (515), Expect = 4.365e-57
Identity = 155/431 (35.96%), Postives = 231/431 (53.60%), Query Frame = 0
Query:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNS-VSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKK------------------------NAKREKKRARKEAKKAKK------EKKRQKDSMD-----SAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYGGGSNGA-NGNASGDGRARALGPDPEVLAAKEKARLEEERERRERLRR-KPLTE-KEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRN 392
            MSL FLAKK+W+ +NL NVEKVWKAEQKAA EEK++AE++K + EERQL+EL+ELQ  A     N T ++DWMYEGPMA  Q  ++  E+YLLGKE   K +D+E+K++ +QPG LY+ S     ND F+RL+EDP++ IK+ +   +  ++KNP+KM RI++++E EL  +K +K                        N     K +R+      +      ++ R   S D     SA     +R  D G +GS    S   S   S    E+  R Q + +   G G  GA N     D    +LGP  + L   ++ R  EE E++ER +R +  T+   KA+R +  RL  ++ + +RR R    R ++ E  +R       +G  S  +  P FL+ L    Y+  ++++EER+ R +H  QRN
Sbjct:   24 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALEEKKLAEWKKNVEEERQLKELRELQAKASGTKANTTERVDWMYEGPMAASQ-REKTAEEYLLGKEYEEKPEDNELKKLSSQPGSLYMQSGPGTANDAFSRLNEDPMMFIKKQQKATQLSIMKNPMKMKRIKEKVEQELKERKAEKKAKKEAKKAKKASKKDKKRRGSDDNDASSSKHSRRSTSADHRHHVDHTDRLRHHSSHDTKRDRSASPPRSYRSGD-GHRGSPRGRSRDRSPGRSRPRHESPTR-QDHPVPLKGYGVLGAENARKCRDIDTSSLGPSRKFLDQAKEKRQREEDEKQERFKRARAATDVATKADREA--RLQAMLEDAKRRERALDARLRKSESDKRRENDG--DGEASATQQNPTFLKDLHDAAYVHSNDSMEERLQRNKHYIQRN 447          
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|673039451|ref|XP_008873686.1| (hypothetical protein H310_09402 [Aphanomyces invadans] >gi|574470467|gb|ETV97477.1| hypothetical protein H310_09402 [Aphanomyces invadans])

HSP 1 Score: 192.971 bits (489), Expect = 4.246e-53
Identity = 156/448 (34.82%), Postives = 232/448 (51.79%), Query Frame = 0
Query:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNS-VSAKNDLFTRLHEDPLLLIKQNE------------LKKRE-----DVVKNPVKMARIRQQLEAELARKKEKK------------------------NAKREKKRARKEAKKAKK------EKKRQKDSMD-----SAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYGGGSNGA-NGNASGDGRARALGPDPEVLAAKEKARLEEERERRERLRR-KPLTE-KEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRN 392
            MSL FLAKK+W+ +NL NVEKVWKAEQKAA EEK++AE++K + EERQL+EL+ELQ  A     N T ++DWMYEGPMA  Q  ++  E+YLLGKE   K +D+E+K++ +QPG LY+ S     ND F+RL+EDP++ IK                +K++      ++KNP+KM RI++++E EL  +K +K                        N     K +R+      +      ++ R   S D     SA     +R  D G +GS    S   S   S    E+  R Q + +   G G  GA N     D    +LGP  + L   ++ R  EE E++ER +R +  T+   KA+R +  RL  ++ + +RR R    R ++ E  +R       +G  S  +  P FL+ L    Y+  ++++EER+ R +H  QRN
Sbjct:   24 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALEEKKLAEWKKNVEEERQLKELRELQAKASGTKANTTERVDWMYEGPMAASQ-REKTAEEYLLGKEYEEKPEDNELKKLSSQPGSLYMQSGPGTANDAFSRLNEDPMMFIKFGHHDHAPFPSHTPACRKQQKATQLSIMKNPMKMKRIKEKVEQELKERKAEKKAKKEAKKAKKASKKDKKRRGSDDNDASSSKHSRRSTSADHRHHVDHTDRLRHHSSHDTKRDRSASPPRSYRSGD-GHRGSPRGRSRDRSPGRSRPRHESPTR-QDHPVPLKGYGVLGAENARKCRDIDTSSLGPSRKFLDQAKEKRQREEDEKQERFKRARAATDVATKADREA--RLQAMLEDAKRRERALDARLRKSESDKRRENDG--DGEASATQQNPTFLKDLHDAAYVHSNDSMEERLQRNKHYIQRN 464          
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|1173934802|gb|OQR86035.1| (pre-mRNA-splicing factor CWC25-like protein [Achlya hypogyna])

HSP 1 Score: 176.792 bits (447), Expect = 6.473e-48
Identity = 143/403 (35.48%), Postives = 214/403 (53.10%), Query Frame = 0
Query:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSV-SAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYG--GGSNGANGNA---SGDGRARALGPDPEVL-----AAKEKARLEEERERRERLRRKPLTEKEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRN 392
            MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE ++ E RK + EERQL+EL+ELQ        + T ++DWMYEGPMA  Q   +  E YLLGKE   + + +++K++ + PG LY+++  SA ND F+RL+EDP+++IK+ +   +  V+KNP KM +++ ++E EL+ +K  K AK+E K+A+K  K  K+ +      +  +     HR     +  S A              A++  +     L+ YG  GG N  + N+     D    +LGP  ++L         +A   EER R+ R+  +P T  ++ ERL  M  D    E     R+        +E      +T            P FLQ+L    Y+G  ET+ ER++R +H  QRN
Sbjct:    1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELRKNLEEERQLKELRELQAKTTGKKLDTTQRVDWMYEGPMAASQT-AKTAEDYLLGKEYKPEAEQNQLKQLSSTPGSLYMSAAPSAVNDSFSRLNEDPMMMIKRQQKAAQIAVLKNPAKMKKLKDKVEKELSERKIAKLAKKEAKKAKKAKKDKKRSRSPPIKFLSPS-----HRSPSPKRARSTA----------VNDAADSHTKAPPPPLKGYGVIGGENAVSANSVRKCKDVDTSSLGPSRKLLEMAREKKAAEAAALEERLRKARVMTQP-TAADREERLREMADDARRREVLLEERLRAKEAARAQEEAAPEPST-----------NPTFLQELNHAAYIGSSETMSERLNRNKHYIQRN 375          
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|813126913|ref|XP_012197177.1| (hypothetical protein SPRG_03197 [Saprolegnia parasitica CBS 223.65] >gi|641538147|gb|KDO31981.1| hypothetical protein SPRG_03197 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 174.866 bits (442), Expect = 4.707e-46
Identity = 89/172 (51.74%), Postives = 127/172 (73.84%), Query Frame = 0
Query:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQ--VSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSV-SAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELA 169
            MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE ++ E RK + EERQL+EL+E+Q  +S G VD  QT ++DWMYEGPMA  Q  ++  E YLLGKE T   +++++K++  QPG LY+++  SA ND F+RL+EDP+++IK+ +   +  V+KNP KM  ++ ++E EL+
Sbjct:    1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELRKNLEEERQLKELREMQAKMSGGKVD--QTQRVDWMYEGPMAASQT-ERTAEDYLLGKEYTPAPEENQLKQLAAQPGSLYMSAAPSAVNDTFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKHLKDKVEQELS 169          
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|669142520|ref|XP_008606822.1| (hypothetical protein SDRG_02986 [Saprolegnia diclina VS20] >gi|530741308|gb|EQC39550.1| hypothetical protein SDRG_02986 [Saprolegnia diclina VS20])

HSP 1 Score: 169.859 bits (429), Expect = 3.489e-44
Identity = 87/172 (50.58%), Postives = 126/172 (73.26%), Query Frame = 0
Query:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQ--VSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSV-SAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELA 169
            MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE ++ E RK + EERQL+EL+E+Q  +S G VD  QT ++DWMY+GPMA  Q  ++  E YLLGKE     +++++K++  QPG LY+++  SA ND F+RL+EDP+++IK+ +   +  V+KNP KM  ++ ++E EL+
Sbjct:    1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELRKNLEEERQLKELREMQAKMSGGKVD--QTQRVDWMYDGPMAASQT-ERTAEDYLLGKEYKPAPEENQLKQLAAQPGSLYMSAAPSAVNDSFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKHLKDKVEQELS 169          
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|1173927862|gb|OQR81653.1| (pre-mRNA-splicing factor CWC25 [Thraustotheca clavata])

HSP 1 Score: 167.162 bits (422), Expect = 5.540e-43
Identity = 84/161 (52.17%), Postives = 115/161 (71.43%), Query Frame = 0
Query:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYL-NSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARI 160
            MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE+++ E RK I EERQL+EL+ELQ        NQT ++DWMYEGPMA  Q  ++  E YLLGKE   + + +E+K++  +PG LY+ N+ S   D F+RL+EDP+++IK+ +   +  V+KNP KM R+
Sbjct:    1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEEQKLLELRKNIEEERQLKELRELQAKTTGDKVNQTQRVDWMYEGPMAASQA-ERTAEDYLLGKEYKPEAEKNELKQLSERPGSLYMGNATSKITDTFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKRL 160          
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|301122799|ref|XP_002909126.1| (pre-mRNA-splicing factor CWC25-like protein [Phytophthora infestans T30-4] >gi|262099888|gb|EEY57940.1| pre-mRNA-splicing factor CWC25-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 152.14 bits (383), Expect = 1.162e-38
Identity = 121/310 (39.03%), Postives = 171/310 (55.16%), Query Frame = 0
Query:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTA-KLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQ-----DSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASL--------HREQDKGKKGSRAQESD---GGSTESSGSEAEAKERKQ-------RYGLQTYGGGSNGANGNASGDGRARALGPDPEVLAAKEKAR 286
            MSL FL+KK+W+  NL+NVEKVW AEQK A EE+++AE RK I EERQLQEL++LQ + G  DK+    +LDWMYEGP A     ++  E+YLLGKE   +E+     D ++        ++   S    ND F RL+EDP++LI++ +   RE V+KNPVKM RI+ +++     KK +K AK+  K+ +K A+K +K + ++K   DS   AS         +R +D   K  R    D   G S   S S     E ++       +YGL +  G        AS D    +LGP+ + L   EKAR
Sbjct:    1 MSLAFLSKKSWHTANLRNVEKVWIAEQKHAAEEQKVAELRKNIEEERQLQELRQLQAARG--DKSAAMERLDWMYEGPSAA---REKTAEEYLLGKEYNGEEEKAAKGDVDLSTTTKYGSLVLTKSALPANDAFQRLNEDPMMLIRKRQQAAREQVLKNPVKMKRIKDEVDRLKEDKKARKKAKKAVKKEKKHARKEEKRRLKRKHVYDSGSEASADENEERADYRHKDDLSKRQRGHGRDRERGRSHSRSKSPRSTSESRRKLLDPDGKYGLISKAGAV------ASRDIDTSSLGPNAKYL---EKAR 296          
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|301089165|ref|XP_002894915.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262105081|gb|EEY63133.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 152.14 bits (383), Expect = 1.344e-38
Identity = 121/310 (39.03%), Postives = 171/310 (55.16%), Query Frame = 0
Query:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTA-KLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQ-----DSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASL--------HREQDKGKKGSRAQESD---GGSTESSGSEAEAKERKQ-------RYGLQTYGGGSNGANGNASGDGRARALGPDPEVLAAKEKAR 286
            MSL FL+KK+W+  NL+NVEKVW AEQK A EE+++AE RK I EERQLQEL++LQ + G  DK+    +LDWMYEGP A+    ++  E+YLLGKE   +E+     D  +        ++   S    ND F RL+EDP++LI++ +   RE V+KNPVKM RI+ +++     KK +K AK+  K+ +K A+K +K + ++K   DS   AS         +R +D   K  R    D   G S   S S     E ++       +YGL +  G        AS D    +LGP+ + L   EKAR
Sbjct:    1 MSLAFLSKKSWHTANLRNVEKVWIAEQKHAAEEQKVAELRKNIEEERQLQELRQLQAARG--DKSAAMERLDWMYEGPSAS---REKTAEEYLLGKEYNGEEEKAAKGDVNLSTTTKYGSLVLTKSALPANDAFQRLNEDPMMLIRKRQQAAREQVLKNPVKMKRIKDEVDRLKEDKKARKKAKKAVKKEKKHARKEEKRRLKRKHVYDSGSEASADENEERADYRHKDDLSKRQRGHGRDRERGRSHSRSKSPRSTSESRRKLLDPDGKYGLISKAGAV------ASRDIDTSSLGPNAKYL---EKAR 296          
