EWM22642.1, cds8025 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|585103207|gb|EWM22642.1| (metal ion transporter family [Nannochloropsis gaditana]) HSP 1 Score: 625.935 bits (1613), Expect = 0.000e+0 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 Query: 1 MDIDLNGVEEEEFEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILAYMYVSRIMVT 303 MDIDLNGVEEEEFEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILAYMYVSRIMVT Sbjct: 1 MDIDLNGVEEEEFEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILAYMYVSRIMVT 303
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|298709068|emb|CBJ31017.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.2041 bits (230), Expect = 2.129e-18 Identity = 79/294 (26.87%), Postives = 132/294 (44.90%), Query Frame = 0 Query: 12 EFEFLALEAVLMTINDHFKSKLKDLRPHI--IKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILAYMYVSRIMVT 303 EFE A+EA+L + + +++++ I I N G ++++ DT R L + + + + ++ + ++ +L+D+ L M++LTR +Q ED P L+ A VL ED +E E+LLE++L D N + EL+ ++TE V VKLD+ARN++LT G +F++ + C GAL+SGIFGMNL +G+ N+ F V + V TV + A+ Y I+V+ Sbjct: 76 EFELKAVEALLSVSSKRLEREVREVEKPIANIVNILEGPGKGATSAKNNDTFRVLLNSINVLENRAKARRRALLMVLEDDTDLAMMNLTR-------------MYQSPEDYLPPLS-----------------------------------------------AEVL---EDHEEMELLLEAYLQDINSIYNVLELLLNRARSTEALVMVKLDIARNRILTAGLVFSMASTCLTVGALVSGIFGMNLKSGL-----DSNNILFEVVAIG-TVCACTVAFCGVFAFFYRHGILVS 300
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|901806458|gb|KMZ63665.1| (Magnesium transporter MRS2 [Zostera marina]) HSP 1 Score: 85.1149 bits (209), Expect = 5.060e-15 Identity = 78/283 (27.56%), Postives = 127/283 (44.88%), Query Frame = 0 Query: 10 EEEFEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLN--SEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSF--IVILMTVVG 288 E FEF LE L TI +S + +L N +L + +N +++ + +R LKS +T A+V+ + + LLDD E + L+LTR + Q QQ + + AS NE Q R RT SI +L + ED +E E+LLE++ + K ++E + +TE+YV ++LD RN+L+ + + +V+ LI+G F MN + G F FVG+ SF ++L+ ++G Sbjct: 161 ELPFEFQILEICLETICSFLESSVLELE----NNAYPILDDLAMNVSTKNLERVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMSQLYLTRKEMQNQQYESLMESG----------ASIPSNEVISPQSKLQR-----------LNSRTHASILSIA-------TSILSEDEDVEELEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNQRNELIQLQLILTIVSFAIGINTLIAGAFAMNFNCELFEQKG---LFWPFVGLTSFGSFLVLLLILG 408
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|1214712348|gb|OWZ23296.1| (CorA Metal Ion Transporter [Phytophthora megakarya]) HSP 1 Score: 84.7297 bits (208), Expect = 6.232e-15 Identity = 44/103 (42.72%), Postives = 67/103 (65.05%), Query Frame = 0 Query: 181 DSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVIL 283 DS+EAE+L+E++L D EL++ + NTE+ V +KLD RN LL I +F+LV++ + G LISG+FGMNL +GV+ G +F+G+V F ++L Sbjct: 298 DSEEAEVLIENYLQDIFSTRTTAELLQHRIANTESLVTLKLDSKRNYLLGIELIFSLVSINISVGTLISGVFGMNLVSGVAEAKG------WFLGVVIFTIVL 394
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|669156952|ref|XP_008614038.1| (hypothetical protein SDRG_09860 [Saprolegnia diclina VS20] >gi|530734295|gb|EQC32537.1| hypothetical protein SDRG_09860 [Saprolegnia diclina VS20]) HSP 1 Score: 85.1149 bits (209), Expect = 6.307e-15 Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 0 Query: 177 MDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVG---IVSFIVILMTV 286 M A DS+EAE LLE++L D + M K LI++ M NTEN V +K+D RN LL+I T+F L+ +C F ++ FGMNL +G +P+ F +G +S ++IL+ V Sbjct: 306 MFAFDSEEAEALLEAYLQDIHSMRAKVRLIQQRMANTENVVMLKMDAVRNSLLSIDTMFGLIMLCLNFAMFVASSFGMNLVSGYET---TPHLFWGVLGSSVSISMVLILLGV 415
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|301094159|ref|XP_002997923.1| (CorA Metal Ion Transporter (MIT) Family [Phytophthora infestans T30-4] >gi|262109709|gb|EEY67761.1| CorA Metal Ion Transporter (MIT) Family [Phytophthora infestans T30-4]) HSP 1 Score: 84.7297 bits (208), Expect = 6.492e-15 Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = 0 Query: 181 DSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVILM--TVVGGSIL 292 DS+EAE+L+E++L D +L++ + NTE+ V +KLD RN LL + +F+LV++ + G LISG+FGMNL +GV+ SG +F+G+V F V+L T G I Sbjct: 280 DSEEAEVLIENYLQDIFSTRTTADLLQHRIANTESLVTLKLDSKRNYLLRVQLVFSLVSINISVGTLISGVFGMNLTSGVADASG------WFLGVVIFTVVLFITTTYAGIIF 387
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|813120127|ref|XP_012196390.1| (hypothetical protein SPRG_02424 [Saprolegnia parasitica CBS 223.65] >gi|641538905|gb|KDO32726.1| hypothetical protein SPRG_02424 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 84.7297 bits (208), Expect = 6.615e-15 Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 0 Query: 177 MDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVG---IVSFIVILMTV 286 M A DS+EAE LLE++L D + M K LI++ M NTEN V +K+D RN LL+I T+F L+ +C F ++ FGMNL +G +P+ F +G +S ++IL+ V Sbjct: 304 MFAFDSEEAEALLEAYLQDIHSMRAKVRLIQQRMANTENVVMLKMDAVRNSLLSIDTMFGLIMLCLNFAMFVASSFGMNLVSGYET---TPHLFWGVLGSSVSISMVLILLGV 413
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|1173951053|gb|OQR98966.1| (CorA Metal Ion Transporter (MIT) Family [Achlya hypogyna]) HSP 1 Score: 84.7297 bits (208), Expect = 8.232e-15 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 0 Query: 181 DSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVG---IVSFIVILMTV 286 DS+EAE LLE++L D + M K LI+ M NTEN V +K+D RN LL+I T+F LV +C F ++ FGMNL +G +P+ F +G SF+ I++ V Sbjct: 310 DSEEAEALLEAYLQDIHSMRAKVGLIQRRMLNTENVVMLKMDAVRNSLLSIDTMFGLVMLCLNFAMFVASAFGMNLLSGYET---TPHIFWLVLGSSVTFSFVFIVLGV 415
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|567197106|ref|XP_006406476.1| (hypothetical protein EUTSA_v10020646mg [Eutrema salsugineum] >gi|557107622|gb|ESQ47929.1| hypothetical protein EUTSA_v10020646mg [Eutrema salsugineum]) HSP 1 Score: 83.1889 bits (204), Expect = 3.533e-14 Identity = 77/306 (25.16%), Postives = 142/306 (46.41%), Query Frame = 0 Query: 13 FEFLALEAVLMTINDHFKSKLKDLR----PHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQ--------KQEDQKPNLASAQKNEYHQQQEW-RFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMN----LFNGVSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILA-YMYVSRI 300 FEF+ALEA L + +S+ L P + K + +TLN E +RQ+KS++ +V+ + + LLDD+E + ++LT +Q+ + ++ +ED+ L +E ++ + + R D H+ +L S +R S G T + + + D +E E+LLE++ + + K ++E + +TE+Y+ + LD +N+LL +G + + + ++G+FGMN LFN G G L TV+GG++ + ++YV I Sbjct: 187 FEFVALEACLEAASSSLESEAVRLELEAHPALDKLTSKI---STLNLER---VRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLAQKLENSSASSMNESESVEIDLPEEDEDDRLPPEFASEANRDESYLRANDAHD--LLMSAHSALSRN---SRGTHTSSTRSAI-TNKFDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNQLLQMGVMLTTATLVMSAFIAVAGVFGMNITIELFNDEKAGPGR---------------FLWTVIGGTVGSIFLYVGAI 465
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|1070956036|gb|OEL27213.1| (putative magnesium transporter MRS2-H [Dichanthelium oligosanthes]) HSP 1 Score: 82.4185 bits (202), Expect = 6.591e-14 Identity = 81/296 (27.36%), Postives = 129/296 (43.58%), Query Frame = 0 Query: 10 EEEFEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNL-FNG---VSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILAYMYVSRIM 301 E FEF LE L + F S L DL H + L N +++ + + +R LKS +T+ A V+ + V LLD E++ LHL+R Q++ QQ Q LASA N F + R SI + +D D+ E+LLES+ + + + +++ + +TE+Y+ ++LD RN+L+ + +V+ A I F MNL NG +VG P FVG S +L+ VV + AY + +R++ Sbjct: 259 ELPFEFQVLELTLEAVCLSFNSSLSDLNRHAVFVLDELTKN--VSTRNLERVRSLKSNLTSLLAGVQKVRDEVEHLLDHNENMAQLHLSRKQTKNQQDQAL-------------LASAAINSI-------------------FSSKTSLARPNSIINQAMGVATSATLDT-DAGNLEMLLESYFIQLDGIRNRIAMVRGYIVDTEDYINIQLDNQRNQLIQFHLILIIVSFGIAINTWIVASFAMNLPHNGDKNTAVGPFLP-----FVGATSSFCLLVVVV---LFAYAWRNRLL 511 The following BLAST results are available for this feature:
BLAST of EWM22642.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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