EWM30669.1, cds8 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|585113365|gb|EWM30669.1| (hypothetical protein Naga_100091g8 [Nannochloropsis gaditana]) HSP 1 Score: 697.582 bits (1799), Expect = 0.000e+0 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
Query: 1 MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRIALTVWVSDRQSREFVQNK 340
MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRIALTVWVSDRQSREFVQNK
Sbjct: 1 MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRIALTVWVSDRQSREFVQNK 340
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|553191982|ref|XP_005855493.1| (egl nine 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|553192892|ref|XP_005855665.1| egl nine 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293397|gb|EKU20697.1| egl nine 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293568|gb|EKU20868.1| egl nine 1-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
Query: 1 MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRI 322
MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRI
Sbjct: 8 MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRI 329
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|219124557|ref|XP_002182567.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405913|gb|EEC45854.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 96.2857 bits (238), Expect = 5.602e-19 Identity = 86/319 (26.96%), Postives = 126/319 (39.50%), Query Frame = 0
Query: 49 RALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGD-------GAFAVNANDDSSVRLDSVTWV-----TGEEAGT--------------------------GPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRIALTVWVS 329
R L +VVI+ ++ L A+++++ ++G G FA + ND VR D + WV + +EA T G L +++ +L+G+ + + V QLA Y G+G A Y HLD SV+ LG+ WLR YRER IT ILYLN+ + + GG LRC++ + T R +D +P P DV P GG +V+F SG V H+VLPS + +R ALT WV+
Sbjct: 65 RELETKGIVVIENAVTATTLRGARSNIRDFQKEGSIWTNTRVGGFAPSGND-PDVRQDLIAWVRSSNVSDDEASTRSHHVETQGSLLIVQDKNNRQENSPLGKDLLYSIQILRGIPFALEQCGYSASKNHRVPRQCQLAMYPGNGSASYERHLDQCDASVYDLGILEWLRLSDYRERAITTILYLNEPN-RPESHGGALRCWVARDI----------------DTKRDNKNRNEKDDFRP--------------------------------------PFDVKPTGGTMVIFQSGKVDHKVLPSTE---ERFALTNWVA 324
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|223997536|ref|XP_002288441.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975549|gb|EED93877.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 83.1889 bits (204), Expect = 2.279e-14 Identity = 65/205 (31.71%), Postives = 90/205 (43.90%), Query Frame = 0
Query: 49 RALRRGHVVVIDPVMSDQELLAAQNDV------KALLR-------------QGDGAFAVNANDDSSVRLDSVTWV-------TGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPS 227
R L R +VVI +S + L+ A+ D+ K + +G G ++ D VR D V+W+ EE+ G L H + L++G A +R V QLA Y GDG+ YA HLD S+ LGL + R +R R IT ILYLND + GG L+C+L GG D+ S
Sbjct: 93 RTLERDGIVVIPNALSAKSLIDARADLARYASKKHMFERSGVGGNETMPIGEGSGNGSLIDGDGDLVRNDIVSWLRPNRSIDESEESDIGASLAHCIDLIRGAAFSLNRFDYADSHSHQVPLQCQLAMYKGDGKCGYARHLDRCDSSLQELGLLEYFRLSDFRGRAITVILYLNDASRTEE-DGGALKCWLKQTRIVGGDLDESS 296
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|397618464|gb|EJK64904.1| (hypothetical protein THAOC_14308 [Thalassiosira oceanica]) HSP 1 Score: 81.6481 bits (200), Expect = 1.438e-13 Identity = 60/156 (38.46%), Postives = 82/156 (52.56%), Query Frame = 0
Query: 62 VMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEA----GTGPGLKHAVALLKGLAHEFSRTPEYSKSVLF-VQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCY 212
+ D +L A+ +VKAL + + +D+SVR D + V + G L H + LL+G+ + + EYSKS F V QL+ YA DG + Y HLD ++ +GL WLRA YR R ITAILYLN +DWD GG LR +
Sbjct: 122 LTDDVDLRYARENVKALRSHMEKSV-----NDTSVRQDMILSVREGDHLDGRDHGDALVHCIRLLRGIPYLLGKF-EYSKSHSFIVPRQCQLSQYAPDG-SIYVRHLDRCNSTLQEMGLLGWLRASDYRGRVITAILYLNARDWDG---GGELRLF 267
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|831272681|ref|XP_012675791.1| (PREDICTED: egl nine homolog 1-like [Clupea harengus]) HSP 1 Score: 65.4698 bits (158), Expect = 3.407e-8 Identity = 54/187 (28.88%), Postives = 78/187 (41.71%), Query Frame = 0
Query: 39 PFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQG---DGAFAVNANDDSS-VRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSR--TPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQ 219
P +A I + + + V+D + ++ L DVKAL + G DG +D S +R D +TW+ G E G +A L + R + ++ ++ A +ACY GDG Y H+D R +T I YLN KDWDA GG LR + P AQ
Sbjct: 155 PQRLAMEYIVPCMNKHGICVVDNFIGEETGLNILEDVKALHQSGKFTDGQLVSQKSDSSKDIRGDKITWIEGREPGC-----EKIAFLMSRMDDLVRHCNGKLGNYIINGRTKAMVACYPGDGTG-YVRHVDNPNGDG----------------RCVTCIYYLN-KDWDAKDHGGLLRIF-PEGKAQ 317
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|928026181|ref|XP_013861363.1| (PREDICTED: egl nine homolog 1 [Austrofundulus limnaeus]) HSP 1 Score: 64.3142 bits (155), Expect = 6.136e-8 Identity = 55/190 (28.95%), Postives = 81/190 (42.63%), Query Frame = 0
Query: 39 PFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQG---DGAFAVNANDDSS-VRLDSVTWVTGEEAGTGPGLKHAVALLKG-----LAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQ 219
P +A I + R + V+D + + L+ +VKAL R G DG +D + +R D +TW+ G+EAG + L G + H + YS + ++ A +ACY G+G Y H+D R +T I YLN KDW+A GG LR + P AQ
Sbjct: 131 PQRLATECIVPCMNRHGICVVDSFLGSESGLSVLENVKALYRTGRFTDGQLVSQKSDSTKDIRGDKITWIEGKEAGC-----EKIQFLMGRMDDIIRHCNGKLGNYS---INGRTKAMVACYPGNGTG-YVRHVDNPNGDG----------------RCVTCIYYLN-KDWNAKEHGGLLRIF-PEGKAQ 293
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|351708637|gb|EHB11556.1| (Egl nine-like protein 1, partial [Heterocephalus glaber]) HSP 1 Score: 62.3882 bits (150), Expect = 1.464e-7 Identity = 54/191 (28.27%), Postives = 81/191 (42.41%), Query Frame = 0
Query: 38 RPFP---IAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQG---DGAFAVNANDDSS-VRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSR--TPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQ 219
+P P +A I R + + + V+D + + ++V+AL G DG +D S +R D +TWV G+E G + LL + R + + ++ A +ACY G+G Y H+D R +T I YLN KDWDA +SGG LR + P AQ
Sbjct: 22 KPLPALKLALEYIVRCMNKHGICVVDDFLGRETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDQITWVEGKEPGC-----ETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTG-YVRHVDNPNGD----------------GRCVTCIYYLN-KDWDAKVSGGILRIF-PEGKAQ 188
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|507687809|ref|XP_004712264.1| (PREDICTED: egl nine homolog 1 [Echinops telfairi]) HSP 1 Score: 62.7734 bits (151), Expect = 1.669e-7 Identity = 53/191 (27.75%), Postives = 81/191 (42.41%), Query Frame = 0
Query: 38 RPFP---IAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQG---DGAFAVNANDDSS-VRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSR--TPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQ 219
+P P +A I + + + V+D + + L +V+AL G DG +D S +R D +TW+ G+E+G + LL + R + + ++ A +ACY G+G Y H+D R +T I YLN KDWDA +SGG LR + P AQ
Sbjct: 94 KPLPALKLALEYIVPCMNKHGICVVDDFLGQETGLQISEEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKESGC-----ETIGLLMSSMDDLIRHCNGKLGNYKINGRTKAMVACYPGNGTG-YVRHVDNPNGD----------------GRCVTCIYYLN-KDWDAKVSGGILRIF-PEGKAQ 260
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|1117412477|ref|XP_019382270.1| (PREDICTED: egl nine homolog 1, partial [Gavialis gangeticus]) HSP 1 Score: 62.003 bits (149), Expect = 1.918e-7 Identity = 53/187 (28.34%), Postives = 78/187 (41.71%), Query Frame = 0
Query: 39 PFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQG---DGAFAVNANDDSS-VRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSR--TPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQ 219
P +A I + + + V+D + + +V+AL G DG +D S +R D +TWV G+E G H + LL + R + + ++ A +ACY G+G Y H+D R +T I YLN KDWDA +SGG LR + P AQ
Sbjct: 20 PQRLALEYIVPCMNKHGICVVDEFLGKEVGGRVAQEVRALHHTGRFTDGQLVSQKSDSSKDIRGDKITWVEGKEPGC-----HTIGLLMNSMDDLIRHCNGKLGDYKINGRTKAMVACYPGNGTG-YVRHVDNPNGD----------------GRCVTCIYYLN-KDWDAKVSGGILRIF-PEGKAQ 182 The following BLAST results are available for this feature:
BLAST of EWM30669.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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