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|695426734|ref|XP_009529495.1| (hypothetical protein PHYSODRAFT_509106 [Phytophthora sojae] >gi|348675928|gb|EGZ15746.1| hypothetical protein PHYSODRAFT_509106 [Phytophthora sojae])

HSP 1 Score: 150.599 bits (379), Expect = 8.382e-38
Identity = 138/434 (31.80%), Postives = 220/434 (50.69%), Query Frame = 0
Query:    1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTA---KLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQ-----DSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLE--AELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASLHREQDKGKKGSRAQESDGG----------STESSGSEAEAKERKQRYGLQTYGGGSNGANGNASGDGRARALGPDPEVLA-------------AKEKARLEEERERRERLRRKPLTEKEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAE-REAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRNRGGEAGFL 400
            MSL FL+KK+W+  NL+NVEKVW AEQK A EEK++AE RK I EERQLQEL++LQ + G    N+ A   +LDWMYEGP A     ++  E+YLLGKE    ++     D ++        +    S    ND F RL+EDP++LI++ +   RE V+KNPVKM +I+ Q+E   E  + ++K     +K++ +   ++ ++ KK++K   D ++A+ L  ++D+ K   R  +   G           + S  S  +  + + +YGL +  G         S D    +LGP+ + +A              ++  +    RE R       LT++EK      M    + + +QR   + K   ++K+E + RE   T+ N         PEFL++L    Y+ G+  + +R+ R  H  QR +   + FL
Sbjct:    1 MSLAFLSKKSWHTANLRNVEKVWIAEQKHAAEEKKVAELRKNIEEERQLQELRQLQAAQG----NKAAAVERLDWMYEGPSAA---REKTAEEYLLGKEYKGGDEKAAKGDVDLSATTKYGSLALTKSALPANDAFQRLNEDPMMLIRKRQQAAREQVLKNPVKMKKIKDQVERLKEDKKARKKAKKAAKKEKKQARKEEKRRLKKKRKHGEDDSDASDLSGDEDEEKADYRRSKHHRGQGRDRERGRSPSRSYKSRRKPLDTEGKYGLISKAGAVE------SKDVDKTSLGPNAKYVAKAREAKRLEEEERRRKLGKTSSHRESR------ALTDEEKQRMAQQM----VEDAKQRDEYIAKRASRKKDELDKREHEATSSN---------PEFLRELHSAAYLDGESNMGDRLRRNAHYIQR-KADSSNFL 401          
The following BLAST results are available for this feature:
BLAST of EWM22657.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103222|gb|EWM22657.1|0.000e+0100.00CBF1-interacting co-repressor CIR, N-terminal doma... [more]
gi|673039453|ref|XP_008873687.1|4.365e-5735.96hypothetical protein, variant [Aphanomyces invadan... [more]
gi|673039451|ref|XP_008873686.1|4.246e-5334.82hypothetical protein H310_09402 [Aphanomyces invad... [more]
gi|1173934802|gb|OQR86035.1|6.473e-4835.48pre-mRNA-splicing factor CWC25-like protein [Achly... [more]
gi|813126913|ref|XP_012197177.1|4.707e-4651.74hypothetical protein SPRG_03197 [Saprolegnia paras... [more]
gi|669142520|ref|XP_008606822.1|3.489e-4450.58hypothetical protein SDRG_02986 [Saprolegnia dicli... [more]
gi|1173927862|gb|OQR81653.1|5.540e-4352.17pre-mRNA-splicing factor CWC25 [Thraustotheca clav... [more]
gi|301122799|ref|XP_002909126.1|1.162e-3839.03pre-mRNA-splicing factor CWC25-like protein [Phyto... [more]
gi|301089165|ref|XP_002894915.1|1.344e-3839.03conserved hypothetical protein [Phytophthora infes... [more]
gi|695426734|ref|XP_009529495.1|8.382e-3831.80hypothetical protein PHYSODRAFT_509106 [Phytophtho... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8058rna8058Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications