EWM22657.1, cds8036 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|585103222|gb|EWM22657.1| (CBF1-interacting co-repressor CIR, N-terminal domain protein [Nannochloropsis gaditana]) HSP 1 Score: 797.349 bits (2058), Expect = 0.000e+0 Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0
Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYGGGSNGANGNASGDGRARALGPDPEVLAAKEKARLEEERERRERLRRKPLTEKEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRNRGGEAGFL 400
MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYGGGSNGANGNASGDGRARALGPDPEVLAAKEKARLEEERERRERLRRKPLTEKEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRNRGGEAGFL
Sbjct: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYGGGSNGANGNASGDGRARALGPDPEVLAAKEKARLEEERERRERLRRKPLTEKEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRNRGGEAGFL 400
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|673039453|ref|XP_008873687.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574470468|gb|ETV97478.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 202.986 bits (515), Expect = 4.365e-57 Identity = 155/431 (35.96%), Postives = 231/431 (53.60%), Query Frame = 0
Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNS-VSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKK------------------------NAKREKKRARKEAKKAKK------EKKRQKDSMD-----SAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYGGGSNGA-NGNASGDGRARALGPDPEVLAAKEKARLEEERERRERLRR-KPLTE-KEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRN 392
MSL FLAKK+W+ +NL NVEKVWKAEQKAA EEK++AE++K + EERQL+EL+ELQ A N T ++DWMYEGPMA Q ++ E+YLLGKE K +D+E+K++ +QPG LY+ S ND F+RL+EDP++ IK+ + + ++KNP+KM RI++++E EL +K +K N K +R+ + ++ R S D SA +R D G +GS S S S E+ R Q + + G G GA N D +LGP + L ++ R EE E++ER +R + T+ KA+R + RL ++ + +RR R R ++ E +R +G S + P FL+ L Y+ ++++EER+ R +H QRN
Sbjct: 24 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALEEKKLAEWKKNVEEERQLKELRELQAKASGTKANTTERVDWMYEGPMAASQ-REKTAEEYLLGKEYEEKPEDNELKKLSSQPGSLYMQSGPGTANDAFSRLNEDPMMFIKKQQKATQLSIMKNPMKMKRIKEKVEQELKERKAEKKAKKEAKKAKKASKKDKKRRGSDDNDASSSKHSRRSTSADHRHHVDHTDRLRHHSSHDTKRDRSASPPRSYRSGD-GHRGSPRGRSRDRSPGRSRPRHESPTR-QDHPVPLKGYGVLGAENARKCRDIDTSSLGPSRKFLDQAKEKRQREEDEKQERFKRARAATDVATKADREA--RLQAMLEDAKRRERALDARLRKSESDKRRENDG--DGEASATQQNPTFLKDLHDAAYVHSNDSMEERLQRNKHYIQRN 447
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|673039451|ref|XP_008873686.1| (hypothetical protein H310_09402 [Aphanomyces invadans] >gi|574470467|gb|ETV97477.1| hypothetical protein H310_09402 [Aphanomyces invadans]) HSP 1 Score: 192.971 bits (489), Expect = 4.246e-53 Identity = 156/448 (34.82%), Postives = 232/448 (51.79%), Query Frame = 0
Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNS-VSAKNDLFTRLHEDPLLLIKQNE------------LKKRE-----DVVKNPVKMARIRQQLEAELARKKEKK------------------------NAKREKKRARKEAKKAKK------EKKRQKDSMD-----SAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYGGGSNGA-NGNASGDGRARALGPDPEVLAAKEKARLEEERERRERLRR-KPLTE-KEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRN 392
MSL FLAKK+W+ +NL NVEKVWKAEQKAA EEK++AE++K + EERQL+EL+ELQ A N T ++DWMYEGPMA Q ++ E+YLLGKE K +D+E+K++ +QPG LY+ S ND F+RL+EDP++ IK +K++ ++KNP+KM RI++++E EL +K +K N K +R+ + ++ R S D SA +R D G +GS S S S E+ R Q + + G G GA N D +LGP + L ++ R EE E++ER +R + T+ KA+R + RL ++ + +RR R R ++ E +R +G S + P FL+ L Y+ ++++EER+ R +H QRN
Sbjct: 24 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALEEKKLAEWKKNVEEERQLKELRELQAKASGTKANTTERVDWMYEGPMAASQ-REKTAEEYLLGKEYEEKPEDNELKKLSSQPGSLYMQSGPGTANDAFSRLNEDPMMFIKFGHHDHAPFPSHTPACRKQQKATQLSIMKNPMKMKRIKEKVEQELKERKAEKKAKKEAKKAKKASKKDKKRRGSDDNDASSSKHSRRSTSADHRHHVDHTDRLRHHSSHDTKRDRSASPPRSYRSGD-GHRGSPRGRSRDRSPGRSRPRHESPTR-QDHPVPLKGYGVLGAENARKCRDIDTSSLGPSRKFLDQAKEKRQREEDEKQERFKRARAATDVATKADREA--RLQAMLEDAKRRERALDARLRKSESDKRRENDG--DGEASATQQNPTFLKDLHDAAYVHSNDSMEERLQRNKHYIQRN 464
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|1173934802|gb|OQR86035.1| (pre-mRNA-splicing factor CWC25-like protein [Achlya hypogyna]) HSP 1 Score: 176.792 bits (447), Expect = 6.473e-48 Identity = 143/403 (35.48%), Postives = 214/403 (53.10%), Query Frame = 0
Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSV-SAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASLHREQDKGKKGSRAQESDGGSTESSGSEAEAKERKQRYGLQTYG--GGSNGANGNA---SGDGRARALGPDPEVL-----AAKEKARLEEERERRERLRRKPLTEKEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAEREAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRN 392
MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE ++ E RK + EERQL+EL+ELQ + T ++DWMYEGPMA Q + E YLLGKE + + +++K++ + PG LY+++ SA ND F+RL+EDP+++IK+ + + V+KNP KM +++ ++E EL+ +K K AK+E K+A+K K K+ + + + HR + S A A++ + L+ YG GG N + N+ D +LGP ++L +A EER R+ R+ +P T ++ ERL M D E R+ +E +T P FLQ+L Y+G ET+ ER++R +H QRN
Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELRKNLEEERQLKELRELQAKTTGKKLDTTQRVDWMYEGPMAASQT-AKTAEDYLLGKEYKPEAEQNQLKQLSSTPGSLYMSAAPSAVNDSFSRLNEDPMMMIKRQQKAAQIAVLKNPAKMKKLKDKVEKELSERKIAKLAKKEAKKAKKAKKDKKRSRSPPIKFLSPS-----HRSPSPKRARSTA----------VNDAADSHTKAPPPPLKGYGVIGGENAVSANSVRKCKDVDTSSLGPSRKLLEMAREKKAAEAAALEERLRKARVMTQP-TAADREERLREMADDARRREVLLEERLRAKEAARAQEEAAPEPST-----------NPTFLQELNHAAYIGSSETMSERLNRNKHYIQRN 375
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|813126913|ref|XP_012197177.1| (hypothetical protein SPRG_03197 [Saprolegnia parasitica CBS 223.65] >gi|641538147|gb|KDO31981.1| hypothetical protein SPRG_03197 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 174.866 bits (442), Expect = 4.707e-46 Identity = 89/172 (51.74%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQ--VSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSV-SAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELA 169
MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE ++ E RK + EERQL+EL+E+Q +S G VD QT ++DWMYEGPMA Q ++ E YLLGKE T +++++K++ QPG LY+++ SA ND F+RL+EDP+++IK+ + + V+KNP KM ++ ++E EL+
Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELRKNLEEERQLKELREMQAKMSGGKVD--QTQRVDWMYEGPMAASQT-ERTAEDYLLGKEYTPAPEENQLKQLAAQPGSLYMSAAPSAVNDTFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKHLKDKVEQELS 169
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|669142520|ref|XP_008606822.1| (hypothetical protein SDRG_02986 [Saprolegnia diclina VS20] >gi|530741308|gb|EQC39550.1| hypothetical protein SDRG_02986 [Saprolegnia diclina VS20]) HSP 1 Score: 169.859 bits (429), Expect = 3.489e-44 Identity = 87/172 (50.58%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQ--VSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSV-SAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELA 169
MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE ++ E RK + EERQL+EL+E+Q +S G VD QT ++DWMY+GPMA Q ++ E YLLGKE +++++K++ QPG LY+++ SA ND F+RL+EDP+++IK+ + + V+KNP KM ++ ++E EL+
Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELRKNLEEERQLKELREMQAKMSGGKVD--QTQRVDWMYDGPMAASQT-ERTAEDYLLGKEYKPAPEENQLKQLAAQPGSLYMSAAPSAVNDSFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKHLKDKVEQELS 169
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|1173927862|gb|OQR81653.1| (pre-mRNA-splicing factor CWC25 [Thraustotheca clavata]) HSP 1 Score: 167.162 bits (422), Expect = 5.540e-43 Identity = 84/161 (52.17%), Postives = 115/161 (71.43%), Query Frame = 0
Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYL-NSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARI 160
MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE+++ E RK I EERQL+EL+ELQ NQT ++DWMYEGPMA Q ++ E YLLGKE + + +E+K++ +PG LY+ N+ S D F+RL+EDP+++IK+ + + V+KNP KM R+
Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEEQKLLELRKNIEEERQLKELRELQAKTTGDKVNQTQRVDWMYEGPMAASQA-ERTAEDYLLGKEYKPEAEKNELKQLSERPGSLYMGNATSKITDTFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKRL 160
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|301122799|ref|XP_002909126.1| (pre-mRNA-splicing factor CWC25-like protein [Phytophthora infestans T30-4] >gi|262099888|gb|EEY57940.1| pre-mRNA-splicing factor CWC25-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 152.14 bits (383), Expect = 1.162e-38 Identity = 121/310 (39.03%), Postives = 171/310 (55.16%), Query Frame = 0
Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTA-KLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQ-----DSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASL--------HREQDKGKKGSRAQESD---GGSTESSGSEAEAKERKQ-------RYGLQTYGGGSNGANGNASGDGRARALGPDPEVLAAKEKAR 286
MSL FL+KK+W+ NL+NVEKVW AEQK A EE+++AE RK I EERQLQEL++LQ + G DK+ +LDWMYEGP A ++ E+YLLGKE +E+ D ++ ++ S ND F RL+EDP++LI++ + RE V+KNPVKM RI+ +++ KK +K AK+ K+ +K A+K +K + ++K DS AS +R +D K R D G S S S E ++ +YGL + G AS D +LGP+ + L EKAR
Sbjct: 1 MSLAFLSKKSWHTANLRNVEKVWIAEQKHAAEEQKVAELRKNIEEERQLQELRQLQAARG--DKSAAMERLDWMYEGPSAA---REKTAEEYLLGKEYNGEEEKAAKGDVDLSTTTKYGSLVLTKSALPANDAFQRLNEDPMMLIRKRQQAAREQVLKNPVKMKRIKDEVDRLKEDKKARKKAKKAVKKEKKHARKEEKRRLKRKHVYDSGSEASADENEERADYRHKDDLSKRQRGHGRDRERGRSHSRSKSPRSTSESRRKLLDPDGKYGLISKAGAV------ASRDIDTSSLGPNAKYL---EKAR 296
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|301089165|ref|XP_002894915.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262105081|gb|EEY63133.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 152.14 bits (383), Expect = 1.344e-38 Identity = 121/310 (39.03%), Postives = 171/310 (55.16%), Query Frame = 0
Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTA-KLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQ-----DSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASL--------HREQDKGKKGSRAQESD---GGSTESSGSEAEAKERKQ-------RYGLQTYGGGSNGANGNASGDGRARALGPDPEVLAAKEKAR 286
MSL FL+KK+W+ NL+NVEKVW AEQK A EE+++AE RK I EERQLQEL++LQ + G DK+ +LDWMYEGP A+ ++ E+YLLGKE +E+ D + ++ S ND F RL+EDP++LI++ + RE V+KNPVKM RI+ +++ KK +K AK+ K+ +K A+K +K + ++K DS AS +R +D K R D G S S S E ++ +YGL + G AS D +LGP+ + L EKAR
Sbjct: 1 MSLAFLSKKSWHTANLRNVEKVWIAEQKHAAEEQKVAELRKNIEEERQLQELRQLQAARG--DKSAAMERLDWMYEGPSAS---REKTAEEYLLGKEYNGEEEKAAKGDVNLSTTTKYGSLVLTKSALPANDAFQRLNEDPMMLIRKRQQAAREQVLKNPVKMKRIKDEVDRLKEDKKARKKAKKAVKKEKKHARKEEKRRLKRKHVYDSGSEASADENEERADYRHKDDLSKRQRGHGRDRERGRSHSRSKSPRSTSESRRKLLDPDGKYGLISKAGAV------ASRDIDTSSLGPNAKYL---EKAR 296
BLAST of EWM22657.1 vs. NCBI_GenBank
Match: gi|695426734|ref|XP_009529495.1| (hypothetical protein PHYSODRAFT_509106 [Phytophthora sojae] >gi|348675928|gb|EGZ15746.1| hypothetical protein PHYSODRAFT_509106 [Phytophthora sojae]) HSP 1 Score: 150.599 bits (379), Expect = 8.382e-38 Identity = 138/434 (31.80%), Postives = 220/434 (50.69%), Query Frame = 0
Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMAEFRKQIAEERQLQELKELQVSAGLVDKNQTA---KLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQ-----DSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLE--AELARKKEKKNAKREKKRARKEAKKAKKEKKRQKDSMDSAEAASLHREQDKGKKGSRAQESDGG----------STESSGSEAEAKERKQRYGLQTYGGGSNGANGNASGDGRARALGPDPEVLA-------------AKEKARLEEERERRERLRRKPLTEKEKAERLSAMRLDGIVNEEQRRSRVEKGRHQEKEEAE-REAGTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRNRGGEAGFL 400
MSL FL+KK+W+ NL+NVEKVW AEQK A EEK++AE RK I EERQLQEL++LQ + G N+ A +LDWMYEGP A ++ E+YLLGKE ++ D ++ + S ND F RL+EDP++LI++ + RE V+KNPVKM +I+ Q+E E + ++K +K++ + ++ ++ KK++K D ++A+ L ++D+ K R + G + S S + + + +YGL + G S D +LGP+ + +A ++ + RE R LT++EK M + + +QR + K ++K+E + RE T+ N PEFL++L Y+ G+ + +R+ R H QR + + FL
Sbjct: 1 MSLAFLSKKSWHTANLRNVEKVWIAEQKHAAEEKKVAELRKNIEEERQLQELRQLQAAQG----NKAAAVERLDWMYEGPSAA---REKTAEEYLLGKEYKGGDEKAAKGDVDLSATTKYGSLALTKSALPANDAFQRLNEDPMMLIRKRQQAAREQVLKNPVKMKKIKDQVERLKEDKKARKKAKKAAKKEKKQARKEEKRRLKKKRKHGEDDSDASDLSGDEDEEKADYRRSKHHRGQGRDRERGRSPSRSYKSRRKPLDTEGKYGLISKAGAVE------SKDVDKTSLGPNAKYVAKAREAKRLEEEERRRKLGKTSSHRESR------ALTDEEKQRMAQQM----VEDAKQRDEYIAKRASRKKDELDKREHEATSSN---------PEFLRELHSAAYLDGESNMGDRLRRNAHYIQR-KADSSNFL 401 The following BLAST results are available for this feature:
BLAST of EWM22657.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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