EWM22663.1, cds7998 (CDS) Nannochloropsis gaditana

Overview
NameEWM22663.1
Unique Namecds7998
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:365145..365317 -
Alignment locationKK037247.1:364968..365048 -
Alignment locationKK037247.1:364757..364825 -
Alignment locationKK037247.1:364415..364637 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22663.1
Productreceptor expression-enhancing protein 6
Orig transcript idgnl|cribi|Naga_100023g7.3979.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:365145..365317 -
KK037247.1supercontigKK037247.1:364968..365048 -
KK037247.1supercontigKK037247.1:364757..364825 -
KK037247.1supercontigKK037247.1:364415..364637 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR004345TB2_DP1_HVA22
Homology
BLAST of EWM22663.1 vs. NCBI_GenBank
Match: gi|585103228|gb|EWM22663.1| (receptor expression-enhancing protein 6 [Nannochloropsis gaditana])

HSP 1 Score: 367.851 bits (943), Expect = 9.319e-129
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
Query:    1 MADQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANASQSSGETDIKKKN 181
            MADQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANASQSSGETDIKKKN
Sbjct:    1 MADQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANASQSSGETDIKKKN 181          
BLAST of EWM22663.1 vs. NCBI_GenBank
Match: gi|1210512312|dbj|GAX28581.1| (hypothetical protein FisN_1Hh629 [Fistulifera solaris] >gi|1210521155|dbj|GAX19903.1| hypothetical protein FisN_1Lh629 [Fistulifera solaris])

HSP 1 Score: 167.548 bits (423), Expect = 1.656e-49
Identity = 80/172 (46.51%), Postives = 117/172 (68.02%), Query Frame = 0
Query:    3 DQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANASQSSGE 174
            D ++ QL  +R  LDKYP  + +E+KT  PKE    G  V++ + ++F  G G L +++GF +PA+ SF+AIE+ +K DD QWLVYWV+++FF+I+E FV ++LYWIPFYYAFKLAFL++   P   GA  +Y+ FLK +L+K ES +DA L  AK  A A  +  + ++ E
Sbjct:    2 DIVQKQLKVVRTRLDKYPVFQEVEDKTGAPKEIVALGLAVVLGVAIIFGMGVGSLSSLVGFCYPAFKSFQAIETKHKGDDTQWLVYWVIFAFFSIMETFVDLLLYWIPFYYAFKLAFLLWAMMPQTKGAKYLYDTFLKDLLKKNESKIDAALAEAKKHAGAMGSEFASATSE 173          
BLAST of EWM22663.1 vs. NCBI_GenBank
Match: gi|1173960133|gb|OQS06293.1| (hypothetical protein THRCLA_01660 [Thraustotheca clavata])

HSP 1 Score: 167.162 bits (422), Expect = 3.376e-49
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 0
Query:    3 DQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANAS 169
            + +  QL K +  L+KYP +  LEE+T V K Y   GA  +V L +L   GAG LCN++GF++PAY SFKAIES +K DD QWL YWVVY  F I+E FV  +L+W+PFYYAFKL FLV+L  P   GAT I+++FL+  L+ +E  +DA +    A++   +A+ S
Sbjct:    2 EHVTAQLEKTKAELNKYPILVQLEEQTGVDKLYLTIGAVGIVLLIVLVGFGAGLLCNLVGFVYPAYASFKAIESESKADDVQWLTYWVVYCCFEIVEVFVDYLLFWVPFYYAFKLGFLVWLFLPSTQGATFIFSHFLQPFLKTHEENIDAAISNIAANSGTVIADIS 168          
BLAST of EWM22663.1 vs. NCBI_GenBank
Match: gi|219112669|ref|XP_002178086.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410971|gb|EEC50900.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 165.236 bits (417), Expect = 1.259e-48
Identity = 79/172 (45.93%), Postives = 117/172 (68.02%), Query Frame = 0
Query:    3 DQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANASQSSGE 174
            D ++ +L  LR  LDKYP ++  E  T VPKE+ V G G+L  +  +F  G   L +++GF++PA+ SF+AIE+ +K DD QWLVYWV+++FF+IIE FV V+LYWIPFY+AFKLAFL++   P   GA  +Y +FLK +L+K ES +D  L  AK ++ +  +  S ++ +
Sbjct:    2 DIVQEKLQVLRTKLDKYPVLQQAESTTSVPKEFLVLGGGLLFAVLTVFGIGIASLTSLVGFVYPAFKSFQAIETKSKGDDTQWLVYWVIFAFFSIIEVFVDVLLYWIPFYFAFKLAFLLWAMLPQTKGAKFLYESFLKDLLKKNESKIDQALANAKKNSGSFASEFSNAASD 173          
BLAST of EWM22663.1 vs. NCBI_GenBank
Match: gi|470323323|ref|XP_004349466.1| (receptor accessory protein 5 [Capsaspora owczarzaki ATCC 30864] >gi|765550978|gb|KJE91599.1| receptor accessory protein 5 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 163.696 bits (413), Expect = 3.044e-48
Identity = 80/176 (45.45%), Postives = 118/176 (67.05%), Query Frame = 0
Query:    1 MADQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANASQSSGETD 176
            M DQ+KL L KL   L+KYP M  L+++T VPK Y   G  +L+ L L    GA  +CN++GF++PAY SFKAIES NK+DD QWL YWVV++FF+++E F  +IL+W+PFYY  K  FLVYL  P  NGA  +Y N ++  L + ++ +D  +   + +A +A ++A Q++ +T+
Sbjct:    1 MGDQVKLYLDKLDAELNKYPFMIRLQDQTKVPKAYLAIGGFLLILLSLSAGLGAQLVCNIVGFVYPAYASFKAIESTNKDDDTQWLTYWVVFAFFSLLEFFSDIILHWLPFYYLMKFVFLVYLMLPTLNGAAQLYQNVIRRFLLQNQADIDHGISKVRGAATSAASSAVQNANKTE 176          
BLAST of EWM22663.1 vs. NCBI_GenBank
Match: gi|813119586|ref|XP_012196314.1| (hypothetical protein SPRG_02348 [Saprolegnia parasitica CBS 223.65] >gi|641538826|gb|KDO32647.1| hypothetical protein SPRG_02348 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 161.77 bits (408), Expect = 5.287e-47
Identity = 82/167 (49.10%), Postives = 113/167 (67.66%), Query Frame = 0
Query:    3 DQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANAS 169
            DQ+  QL K +  L+KYP +  LE +T V K Y       L+ L +L   GAG LCN++GF++PAY SFKAIES +K DD QWL YWVVY  F I+E FV  +L+W+PFYYAFKL FLV+L  P   GAT I+N+FL+  L+ +E+ +DA +D  K+++ + +A+ S
Sbjct:   19 DQVNAQLEKAKAELNKYPILVQLEAQTGVDKLYLTVAGVALLLLVVLVGFGAGLLCNLVGFVYPAYASFKAIESDSKNDDVQWLTYWVVYCCFEIVEVFVDYLLFWVPFYYAFKLGFLVWLFLPSTQGATFIFNHFLQPFLKSHEANIDAAIDNIKSNSGSVIADIS 185          
BLAST of EWM22663.1 vs. NCBI_GenBank
Match: gi|669157120|ref|XP_008614122.1| (hypothetical protein SDRG_09934 [Saprolegnia diclina VS20] >gi|530734379|gb|EQC32621.1| hypothetical protein SDRG_09934 [Saprolegnia diclina VS20])

HSP 1 Score: 160.614 bits (405), Expect = 8.861e-47
Identity = 81/167 (48.50%), Postives = 114/167 (68.26%), Query Frame = 0
Query:    3 DQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANAS 169
            DQ+  QL K +  L+KYP +  LE +T V K Y    +  L+ L +L   GAG LCN++GF++PAY SFKAIES +K+DD QWL YWVVY  F I+E FV  +L+W+PFYYAFKL FLV+L  P   GAT I+ +FL+  L+ +E+ +DA +D  K+++ + +A+ S
Sbjct:    2 DQVNAQLEKAKAELNKYPILVQLEAQTGVDKLYLTAASVALLLLVVLVGFGAGLLCNLVGFVYPAYASFKAIESESKQDDVQWLTYWVVYCCFEIVEVFVDYLLFWVPFYYAFKLGFLVWLFLPSTQGATFIFTHFLQPFLKSHEANIDAAIDNIKSNSGSVIADIS 168          
BLAST of EWM22663.1 vs. NCBI_GenBank
Match: gi|1072230887|gb|OEU15620.1| (TB2_DP1_HVA22-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 159.073 bits (401), Expect = 3.564e-46
Identity = 81/180 (45.00%), Postives = 112/180 (62.22%), Query Frame = 0
Query:    5 IKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYE---STVDAHLDAAKASAAAAVANASQSSGETDIKKKN 181
            ++  L+ LR+ LD+ PA++ +E K  VPKEY V     L  + + F  GA  LC+ IGF+FPAY +  AIE  NK DD QWLVYW++YSFF++IE F   ILYWIPFY+AFKLAFL++   P   GA L+Y++FLK  L++     S +D  +  AK SA    +    +    D+ KK+
Sbjct:   12 VQENLALLRVKLDQIPALQDVENKLKVPKEYLVIAGTFLFVVLVFFGIGANTLCSFIGFMFPAYQTILAIEKKNKGDDTQWLVYWILYSFFSVIETFQDFILYWIPFYFAFKLAFLLWAMLPQTRGAKLLYDSFLKDFLKRSSNSMSRIDTAMQEAKKSADTTTSELVDNVA--DLSKKD 189          
BLAST of EWM22663.1 vs. NCBI_GenBank
Match: gi|1173948258|gb|OQR96400.1| (hypothetical protein ACHHYP_15842 [Achlya hypogyna])

HSP 1 Score: 156.762 bits (395), Expect = 2.985e-45
Identity = 82/167 (49.10%), Postives = 114/167 (68.26%), Query Frame = 0
Query:    3 DQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANAS 169
            + ++ QL K +  L+KYP +  LEE+T V K Y   G  VL+ L +L   GAG LCN++GF++PAY SFKAIES +K DD QWL YWVVY  F I+E FV  +L+W+PFYYAFKL FLV+L  P   GAT I+++FL+  L+  E  +DA L+  K+++ + +A+ S
Sbjct:    2 EHVQAQLEKAKAELNKYPILVQLEEQTGVDKVYLTAGGVVLLLLVVLVGFGAGLLCNLVGFVYPAYASFKAIESESKTDDVQWLTYWVVYCCFEIVEVFVDYLLFWVPFYYAFKLGFLVWLFLPSTQGATFIFSHFLQPFLKAQEDNIDAALNNIKSNSGSVIADIS 168          
BLAST of EWM22663.1 vs. NCBI_GenBank
Match: gi|673021624|ref|XP_008864773.1| (hypothetical protein H310_02879 [Aphanomyces invadans] >gi|574479704|gb|ETW06698.1| hypothetical protein H310_02879 [Aphanomyces invadans])

HSP 1 Score: 153.295 bits (386), Expect = 7.371e-44
Identity = 77/167 (46.11%), Postives = 111/167 (66.47%), Query Frame = 0
Query:    3 DQIKLQLSKLRIWLDKYPAMKVLEEKTHVPKEYAVCGAGVLVFLFLLFSNGAGFLCNVIGFLFPAYYSFKAIESPNKEDDKQWLVYWVVYSFFTIIEAFVSVILYWIPFYYAFKLAFLVYLGYPGWNGATLIYNNFLKGVLQKYESTVDAHLDAAKASAAAAVANAS 169
            +Q++    K++  L+K P +   E++T + K Y   G  V++ L +L   GAG LCN++GF++PAY SFKAIES +  DD QWL YWVVYS F I+E FV  +LY+IPFYYAFKL FLV+L  P   GAT ++ +FL+  L+++EST+D  +D  K ++   V + S
Sbjct:    2 EQVQAYADKIKAELNKVPLLVEAEKQTGMDKLYLAAGGSVVLLLVVLLGFGAGLLCNLVGFVYPAYESFKAIESDSSHDDTQWLTYWVVYSMFQIVEVFVDFLLYFIPFYYAFKLGFLVWLFLPSTQGATFLFTHFLQPFLKRHESTIDGAIDNIKNNSGKVVGDLS 168          
The following BLAST results are available for this feature:
BLAST of EWM22663.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103228|gb|EWM22663.1|9.319e-129100.00receptor expression-enhancing protein 6 [Nannochlo... [more]
gi|1210512312|dbj|GAX28581.1|1.656e-4946.51hypothetical protein FisN_1Hh629 [Fistulifera sola... [more]
gi|1173960133|gb|OQS06293.1|3.376e-4948.50hypothetical protein THRCLA_01660 [Thraustotheca c... [more]
gi|219112669|ref|XP_002178086.1|1.259e-4845.93predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|470323323|ref|XP_004349466.1|3.044e-4845.45receptor accessory protein 5 [Capsaspora owczarzak... [more]
gi|813119586|ref|XP_012196314.1|5.287e-4749.10hypothetical protein SPRG_02348 [Saprolegnia paras... [more]
gi|669157120|ref|XP_008614122.1|8.861e-4748.50hypothetical protein SDRG_09934 [Saprolegnia dicli... [more]
gi|1072230887|gb|OEU15620.1|3.564e-4645.00TB2_DP1_HVA22-domain-containing protein [Fragilari... [more]
gi|1173948258|gb|OQR96400.1|2.985e-4549.10hypothetical protein ACHHYP_15842 [Achlya hypogyna... [more]
gi|673021624|ref|XP_008864773.1|7.371e-4446.11hypothetical protein H310_02879 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8020rna8020Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications