EWM22674.1, cds8018 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22674.1 vs. NCBI_GenBank
Match: gi|585103239|gb|EWM22674.1| (1-family small gtpase [Nannochloropsis gaditana]) HSP 1 Score: 391.734 bits (1005), Expect = 6.215e-138 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 Query: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLARKLD 193 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLARKLD Sbjct: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLARKLD 193
BLAST of EWM22674.1 vs. NCBI_GenBank
Match: gi|299472956|emb|CBN77357.1| (ARFRP1, ARF-like Ras superfamily GTPase [Ectocarpus siliculosus]) HSP 1 Score: 258.07 bits (658), Expect = 6.163e-85 Identity = 117/190 (61.58%), Postives = 155/190 (81.58%), Query Frame = 0 Query: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190 MFSL+AG I+YLFSKTE++VLILGLD+AGKTTLLEQ KGIF+KVQGIPP KI PTVGLNVGKMD+ GC + WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA++AF ++ + +L VP+++ ANKQDLP A+S D++ F++ ++ + ++ CS LTC+G+ G+ W+V EAK AR Sbjct: 1 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADISVQFDMHKITK-VAFRLQPCSGLTCDGVAEGIHWIVDEAKKRAR 189
BLAST of EWM22674.1 vs. NCBI_GenBank
Match: gi|673051317|ref|XP_008879619.1| (hypothetical protein H310_13763 [Aphanomyces invadans] >gi|574464648|gb|ETV91693.1| hypothetical protein H310_13763 [Aphanomyces invadans]) HSP 1 Score: 206.068 bits (523), Expect = 2.145e-64 Identity = 99/190 (52.11%), Postives = 128/190 (67.37%), Query Frame = 0 Query: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190 M SL G +YLFSK EVH+LI+GLD+AGKTTLLEQ K +F K GIP +KI PTVGLN+ K+DI VI WDLGGQ R+R+IW KYY ++HGVVFV+D++D RF+EAK A AS+L H +L DVPVL+ ANK DL ++ ++ E++R+ + SALT +G+ V W V K R Sbjct: 1 MISLFWGLWQYLFSKAEVHLLIIGLDYAGKTTLLEQLKTMFGKKAGIPLDKIPPTVGLNIAKVDISRTNVIFWDLGGQERLRAIWSKYYNESHGVVFVVDSSDTARFDEAKAALASMLAHPELSDVPVLVLANKSDLDASMGTAELTARLELNRLAEAHPWTLRPISALTTDGIADAVTWFVSAVKQTGR 190
BLAST of EWM22674.1 vs. NCBI_GenBank
Match: gi|669157722|ref|XP_008614423.1| (hypothetical protein SDRG_10220 [Saprolegnia diclina VS20] >gi|530733779|gb|EQC32021.1| hypothetical protein SDRG_10220 [Saprolegnia diclina VS20]) HSP 1 Score: 204.142 bits (518), Expect = 1.083e-63 Identity = 102/190 (53.68%), Postives = 130/190 (68.42%), Query Frame = 0 Query: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190 MFSLL GF YLFSK EVH+LI+GLD+AGKTTLLEQ KG F K GIP +KI PTVGLN+ K+DI VI WDLGGQ R+R+IW KYY+++HG+VFVLDAAD RF+EA+ A ++L + +L +P+LL ANK DL A +AE + + H + S SAL+ +G+E V WL+ K R Sbjct: 1 MFSLLLGFWNYLFSKAEVHILIIGLDYAGKTTLLEQLKGRFGKKPGIPLDKIPPTVGLNIAKVDISRTNVIFWDLGGQERLRAIWSKYYSESHGIVFVLDAADEARFDEARSALDTMLANAELDGIPILLLANKNDLADAQDMGVIAECLGVASLPSHHEARAQSISALSMDGVEDAVHWLIGAVKNSDR 190
BLAST of EWM22674.1 vs. NCBI_GenBank
Match: gi|698814202|ref|XP_009840130.1| (hypothetical protein H257_14094 [Aphanomyces astaci] >gi|574104891|gb|ETV70418.1| hypothetical protein H257_14094 [Aphanomyces astaci]) HSP 1 Score: 204.142 bits (518), Expect = 1.373e-63 Identity = 99/190 (52.11%), Postives = 127/190 (66.84%), Query Frame = 0 Query: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190 M SL G +YLFSK EVH+LI+GLD+AGKTTLLEQ K +F K GIP +KI PTVGLN+ K+DI VI WDLGGQ R+R+IW KYY+++HGVVFV+D++D RF+EA+ A AS+L H +L DVP+L+ ANK DL A + ++ E+DR+ SALT G+ V W V K R Sbjct: 1 MISLFWGLWQYLFSKAEVHLLIIGLDYAGKTTLLEQLKTMFGKKAGIPLDKIPPTVGLNIAKVDISRTNVIFWDLGGQERLRAIWSKYYSESHGVVFVVDSSDPARFDEARAALASMLAHPELSDVPLLVLANKSDLDTAQTSAELTARLELDRLAESHQWTQRPISALTTSGIADAVTWFVSAVKQTDR 190
BLAST of EWM22674.1 vs. NCBI_GenBank
Match: gi|1173943435|gb|OQR92288.1| (ADP-ribosylation factor-related protein [Achlya hypogyna]) HSP 1 Score: 202.986 bits (515), Expect = 3.194e-63 Identity = 101/192 (52.60%), Postives = 132/192 (68.75%), Query Frame = 0 Query: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLARKL 192 MFSLL GF YLFSK EVH+LI+GLD+AGKTTLLEQ K F K GIP +KI PTVGLN+ K+DI+ VI WDLGGQ R+R+IW KYY+++HG+VFVLDAAD RF EAK+A ++L + +L +P+L+ +NK DL A V+E+ + + R V + SAL+ G+E V WL++ K R L Sbjct: 1 MFSLLMGFWNYLFSKAEVHILIIGLDYAGKTTLLEQLKSRFGKKPGIPLDKIPPTVGLNIAKVDIKRTNVIFWDLGGQERLRAIWSKYYSESHGIVFVLDAADEDRFAEAKVALDTMLANAELEGIPILILSNKTDLAKAKDLPTVSEALGVGAIPRSHETLVQAISALSMTGVEDAVNWLIEAVKNSDRFL 192
BLAST of EWM22674.1 vs. NCBI_GenBank
Match: gi|813149533|ref|XP_012200413.1| (hypothetical protein SPRG_05739 [Saprolegnia parasitica CBS 223.65] >gi|641534938|gb|KDO28868.1| hypothetical protein SPRG_05739 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 202.216 bits (513), Expect = 5.951e-63 Identity = 100/190 (52.63%), Postives = 130/190 (68.42%), Query Frame = 0 Query: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190 MFSLL GF YLFSK EVH+LI+GLD+AGKTTLLEQ KG F K GIP +KI PTVGLN+ K+DI VI WDLGGQ R+R+IW KYY+++HG+VFVLDAAD RF+EA+ A ++L + +L +P+LL ANK DL A ++E + + H + + SAL+ +G+E V WL+ K R Sbjct: 1 MFSLLMGFWNYLFSKAEVHILIIGLDYAGKTTLLEQLKGRFGKKPGIPLDKIPPTVGLNIAKVDISRTNVIFWDLGGQERLRAIWSKYYSESHGIVFVLDAADEARFDEARSALDTMLANAELDGIPILLLANKNDLADAKDVAVISERLGVGSIPDHHETLLRAISALSMDGVEDAVHWLIGAVKNSDR 190
BLAST of EWM22674.1 vs. NCBI_GenBank
Match: gi|1044597169|ref|XP_017436133.1| (PREDICTED: ADP-ribosylation factor-related protein 1 [Vigna angularis] >gi|1044597171|ref|XP_017436134.1| PREDICTED: ADP-ribosylation factor-related protein 1 [Vigna angularis] >gi|920712214|gb|KOM53463.1| hypothetical protein LR48_Vigan09g212200 [Vigna angularis] >gi|965600243|dbj|BAT87421.1| hypothetical protein VIGAN_05078400 [Vigna angularis var. angularis]) HSP 1 Score: 202.216 bits (513), Expect = 8.872e-63 Identity = 94/183 (51.37%), Postives = 128/183 (69.95%), Query Frame = 0 Query: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQ 183 MFSL G KYLFSK E+HVLILG+D AGKTTLLE+ K ++ ++GIPP++I PTVGLN+G++++ ++ WDLGGQ +RSIW+KYY +AH V+FV+DAA RFE+AK A +L HEDL P+L+ ANKQDLP A+S E++A ++ + L RV + SA G+ WLV+ Sbjct: 1 MFSLFYGLWKYLFSKMELHVLILGIDKAGKTTLLEKMKSVYSNIEGIPPDRIIPTVGLNIGRIEVTNSKLVFWDLGGQPGLRSIWEKYYEEAHAVIFVIDAASPSRFEDAKSALEKVLRHEDLQGAPLLILANKQDLPEAVSAEELARYLDLKK-LDERVYMFEAVSAYDGIGIRESAEWLVE 182
BLAST of EWM22674.1 vs. NCBI_GenBank
Match: gi|951043184|ref|XP_014518312.1| (PREDICTED: ADP-ribosylation factor-related protein 1 [Vigna radiata var. radiata] >gi|951043189|ref|XP_014518313.1| PREDICTED: ADP-ribosylation factor-related protein 1 [Vigna radiata var. radiata]) HSP 1 Score: 201.83 bits (512), Expect = 1.388e-62 Identity = 94/183 (51.37%), Postives = 128/183 (69.95%), Query Frame = 0 Query: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQ 183 MFSL G KYLFSK E+HVLILG+D AGKTTLLE+ K ++ ++GIPP++I PTVGLN+G++++ ++ WDLGGQ +RSIW+KYY +AH V+FV+DAA RFE+AK A +L HEDL P+L+ ANKQDLP A+S E++A ++ + L RV + SA G+ WLV+ Sbjct: 1 MFSLFYGLWKYLFSKMELHVLILGIDKAGKTTLLEKMKSMYSNIEGIPPDRIIPTVGLNIGRIEVTNSKLVFWDLGGQPGLRSIWEKYYEEAHAVIFVIDAASPSRFEDAKSALEKVLRHEDLQGAPLLILANKQDLPEAVSAEELARYLDLKK-LDERVYMFEAVSAYDGIGIRESAEWLVE 182
BLAST of EWM22674.1 vs. NCBI_GenBank
Match: gi|1029005898|ref|XP_016666824.1| (PREDICTED: ADP-ribosylation factor-related protein 1-like [Gossypium hirsutum] >gi|1050575710|ref|XP_017608764.1| PREDICTED: ADP-ribosylation factor-related protein 1-like [Gossypium arboreum] >gi|1050575712|ref|XP_017608765.1| PREDICTED: ADP-ribosylation factor-related protein 1-like [Gossypium arboreum] >gi|728830340|gb|KHG09783.1| ADP-ribosylation factor-related 1 [Gossypium arboreum]) HSP 1 Score: 201.445 bits (511), Expect = 1.927e-62 Identity = 96/183 (52.46%), Postives = 128/183 (69.95%), Query Frame = 0 Query: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQ 183 MFSL G KYLFSKTE HVLILG+D AGKTTLLE+ K ++ + G+PP++I PTVGLN+G++ + + WDLGGQ +RSIW+KYY +AH V+FV+DAA RFE++K A +L HEDL P+L+ ANKQDL ALS E++AE ++ + L RV + SA G++ GV WLV+ Sbjct: 1 MFSLFYGLWKYLFSKTEFHVLILGIDKAGKTTLLEKLKSVYSNLAGVPPDRIVPTVGLNIGRIGVSNTKFVFWDLGGQPGLRSIWEKYYEEAHAVIFVIDAACPSRFEDSKSALEKVLRHEDLQGAPLLILANKQDLSEALSAEELAEYLDLKK-LDERVYMFEAASAFDGMGIKEGVEWLVE 182 The following BLAST results are available for this feature:
BLAST of EWM22674.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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