EWM30669.1, cds8 (CDS) Nannochloropsis gaditana

Overview
NameEWM30669.1
Unique Namecds8
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:23528..24550 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30669.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100091g8.5718.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:23528..24550 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0003824catalytic activity
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0016491oxidoreductase activity
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0031418L-ascorbic acid binding
GO:0005506iron ion binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR006620Pro_4_hyd_alph
Homology
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|585113365|gb|EWM30669.1| (hypothetical protein Naga_100091g8 [Nannochloropsis gaditana])

HSP 1 Score: 697.582 bits (1799), Expect = 0.000e+0
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
Query:    1 MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRIALTVWVSDRQSREFVQNK 340
            MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRIALTVWVSDRQSREFVQNK
Sbjct:    1 MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRIALTVWVSDRQSREFVQNK 340          
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|553191982|ref|XP_005855493.1| (egl nine 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|553192892|ref|XP_005855665.1| egl nine 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293397|gb|EKU20697.1| egl nine 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293568|gb|EKU20868.1| egl nine 1-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
Query:    1 MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRI 322
            MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRI
Sbjct:    8 MLAVAGATMGTLVMSAQSEAVCSNPACEAAYEHVRNGRPFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRI 329          
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|219124557|ref|XP_002182567.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405913|gb|EEC45854.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 96.2857 bits (238), Expect = 5.602e-19
Identity = 86/319 (26.96%), Postives = 126/319 (39.50%), Query Frame = 0
Query:   49 RALRRGHVVVIDPVMSDQELLAAQNDVKALLRQGD-------GAFAVNANDDSSVRLDSVTWV-----TGEEAGT--------------------------GPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPSGLGELPATTTSGSRRISQDRSKPKAHAYEICGDHGITALPVSLESDRAKSDDKVSGSLGVMPRDVAPRGGRLVLFDSGAVLHEVLPSYKKGGQRIALTVWVS 329
            R L    +VVI+  ++   L  A+++++   ++G        G FA + ND   VR D + WV     + +EA T                          G  L +++ +L+G+     +    +     V    QLA Y G+G A Y  HLD    SV+ LG+  WLR   YRER IT ILYLN+ +   +  GG LRC++   +                 T      R  +D  +P                                      P DV P GG +V+F SG V H+VLPS +   +R ALT WV+
Sbjct:   65 RELETKGIVVIENAVTATTLRGARSNIRDFQKEGSIWTNTRVGGFAPSGND-PDVRQDLIAWVRSSNVSDDEASTRSHHVETQGSLLIVQDKNNRQENSPLGKDLLYSIQILRGIPFALEQCGYSASKNHRVPRQCQLAMYPGNGSASYERHLDQCDASVYDLGILEWLRLSDYRERAITTILYLNEPN-RPESHGGALRCWVARDI----------------DTKRDNKNRNEKDDFRP--------------------------------------PFDVKPTGGTMVIFQSGKVDHKVLPSTE---ERFALTNWVA 324          
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|223997536|ref|XP_002288441.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975549|gb|EED93877.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 83.1889 bits (204), Expect = 2.279e-14
Identity = 65/205 (31.71%), Postives = 90/205 (43.90%), Query Frame = 0
Query:   49 RALRRGHVVVIDPVMSDQELLAAQNDV------KALLR-------------QGDGAFAVNANDDSSVRLDSVTWV-------TGEEAGTGPGLKHAVALLKGLAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQGGMHDKPS 227
            R L R  +VVI   +S + L+ A+ D+      K +               +G G  ++   D   VR D V+W+         EE+  G  L H + L++G A   +R          V    QLA Y GDG+  YA HLD    S+  LGL  + R   +R R IT ILYLND     +  GG L+C+L      GG  D+ S
Sbjct:   93 RTLERDGIVVIPNALSAKSLIDARADLARYASKKHMFERSGVGGNETMPIGEGSGNGSLIDGDGDLVRNDIVSWLRPNRSIDESEESDIGASLAHCIDLIRGAAFSLNRFDYADSHSHQVPLQCQLAMYKGDGKCGYARHLDRCDSSLQELGLLEYFRLSDFRGRAITVILYLNDASRTEE-DGGALKCWLKQTRIVGGDLDESS 296          
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|397618464|gb|EJK64904.1| (hypothetical protein THAOC_14308 [Thalassiosira oceanica])

HSP 1 Score: 81.6481 bits (200), Expect = 1.438e-13
Identity = 60/156 (38.46%), Postives = 82/156 (52.56%), Query Frame = 0
Query:   62 VMSDQELLAAQNDVKALLRQGDGAFAVNANDDSSVRLDSVTWVTGEEA----GTGPGLKHAVALLKGLAHEFSRTPEYSKSVLF-VQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCY 212
            +  D +L  A+ +VKAL    + +      +D+SVR D +  V   +       G  L H + LL+G+ +   +  EYSKS  F V    QL+ YA DG + Y  HLD    ++  +GL  WLRA  YR R ITAILYLN +DWD    GG LR +
Sbjct:  122 LTDDVDLRYARENVKALRSHMEKSV-----NDTSVRQDMILSVREGDHLDGRDHGDALVHCIRLLRGIPYLLGKF-EYSKSHSFIVPRQCQLSQYAPDG-SIYVRHLDRCNSTLQEMGLLGWLRASDYRGRVITAILYLNARDWDG---GGELRLF 267          
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|831272681|ref|XP_012675791.1| (PREDICTED: egl nine homolog 1-like [Clupea harengus])

HSP 1 Score: 65.4698 bits (158), Expect = 3.407e-8
Identity = 54/187 (28.88%), Postives = 78/187 (41.71%), Query Frame = 0
Query:   39 PFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQG---DGAFAVNANDDSS-VRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSR--TPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQ 219
            P  +A   I   + +  + V+D  + ++  L    DVKAL + G   DG      +D S  +R D +TW+ G E G        +A L     +  R    +    ++  ++ A +ACY GDG   Y  H+D                      R +T I YLN KDWDA   GG LR + P   AQ
Sbjct:  155 PQRLAMEYIVPCMNKHGICVVDNFIGEETGLNILEDVKALHQSGKFTDGQLVSQKSDSSKDIRGDKITWIEGREPGC-----EKIAFLMSRMDDLVRHCNGKLGNYIINGRTKAMVACYPGDGTG-YVRHVDNPNGDG----------------RCVTCIYYLN-KDWDAKDHGGLLRIF-PEGKAQ 317          
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|928026181|ref|XP_013861363.1| (PREDICTED: egl nine homolog 1 [Austrofundulus limnaeus])

HSP 1 Score: 64.3142 bits (155), Expect = 6.136e-8
Identity = 55/190 (28.95%), Postives = 81/190 (42.63%), Query Frame = 0
Query:   39 PFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQG---DGAFAVNANDDSS-VRLDSVTWVTGEEAGTGPGLKHAVALLKG-----LAHEFSRTPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQ 219
            P  +A   I   + R  + V+D  +  +  L+   +VKAL R G   DG      +D +  +R D +TW+ G+EAG        +  L G     + H   +   YS   +  ++ A +ACY G+G   Y  H+D                      R +T I YLN KDW+A   GG LR + P   AQ
Sbjct:  131 PQRLATECIVPCMNRHGICVVDSFLGSESGLSVLENVKALYRTGRFTDGQLVSQKSDSTKDIRGDKITWIEGKEAGC-----EKIQFLMGRMDDIIRHCNGKLGNYS---INGRTKAMVACYPGNGTG-YVRHVDNPNGDG----------------RCVTCIYYLN-KDWNAKEHGGLLRIF-PEGKAQ 293          
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|351708637|gb|EHB11556.1| (Egl nine-like protein 1, partial [Heterocephalus glaber])

HSP 1 Score: 62.3882 bits (150), Expect = 1.464e-7
Identity = 54/191 (28.27%), Postives = 81/191 (42.41%), Query Frame = 0
Query:   38 RPFP---IAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQG---DGAFAVNANDDSS-VRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSR--TPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQ 219
            +P P   +A   I R + +  + V+D  +  +      ++V+AL   G   DG      +D S  +R D +TWV G+E G        + LL     +  R    +     +  ++ A +ACY G+G   Y  H+D                      R +T I YLN KDWDA +SGG LR + P   AQ
Sbjct:   22 KPLPALKLALEYIVRCMNKHGICVVDDFLGRETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDQITWVEGKEPGC-----ETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTG-YVRHVDNPNGD----------------GRCVTCIYYLN-KDWDAKVSGGILRIF-PEGKAQ 188          
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|507687809|ref|XP_004712264.1| (PREDICTED: egl nine homolog 1 [Echinops telfairi])

HSP 1 Score: 62.7734 bits (151), Expect = 1.669e-7
Identity = 53/191 (27.75%), Postives = 81/191 (42.41%), Query Frame = 0
Query:   38 RPFP---IAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQG---DGAFAVNANDDSS-VRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSR--TPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQ 219
            +P P   +A   I   + +  + V+D  +  +  L    +V+AL   G   DG      +D S  +R D +TW+ G+E+G        + LL     +  R    +     +  ++ A +ACY G+G   Y  H+D                      R +T I YLN KDWDA +SGG LR + P   AQ
Sbjct:   94 KPLPALKLALEYIVPCMNKHGICVVDDFLGQETGLQISEEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKESGC-----ETIGLLMSSMDDLIRHCNGKLGNYKINGRTKAMVACYPGNGTG-YVRHVDNPNGD----------------GRCVTCIYYLN-KDWDAKVSGGILRIF-PEGKAQ 260          
BLAST of EWM30669.1 vs. NCBI_GenBank
Match: gi|1117412477|ref|XP_019382270.1| (PREDICTED: egl nine homolog 1, partial [Gavialis gangeticus])

HSP 1 Score: 62.003 bits (149), Expect = 1.918e-7
Identity = 53/187 (28.34%), Postives = 78/187 (41.71%), Query Frame = 0
Query:   39 PFPIAFAAIARALRRGHVVVIDPVMSDQELLAAQNDVKALLRQG---DGAFAVNANDDSS-VRLDSVTWVTGEEAGTGPGLKHAVALLKGLAHEFSR--TPEYSKSVLFVQSAAQLACYAGDGQAFYAPHLDASTESVWTLGLNAWLRARAYRERTITAILYLNDKDWDADLSGGCLRCYLPSALAQ 219
            P  +A   I   + +  + V+D  +  +       +V+AL   G   DG      +D S  +R D +TWV G+E G      H + LL     +  R    +     +  ++ A +ACY G+G   Y  H+D                      R +T I YLN KDWDA +SGG LR + P   AQ
Sbjct:   20 PQRLALEYIVPCMNKHGICVVDEFLGKEVGGRVAQEVRALHHTGRFTDGQLVSQKSDSSKDIRGDKITWVEGKEPGC-----HTIGLLMNSMDDLIRHCNGKLGDYKINGRTKAMVACYPGNGTG-YVRHVDNPNGD----------------GRCVTCIYYLN-KDWDAKVSGGILRIF-PEGKAQ 182          
The following BLAST results are available for this feature:
BLAST of EWM30669.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113365|gb|EWM30669.1|0.000e+0100.00hypothetical protein Naga_100091g8 [Nannochloropsi... [more]
gi|553191982|ref|XP_005855493.1|0.000e+0100.00egl nine 1-like protein, partial [Nannochloropsis ... [more]
gi|219124557|ref|XP_002182567.1|5.602e-1926.96predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|223997536|ref|XP_002288441.1|2.279e-1431.71predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|397618464|gb|EJK64904.1|1.438e-1338.46hypothetical protein THAOC_14308 [Thalassiosira oc... [more]
gi|831272681|ref|XP_012675791.1|3.407e-828.88PREDICTED: egl nine homolog 1-like [Clupea harengu... [more]
gi|928026181|ref|XP_013861363.1|6.136e-828.95PREDICTED: egl nine homolog 1 [Austrofundulus limn... [more]
gi|351708637|gb|EHB11556.1|1.464e-728.27Egl nine-like protein 1, partial [Heterocephalus g... [more]
gi|507687809|ref|XP_004712264.1|1.669e-727.75PREDICTED: egl nine homolog 1 [Echinops telfairi][more]
gi|1117412477|ref|XP_019382270.1|1.918e-728.34PREDICTED: egl nine homolog 1, partial [Gavialis g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8rna8Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications