EWM22648.1, cds8016 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22648.1 vs. NCBI_GenBank
Match: gi|585103213|gb|EWM22648.1| (proteasome subunit beta type 5 [Nannochloropsis gaditana]) HSP 1 Score: 577.785 bits (1488), Expect = 0.000e+0 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
Query: 1 MHAIGTDILDLGKSLRAGGKRGAILSPHAKAEEAGFLLPAVEDPASFCKTNFGVGYGTDQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQEEKTASMAM 278
MHAIGTDILDLGKSLRAGGKRGAILSPHAKAEEAGFLLPAVEDPASFCKTNFGVGYGTDQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQEEKTASMAM
Sbjct: 1 MHAIGTDILDLGKSLRAGGKRGAILSPHAKAEEAGFLLPAVEDPASFCKTNFGVGYGTDQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQEEKTASMAM 278
BLAST of EWM22648.1 vs. NCBI_GenBank
Match: gi|299116096|emb|CBN74512.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 402.905 bits (1034), Expect = 2.381e-139 Identity = 196/270 (72.59%), Postives = 221/270 (81.85%), Query Frame = 0
Query: 4 IGTDILDLGKSLRAGGKRGAILSPHAKAEEAG-FLLPAVEDPASFCKTNFGVGYGTDQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQEEK 272
+GT ILD G K A A+A G F LP V +PA+FC N G GYGTD Q++KFAKGTTTLAFKF GGI+V+VDSRST G Y+ASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCR+YELR+KERISVAAASKLL+NT+ QYRGYGLSMGTM+ GWDKTGPQL+Y D+DG RL GNLFSVGSGSTYAYGVLD HY+ D++ +EAIELG+RAIYHATHRDAYSG I NVY V+ GWVKV +GD N++HYK EEK
Sbjct: 7 VGTSILDTGAR-----KAPAAGPAEAQAGVPGMFGLPNVANPAAFCSANLGCGYGTDHAQDIKFAKGTTTLAFKFQGGIIVSVDSRSTMGPYIASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEK 271
BLAST of EWM22648.1 vs. NCBI_GenBank
Match: gi|219118149|ref|XP_002179855.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408908|gb|EEC48841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 374.015 bits (959), Expect = 4.620e-128 Identity = 188/280 (67.14%), Postives = 222/280 (79.29%), Query Frame = 0
Query: 3 AIGTDILDLGKSLRAGGKR----GAILSPHAKAEEAGFLLPAVEDPASFCKTNFGVGYGT-DQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQEEKTASMA 277
AIG+DILD+G S +A KR G L + F +P V DPA +C++NF G D QE+KFAKGTTTLAFKF+GGI+V+VDSRST G Y+ASGTVKKVIEINP+LLGTMAGGAADCSFWERNLG++CRLYELR+ RI+VAAASKLLAN + YRGYGLSMGTMITGWD+TGPQL+YVDNDG RLKG FSVGSGS YAYGVLD H+R+DLS +EAI+LG+RAIYHATHRDA SGGI N+YHV GW + D N++HY++ EEK +M+
Sbjct: 9 AIGSDILDIG-SRKALTKRQRGIGVDLGVPGQ-----FDVPNVPDPALYCRSNFASACGNADAGQEVKFAKGTTTLAFKFNGGIIVSVDSRSTMGYYIASGTVKKVIEINPFLLGTMAGGAADCSFWERNLGMECRLYELRNGRRITVAAASKLLANVMSAYRGYGLSMGTMITGWDETGPQLYYVDNDGTRLKGKYFSVGSGSMYAYGVLDNHWREDLSVEEAIDLGKRAIYHATHRDAASGGINNLYHVTADGWKYIHGIDVNDMHYEFAEEKKNAMS 282
BLAST of EWM22648.1 vs. NCBI_GenBank
Match: gi|397572438|gb|EJK48257.1| (hypothetical protein THAOC_32963 [Thalassiosira oceanica]) HSP 1 Score: 371.318 bits (952), Expect = 1.909e-127 Identity = 174/230 (75.65%), Postives = 202/230 (87.83%), Query Frame = 0
Query: 44 PASFCKTNFGVGYG-TDQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQEEK 272
PA FC+ NF G +DQ QE+KFAKGTTTLAFKF+GGI+V+VDSRST GAY+ASGTVKKVIEINP+LLGTMAGGAADCSFWERNLGIQCR+YELR+K+RISVAAASKLLANT+ YRGYGLSMGTMITGWD+TGPQL+YVD+DG RL G FSVGSGSTYAYGVLD +YR DL+ +EAI+LG+RAIYHA HRDA SG I N+YHV + GWVK+ + D N++HY++ EEK
Sbjct: 12 PAHFCRNNFASACGNSDQGQEVKFAKGTTTLAFKFNGGIIVSVDSRSTMGAYIASGTVKKVIEINPFLLGTMAGGAADCSFWERNLGIQCRMYELRNKKRISVAAASKLLANTMRSYRGYGLSMGTMITGWDETGPQLYYVDDDGTRLHGRYFSVGSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSGSINNLYHVTKDGWVKIHAIDTNDMHYQFMEEK 241
BLAST of EWM22648.1 vs. NCBI_GenBank
Match: gi|1072228325|gb|OEU13062.1| (LMP7-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 368.237 bits (944), Expect = 1.048e-125 Identity = 177/266 (66.54%), Postives = 216/266 (81.20%), Query Frame = 0
Query: 4 IGTDILDLGKSLRAGGKRGAILSPHAKAEEAGFLLPAVEDPASFCKTNFGVGYGT-DQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKY 268
IG DILD+G R +RGA P F +P V +PA++C+ NF GT D++Q++KFAKGTTTLAFKF GG++V+VDSRST GAY+ASGTVKKVIEIN +LLGTMAGGAADCSFWERNLG++CRLY+LR+ RISVA+ASKLLAN + YRGYGLSMGTMI GWD+ GPQL+YVD+DG RLKG +FSVGSGSTYAYG+LD +YR+DL+ +EAI+LG+RAIYHA HRDA SGGI N+YH+ + G+VKV S D N +HY+Y
Sbjct: 12 IGNDILDIGS--RKARRRGA--DPMMMGTPGQFDVPNVSNPAAYCRNNFASVCGTGDENQDVKFAKGTTTLAFKFQGGVIVSVDSRSTMGAYIASGTVKKVIEINSFLLGTMAGGAADCSFWERNLGMECRLYQLRNGRRISVASASKLLANVMRSYRGYGLSMGTMIAGWDEKGPQLYYVDDDGTRLKGKMFSVGSGSTYAYGILDNYYREDLTVEEAIDLGKRAIYHAAHRDAASGGINNLYHMTKDGFVKVHSIDVNTMHYEY 273
BLAST of EWM22648.1 vs. NCBI_GenBank
Match: gi|1210516843|dbj|GAX24332.1| (20S proteasome subunit beta 5 [Fistulifera solaris]) HSP 1 Score: 367.466 bits (942), Expect = 2.427e-125 Identity = 182/280 (65.00%), Postives = 224/280 (80.00%), Query Frame = 0
Query: 4 IGTDILDLGKSL---RAGGKRGAI-LSPHAKAEEAG-FLLPAVEDPASFCKTNFGVGYGT-DQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQEEKTASMA 277
IG DILD+G R G + I LS G F +P V+DPA +C ++F GT D QE+KFAKGTTTLAFKF+GGI+V+VDSR+TQG Y++S TVKKVIE+NPYLLGTMAGGAADCS+WER L +QCR+YELR+ RI+VAAASKLLA T+ YRGYGLSMGTMITGWD+TGPQL+YVD+DG RLKG +FSVGSGST+AYGVLD +YR+DL+ +EAI+LG+RAIYHATHRDA SGGI N+YHV + GWVK+ + D N++HY+++EEK M+
Sbjct: 11 IGDDILDIGSRKAVDRYCGNKAQIGLSQDLLMGRPGAFDVPNVKDPALYCSSHFRSTCGTGDAGQEIKFAKGTTTLAFKFNGGIIVSVDSRATQGNYISSQTVKKVIEMNPYLLGTMAGGAADCSYWERRLNLQCRMYELRNGRRITVAAASKLLAGTMASYRGYGLSMGTMITGWDETGPQLYYVDDDGTRLKGKMFSVGSGSTFAYGVLDNYYREDLTLEEAIDLGKRAIYHATHRDAASGGINNLYHVTKDGWVKIHAIDVNDMHYEFEEEKRNEMS 290
BLAST of EWM22648.1 vs. NCBI_GenBank
Match: gi|1210515085|dbj|GAX26048.1| (20S proteasome subunit beta 5 [Fistulifera solaris]) HSP 1 Score: 363.999 bits (933), Expect = 6.126e-124 Identity = 179/280 (63.93%), Postives = 222/280 (79.29%), Query Frame = 0
Query: 4 IGTDILDLGK----SLRAGGKRGAILSPHAKAEEAG-FLLPAVEDPASFCKTNFGVGYGT-DQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQEEKTASMA 277
+G DILD+G G K LS G F +P V+DPA +C ++F GT D QE+KFAKGTTTLAFKF+GGI+V+VDSR+TQG Y++S TVKKVIE+NPYLLGTMAGGAADCS+WER L +QCR+YELR+ RI+VAAASKLLA T+ YRGYGLSMGTMITGWD+TGPQL+YVD+DG RLKG +FSVGSGST+AYGVLD +YR+DL+ +EAI+LG+RAIYHAT+RDA SGGI N+YHV + GWVK+ + D N++HY+++EEK M+
Sbjct: 6 VGDDILDIGSRKAVDRYCGNKAQLGLSQDLLMGRPGAFDVPNVKDPALYCSSHFRSTCGTGDAGQEIKFAKGTTTLAFKFNGGIIVSVDSRATQGNYISSQTVKKVIEMNPYLLGTMAGGAADCSYWERRLNLQCRMYELRNGRRITVAAASKLLAGTMASYRGYGLSMGTMITGWDETGPQLYYVDDDGTRLKGKMFSVGSGSTFAYGVLDNYYREDLTLEEAIDLGKRAIYHATYRDAASGGINNLYHVTKDGWVKIHAIDVNDMHYEFEEEKRNEMS 285
BLAST of EWM22648.1 vs. NCBI_GenBank
Match: gi|224001200|ref|XP_002290272.1| (proteasome subunit beta type 5 precursor [Thalassiosira pseudonana CCMP1335] >gi|220973694|gb|EED92024.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 360.147 bits (923), Expect = 1.230e-122 Identity = 182/283 (64.31%), Postives = 217/283 (76.68%), Query Frame = 0
Query: 4 IGTDILDLGKSL--RAGGKR-------GAILSPHAKAEEAG-FLLPAVEDPASFCKTNFGVGYGTDQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQEEKTASM 276
IG+DILD+G S R+ +R GAI P E G F +P V D + +KFAKGTTTLAFKF+GGI+V+VDSRST GAY+ASGTVKKVIEINP+LLGTMAGGAADCSFWERNLG+QCRLYELR+K+RI+VA+ASKLLANT+ YRGYGLSMGTMITGWD+TGPQL+YVD+DG RL G FSVGSGSTYAYGVLD +YR DL+ +EAI+LG+RAIYHA HRDA SG I N+YHV + GWVK+ + D N++HY++ EEK +M
Sbjct: 8 IGSDILDIGSSKFDRSSDERRGRAVGSGAICPPSLMLGEPGQFEVPNVADVSG-----------------VKFAKGTTTLAFKFNGGIIVSVDSRSTMGAYIASGTVKKVIEINPFLLGTMAGGAADCSFWERNLGMQCRLYELRNKKRITVASASKLLANTMSSYRGYGLSMGTMITGWDETGPQLYYVDDDGTRLHGRYFSVGSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSGSINNLYHVTKDGWVKIHAIDVNDMHYEFLEEKQNAM 273
BLAST of EWM22648.1 vs. NCBI_GenBank
Match: gi|676390683|ref|XP_009038619.1| (hypothetical protein AURANDRAFT_28593 [Aureococcus anophagefferens] >gi|323450997|gb|EGB06876.1| hypothetical protein AURANDRAFT_28593 [Aureococcus anophagefferens]) HSP 1 Score: 356.681 bits (914), Expect = 4.117e-121 Identity = 168/261 (64.37%), Postives = 208/261 (79.69%), Query Frame = 0
Query: 8 ILDLGKSLRAGGKRGAILSPHAKAEEAGFLLPAVEDPASFCKTNFGVGYGTDQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKY 268
+LD+GK+ + + + A F L V DPA++ NFGVGYGTD HQ++KFAKGTTTLAFKF+GG++++VDSRST G Y+AS TVKKVIEINP+LLGTMAGGAADCSFWERNLG QCR++ELR+K R+SVAAASK+LANT+ YRG GLSMGTM+ GWD+TGPQL+YVD+DG RL GN+F VGSGSTYAYGV+D++ R DL+ EAI+LGRRAI A HRDAYSGG N+YH++E GW + + D N+L+Y Y
Sbjct: 9 VLDIGKAAK---PEEEVSAAAQLASPTSFALAPVVDPAAYSAQNFGVGYGTDHHQDVKFAKGTTTLAFKFNGGVIISVDSRSTMGPYIASQTVKKVIEINPFLLGTMAGGAADCSFWERNLGTQCRMFELRNKRRVSVAAASKMLANTMYSYRGRGLSMGTMVCGWDETGPQLYYVDDDGTRLHGNVFCVGSGSTYAYGVIDSNLRDDLTVPEAIDLGRRAIAGAAHRDAYSGGWNNLYHMKETGWEFIGAVDTNDLYYHY 266
BLAST of EWM22648.1 vs. NCBI_GenBank
Match: gi|754348222|ref|XP_004347536.2| (hypothetical protein CAOG_04785 [Capsaspora owczarzaki ATCC 30864] >gi|765553472|gb|KJE94093.1| hypothetical protein CAOG_004785 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 346.665 bits (888), Expect = 6.535e-117 Identity = 166/236 (70.34%), Postives = 195/236 (82.63%), Query Frame = 0
Query: 36 FLLPAVEDPASFCKTNFGVGYGTDQHQELKF--AKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQ 269
F +PAV+DPA+F Y D H ++K GTTTLAFKF GI+VAVDSR+T G+Y+ASGTVKKVIEINPYLLGTMAGGAADCSFWER L +CR+YELR+KERISVAAASKLLAN V Y+ GLSMGTMITGWDK GP+L+YVD+DG RL G++FSVGSGSTYAYGVLDA +R D++ +EA ELGRR+IYHATHRDAYSGG +NVYHV+E+GWVK+ S D N+LHY Y+
Sbjct: 70 FDVPAVQDPAAFLH-----AYTEDPHSKVKIHIQHGTTTLAFKFKHGIIVAVDSRATGGSYIASGTVKKVIEINPYLLGTMAGGAADCSFWERELARRCRIYELRNKERISVAAASKLLANMVYGYKNMGLSMGTMITGWDKRGPELYYVDSDGTRLHGDMFSVGSGSTYAYGVLDAGFRYDMTPEEACELGRRSIYHATHRDAYSGGFVNVYHVREEGWVKISSTDVNQLHYGYK 300 The following BLAST results are available for this feature:
BLAST of EWM22648.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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