EWM30557.1, cds80 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30557.1 vs. NCBI_GenBank
Match: gi|585113224|gb|EWM30557.1| (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain protein [Nannochloropsis gaditana]) HSP 1 Score: 699.508 bits (1804), Expect = 0.000e+0 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0 Query: 1 MDGGSRASHRVHGPTTSTPEYKVKHNKSSHVRGILLNSRALKLLLFFLGFLYVGVIFYCRSLLHERDDAFKSEKLKWSNELYRLHDQRSEELARSRKALTEMEKVLEQKDEALTKAEQRLTAMRNTAERLDENQLIQSLRDQNLLFNHLRWGEGPVRVLLELGGSPGTVEEAEEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLARVPGAEHGRITGRKSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQGPEPDPCFAEVVKGKDVLEKVHQKLTTGFLKEEDFVLIRRMLIKGEEKGT 341 MDGGSRASHRVHGPTTSTPEYKVKHNKSSHVRGILLNSRALKLLLFFLGFLYVGVIFYCRSLLHERDDAFKSEKLKWSNELYRLHDQRSEELARSRKALTEMEKVLEQKDEALTKAEQRLTAMRNTAERLDENQLIQSLRDQNLLFNHLRWGEGPVRVLLELGGSPGTVEEAEEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLARVPGAEHGRITGRKSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQGPEPDPCFAEVVKGKDVLEKVHQKLTTGFLKEEDFVLIRRMLIKGEEKGT Sbjct: 1 MDGGSRASHRVHGPTTSTPEYKVKHNKSSHVRGILLNSRALKLLLFFLGFLYVGVIFYCRSLLHERDDAFKSEKLKWSNELYRLHDQRSEELARSRKALTEMEKVLEQKDEALTKAEQRLTAMRNTAERLDENQLIQSLRDQNLLFNHLRWGEGPVRVLLELGGSPGTVEEAEEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLARVPGAEHGRITGRKSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQGPEPDPCFAEVVKGKDVLEKVHQKLTTGFLKEEDFVLIRRMLIKGEEKGT 341
BLAST of EWM30557.1 vs. NCBI_GenBank
Match: gi|569425319|gb|ETO30840.1| (hypothetical protein RFI_06276 [Reticulomyxa filosa]) HSP 1 Score: 159.458 bits (402), Expect = 7.746e-40 Identity = 94/302 (31.13%), Postives = 146/302 (48.34%), Query Frame = 0 Query: 48 LGFLYVGVIFYCRSLLHERDDAFKSEKLKWSNELYRLHDQRSEELARSRKALTEMEKVLEQKDEALTKAEQRLTAMRNTAERLDENQ---------------------LIQSLRDQNLLFNHLRW------GEGPVRVLLELGGSPGTVEEAEEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRT-AVSGNPSLLARVPGAE---------HGRITGRKSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQGPEPDPCFAEVVKGKDVLEKV 312 +G L I+Y S + A ++K + L+ Q E+ + + + L+QK+ + + + + + + L +N L SL ++ + L++ GE V++ G +E E+APF ++PH T +FL ++ +GFW+GCH RNA HV+Q NC R A S + A+ +GR SI FQE++ ++ H PFT+G+AGRPGG DFY+NLVDN RNHGPGGQ E DPCF ++VKG +V+ + Sbjct: 494 IGALLTTSIYYTHS---NDNSAMANDKANENGSGANLYVQNKNEVRQLSLKMEAITAALKQKESEVQRNLETIRQLTDEVNELRQNSKDNGNEDEAHDEADSNKRLHALFSSLAKTDMYLSELQYHTLNPNGEVTVQINTRFGI----------IEIEMAPFNIMPHTTRYFLQMIASGFWNGCHFFRNANHVIQANCHHRCVACSFQMCCVVCKENAQAKVFFWIGTNGRHEYEPSISFQEYSEEYVHKPFTVGIAGRPGGPDFYINLVDNIRNHGPGGQDGEADPCFGKIVKGMEVIHHI 782
BLAST of EWM30557.1 vs. NCBI_GenBank
Match: gi|1210530786|dbj|GAX10737.1| (hypothetical protein FisN_14Lh256 [Fistulifera solaris]) HSP 1 Score: 143.28 bits (360), Expect = 3.617e-36 Identity = 87/258 (33.72%), Postives = 138/258 (53.49%), Query Frame = 0 Query: 98 ALTEMEKVLEQKDEALTKA-----------EQRLTAMRNTAERLDENQLIQSLRDQNLLFNHLRWGEGPVRVLLELGGSP-----GTVEEAEEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLARVPGAEHGRITGRKSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQGP-----EPDPCFAEVVKGKDVLEKVHQKLTT--GFLKEEDFVLIRRM 332 AL+E + LE+K +A T A ++R+ + +++ +N +Q + LL ++G GP V++E+ P G + + + ELA E +PH WFL V+ +DGC RNA HV+Q N L+ +H + +G +S++FQE++ H+ +TLG AGRPGG DFY+++ DNTRNHGPGGQG E DPCFA+VV+G V +++H+ + + + +V I+ M Sbjct: 84 ALSEEKANLERKLQASTPAAAGNMPTTEAMQKRIDNLLKFKQKMKDN--LQKWSKERLL---AKYGPGPHYVVMEVAFDPSSNIYGDGPDTDHITIELASEEDMPHTVLWFLDQVDRRLYDGCSFHRNAGHVIQGGPAPNFLTPPNAGLV------KHFKESGVESVLFQEYSEKHPHVKYTLGYAGRPGGPDFYISMQDNTRNHGPGGQGSYEDPTEADPCFAKVVQGFAVADRIHKSAVQEGSYKRMQHYVAIKTM 330
BLAST of EWM30557.1 vs. NCBI_GenBank
Match: gi|1210517651|dbj|GAX23566.1| (hypothetical protein FisN_14Hh256 [Fistulifera solaris]) HSP 1 Score: 141.354 bits (355), Expect = 1.360e-35 Identity = 86/256 (33.59%), Postives = 137/256 (53.52%), Query Frame = 0 Query: 98 ALTEMEKVLEQKDEALTKA---------EQRLTAMRNTAERLDENQLIQSLRDQNLLFNHLRWGEGPVRVLLELGGSP-----GTVEEAEEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLARVPGAEHGRITGRKSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQGP-----EPDPCFAEVVKGKDVLEKVHQKLTT--GFLKEEDFVLIRRM 332 AL+E + LE+K +A A ++R+ + +++ +N +Q + LL ++G GP V +E+ P G + + + ELA E +PH WFL V+ +DGC RNA HV+Q N L+ +H + +G +S++FQE++ + H+ +TLG AGRPGG DFY+++ DNTRNHGPGGQG E DPCFA+VV+G V +++H+ + + + +V I+ M Sbjct: 84 ALSEEKANLERKLQAPVVAGNTPSTEAMQKRIDNLLKFKQKMKDN--LQKWSKERLL---AKYGAGPHYVDIEVAFDPSSNIYGDGPDTDHITIELASEEDMPHTVLWFLDQVDRRLYDGCSFHRNAGHVIQGGPAPNFLTPPNAGLV------KHFKESGVESVLFQEYSEKYPHVKYTLGYAGRPGGPDFYISMQDNTRNHGPGGQGSYEDPTEADPCFAKVVQGFAVADRIHKSAVQEGSYKRMQHYVAIKTM 328
BLAST of EWM30557.1 vs. NCBI_GenBank
Match: gi|1072237187|gb|OEU21914.1| (hypothetical protein FRACYDRAFT_232060 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 136.732 bits (343), Expect = 5.115e-33 Identity = 91/274 (33.21%), Postives = 139/274 (50.73%), Query Frame = 0 Query: 80 ELYRLHDQRSEELARSRKALTEMEKVLEQ----KDEALTKAEQRLTAMRNTAERLDENQLIQSLRDQNLLFNHLRWGEGP--VRVLLELGGSPGTVEEAEEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLARVPGAEHGRITGRKSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQG-----PEPDPCFAEVVKGKDVLEKVHQKLTTG--FLKEEDFVLIRRMLIKGEEKG 340 EL L+ Q +E R + ++ K L+Q + E L + T + +++ EN IQ + L+ R+G GP V ++++ G ++ + ELAP E +PH +WFL V+ +DGC RNA HV+Q +P L R A G I+FQE++P+ H+ F+LG +GRPGG DFY+++ DN++ HGPGGQ E D CFA+VV G DV+E++H+ T + E + I M I + G Sbjct: 186 ELIILNQQLKDEKNRLEFQMKDVSKELQQHYEGQIEILNRHNDHFTTYK---KKMQEN--IQLMSRSALI---ERYGLGPHFVEMIVQFDSHMGRDDQGSII-VELAPVEDMPHAVYWFLEQVQRKLYDGCSFHRNAAHVIQAGPASNFLSPPDPQLSKRFKDA------GFDKILFQEYSPNSPHVKFSLGYSGRPGGPDFYISMQDNSKIHGPGGQNNFEDPEEADTCFAKVVNGFDVVERIHKSPTKKGEYHAMESNIAIVSMTIMKKNDG 444
BLAST of EWM30557.1 vs. NCBI_GenBank
Match: gi|1210513093|dbj|GAX27909.1| (hypothetical protein FisN_21Hh259 [Fistulifera solaris]) HSP 1 Score: 118.242 bits (295), Expect = 4.854e-26 Identity = 85/264 (32.20%), Postives = 125/264 (47.35%), Query Frame = 0 Query: 62 LLHERDDAFKSEKLKWSNELYRLHDQRSEELARSRKALTEMEKVLEQKDEALTKAE--QRLTAMRNTAERLDENQLIQSLRDQNLLFNHLRWGEGPVRVLLELGGS-PGTVEEAEEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLARVPGAEHGRITGRKSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQGPE-----PDPCFAEVVKGKDVLEKVHQKLT 317 + +E A + + K NEL + D S +A E+++++ +++ + E Q+ T R +A + E ++G GP +V E G PG V+E V ELAP ++PH TH FL V G WD N PH++Q + P R + +S+ F E++ D+ H P+TLG GRPGG DFY+N VDN+ HGPGGQ DPCF +V+KG D LE + + T Sbjct: 198 IANEHKIALERDNRKLQNELKEMKDHY-----ESPEAHEELDRIIAREEGWIKHVEVLQKRT-QRESARSVQE-----------------KFGHGPYQV--EFGVLLPGQVDENYFV-IELAPLSVMPHATHIFLEQVSHGLWDKAWFYINGPHIMQVGPQPDGMTEEMPLEELRELALRPFKEKALESLAFPEYSDDYAHEPWTLGFTGRPGGPDFYINKVDNSEAHGPGGQYQHDLEEFADPCFGKVIKGFDTLENIARTQT 435
BLAST of EWM30557.1 vs. NCBI_GenBank
Match: gi|397568509|gb|EJK46173.1| (hypothetical protein THAOC_35172 [Thalassiosira oceanica]) HSP 1 Score: 118.627 bits (296), Expect = 6.245e-26 Identity = 83/236 (35.17%), Postives = 120/236 (50.85%), Query Frame = 0 Query: 101 EMEKVLEQKDEALTKAEQRLTAMRNTAERLDENQLIQSLRDQNLLFNHLRW-GEGPVRVLLELG------GSPGTVEEAEEV----EFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLARVPGAEHGRITGR-KSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQG-----PEPDPCFAEVVKGKDVLEKVHQKLTTG 319 E+EK +E DE + R A+ + + L E+ +S R+ L W G GP V LE+ P ++ V E ELAP + +P + FL V WDGC + NA H+LQ R A + A +P + G+ + FQE++ DF H +TLG AGRPGG DFYVN +DN+ NHGPGGQG E DP F +V+G ++++++++ T G Sbjct: 281 EIEK-MESLDEYEEYVQMREDALWDKIDALVESMSAESRREA------LEWFGPGPHHVQLEIEYPRWSEDGPSEPDDWPRVRGVLEIELAPIQAMPIAVNLFLQQVHHKLWDGCVFVINAMHILQAGPH-RFAPDNDGYYDANIPELMDRFVDGKLDKMPFQEYSKDFPHEQYTLGFAGRPGGPDFYVNKIDNSVNHGPGGQGHHDLHVEADPSFGRIVRGVEIIQELNRIPTDG 508
BLAST of EWM30557.1 vs. NCBI_GenBank
Match: gi|1210516472|dbj|GAX24639.1| (hypothetical protein FisN_21Lh259 [Fistulifera solaris]) HSP 1 Score: 117.857 bits (294), Expect = 7.649e-26 Identity = 69/174 (39.66%), Postives = 91/174 (52.30%), Query Frame = 0 Query: 150 RWGEGPVRVLLELGGS-PGTVEEAEEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLARVPGAEHGRITGRKSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQGPE-----PDPCFAEVVKGKDVLEKVHQKLT 317 ++G GP +V E G PG V+E V ELAP ++PH TH FL V G WD N PH++Q + P R + +S+ F E++ D+ H P+TLG GRPGG DFY+N VDN+ HGPGGQ DPCF +V+KG D LE + + T Sbjct: 268 KFGHGPYQV--EFGVLLPGQVDENYFV-IELAPLSVMPHATHIFLEQVSHGLWDKAWFYINGPHIMQVGPQPDGMTEEMPLEELRELALRPFKEKALESLAFPEYSDDYAHEPWTLGFTGRPGGPDFYINKVDNSEAHGPGGQYQHDLEEFADPCFGKVIKGFDTLENIAKTQT 438
BLAST of EWM30557.1 vs. NCBI_GenBank
Match: gi|223993599|ref|XP_002286483.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977798|gb|EED96124.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 111.694 bits (278), Expect = 2.101e-23 Identity = 72/211 (34.12%), Postives = 108/211 (51.18%), Query Frame = 0 Query: 150 RWGEGP--VRVLLELGGSPGTVEEAEEVEFELAPFELLPHVTHWFLTLVETGFWD--GCHLIRNAPHVLQ---FNCRGRTAVSGNPSLLARVPGAEHGRI--TGRKSIVFQEFAPDFNHLPFTLGVAGRP-GGEDFYVNLVDNTRNHGPGGQGP--------------------------EPDPCFAEVVKGKDVLEKVHQKLTTGFLKEE 324 R+G GP V ++++L E+ E+ ELAP +L+PH H FL+ +E G+W ++ NA HVLQ C ++ GN PG + + G S+ FQE+ P + H +T+G+AGRP G +FY+NL++NT +HG Q EPDPCF +VVKG DV++K+ +++T L EE Sbjct: 436 RFGAGPHLVSIIVDLDDEQS---ESNEIVLELAPLDLMPHTIHLFLSQIEEGYWSRGTPAIVINAGHVLQACPHPCLESVSLGGN------YPGDPYHDMKHAGLDSVSFQEYHPSYPHEKYTIGLAGRPHSGPEFYINLLNNTLDHGTVEQRKQELGDGYADYLKAAMEGEDGLDEKVMEPDPCFGKVVKGFDVVDKIAERITRASLPEE 637
BLAST of EWM30557.1 vs. NCBI_GenBank
Match: gi|397643900|gb|EJK76147.1| (hypothetical protein THAOC_02105 [Thalassiosira oceanica]) HSP 1 Score: 108.612 bits (270), Expect = 1.917e-22 Identity = 73/258 (28.29%), Postives = 126/258 (48.84%), Query Frame = 0 Query: 86 DQRSEELARSRKALTEMEKVLEQKDEALTKAEQRLTAMRNTAERLDENQLIQSLRDQNLLFNHLRWGEGP--VRVLLELGGSPGT---------VEEAEEVEFELAPFELLPHVTHWFLTLVETGFWDGCHLIRNAPHVLQFNCRGRTAVSGNPSLLA-RVPGAEHGRITGR-----------KSIVFQEFAPDFNHLPFTLGVAGRPGGEDFYVNLVDNTRNHGPGGQG------PEPDPCFAEV--VKGKDVLEKV 312 D EL + + + ++E KDE ++R A+ + L++ S R+ F G GP V + +E +P + +A+ + +LAP +++PH + FL V G W+GCH+ +N+ H++QF +P+ + R P + G+ + +QE++ D+ H+ +T+G+AGRP G DFY+N +DN+ HGPGGQ E DPCF +V VK ++L+++ Sbjct: 251 DHAKNELEDRIEDTAKYKAMVEGKDEVEQYMKKREEALWKRIDVLEKRVGQNSWREAEEWF-----GSGPHKVELTIEYPKAPSADNTDASTWPMTQAKLI-IDLAPLDMMPHTVNLFLQQVHHGLWEGCHVSKNSNHIVQFGPS--YDDKDHPAFIEERRPQHDGENFEGKTHYSYFYDYSLDKVTYQEYSKDYPHIQYTVGMAGRPSGPDFYINKIDNSMIHGPGGQTNRDDFHNEADPCFGKVIDVKSLEILKEI 500 The following BLAST results are available for this feature:
BLAST of EWM30557.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|