EWM22659.1, cds7997 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|585103224|gb|EWM22659.1| (hypothetical protein Naga_100023g6 [Nannochloropsis gaditana]) HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
Query: 1 MKDLRASMSVALMTALISTSISSEASAFLYLSSSCPLSSRPQTSCQRSKTRFADKSRNFGRSVLMMVAAASSSNRKKNNSSGLRGNVLRSSSGARRLNDTTAPASGAAFDPHNPFFTSEFGEQELEDNSSTSPETEAEREKRLQEEDEWLLNFSRDDPDSHTETFSDPKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPDPDYPST 322
MKDLRASMSVALMTALISTSISSEASAFLYLSSSCPLSSRPQTSCQRSKTRFADKSRNFGRSVLMMVAAASSSNRKKNNSSGLRGNVLRSSSGARRLNDTTAPASGAAFDPHNPFFTSEFGEQELEDNSSTSPETEAEREKRLQEEDEWLLNFSRDDPDSHTETFSDPKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPDPDYPST
Sbjct: 1 MKDLRASMSVALMTALISTSISSEASAFLYLSSSCPLSSRPQTSCQRSKTRFADKSRNFGRSVLMMVAAASSSNRKKNNSSGLRGNVLRSSSGARRLNDTTAPASGAAFDPHNPFFTSEFGEQELEDNSSTSPETEAEREKRLQEEDEWLLNFSRDDPDSHTETFSDPKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPDPDYPST 322
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|676395363|ref|XP_009040959.1| (hypothetical protein AURANDRAFT_67233 [Aureococcus anophagefferens] >gi|323448504|gb|EGB04402.1| hypothetical protein AURANDRAFT_67233 [Aureococcus anophagefferens]) HSP 1 Score: 114.005 bits (284), Expect = 1.917e-24 Identity = 70/173 (40.46%), Postives = 92/173 (53.18%), Query Frame = 0
Query: 145 EEDEWLLNFSRDDPDSHTETFSDPKERQS-RARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPD 316
EE+ WL DD D TF + + S A D TV +VA Y+ PIS+V DA+ FG+ PPI+ ARI D++D DQAFALLEA+ D A + D Y L +A E P+A+V C +EGF LP G+ + LR EQY L R G A D + + + D
Sbjct: 136 EENLWL-----DDGDEEALTFGNEQLTLSGEGNAFGDS------TVADVADDYRFPISYVADAILGFGIPPPIRDDARIADILDADQAFALLEAVTSLDAAEVEDAYVAFDLARVAGLLEAPLAEVFAACVDEGFGLPHGVETQLRREQYEALRSRFGFAAYAPDPLDKVYED 297
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|1210521480|dbj|GAX19470.1| (hypothetical protein FisN_19Hh045 [Fistulifera solaris]) HSP 1 Score: 102.834 bits (255), Expect = 6.507e-22 Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 0
Query: 188 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLG 301
T++E+ Y VPI ++ D LC +G PPI R+GD++ G+QAFALLEA++ D A + D Y+ SL ++ EI +A+ Q+ EG++LPFG+ ++LRVEQ L+R LG
Sbjct: 144 TLQEICTDYSVPICYIADVLCMWGTEPPIHVHDRLGDLVTGEQAFALLEAVNSLDVAALQDRYSNQSLWQVCQEWEIDLAQGFQMAMTEGWSLPFGVHTNLRVEQENELIRVLG 257
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|1210524757|dbj|GAX16465.1| (hypothetical protein FisN_19Lh045 [Fistulifera solaris]) HSP 1 Score: 99.7525 bits (247), Expect = 9.048e-21 Identity = 49/114 (42.98%), Postives = 74/114 (64.91%), Query Frame = 0
Query: 188 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLG 301
T++E+ Y VPI ++ D LC + PPI R+GD++ G+QAFALLEA++ D A + D Y+ SL ++ EI +A+ Q+ EG++LPFG+ ++LRVEQ L+R LG
Sbjct: 147 TLQEICTDYSVPICYIADVLCMWRTEPPIHMHDRLGDLVTGEQAFALLEAVNSLDVAALQDRYSNQSLWQVCQEWEIDLAQGFQMAMTEGWSLPFGVHTNLRVEQENELIRVLG 260
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|219116759|ref|XP_002179174.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409065|gb|EEC48997.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 97.0561 bits (240), Expect = 1.013e-19 Identity = 44/111 (39.64%), Postives = 74/111 (66.67%), Query Frame = 0
Query: 188 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMR 298
T+ E+A Y VP+ ++ D LC +GV PIQ R+GD++ G+QAF++LEA++ D + + D Y+ +L +L A ++I + ++ +EG++LPFG+ + LRVEQ L+R
Sbjct: 165 TLNEIATDYGVPVCYLADVLCMWGVPVPIQVHDRLGDLVTGEQAFSILEAINSLDISALHDRYSNHNLIQLCAEYDIELQTAFEMAMKEGWSLPFGVNTCLRVEQSDELVR 275
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|224008482|ref|XP_002293200.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971326|gb|EED89661.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 85.8853 bits (211), Expect = 3.827e-15 Identity = 39/103 (37.86%), Postives = 65/103 (63.11%), Query Frame = 0
Query: 188 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRV 290
T++E+A Y VPI ++ D + +GV PI R+GD++ G+QAF++LEA+H D A + + Y+ D+L + ++I + + G+ALPFG+R+ LRV
Sbjct: 296 TLKEIAMDYSVPICYLADVVAGWGVPVPIDPLGRLGDMVTGEQAFSMLEAIHTLDIAALHERYSEDNLVNICDFYDIDLKEAFDFAMTRGWALPFGVRTFLRV 398
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|298715418|emb|CBJ28029.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 79.7221 bits (195), Expect = 5.019e-13 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 0
Query: 188 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLM 297
++ Y P+ + D LC +GV PI R+GD+ID +QA AL EA+ G D A + D Y DSL +L+ +IP+ + Q C + LP G +H+ +++Y L+
Sbjct: 183 SINNAVFEYGFPVEFFLDMLCRWGVTLPINQDRRLGDMIDAEQAAALCEALTGLDAADVRDNYLDDSLEDLSFDLDIPLPDLFQACAAQKINLPKGGDTHITIDEYKLLL 292
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|1069842531|gb|OEH77928.1| (hypothetical protein cyc_01077 [Cyclospora cayetanensis]) HSP 1 Score: 78.1814 bits (191), Expect = 1.766e-12 Identity = 43/140 (30.71%), Postives = 74/140 (52.86%), Query Frame = 0
Query: 165 FSDPKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQ 304
+D ++++ RA K+ ++E +A + P+ ++GDALC G PI A +GD + A+ L+E +H D +Y +++ +L + +P ++ +C+E GF LPFG + L E YA L +RLG Q
Sbjct: 340 LTDDEKKEKFLRAQKN--GVLSESLESLAARFGFPLDFLGDALCRAGCNTPINPRAPLGDYVHPAAAWGLVELLHVADPNSTIFLYPDETVGDLGHQYSVPFKQMEAICNELGFQLPFGPDTRLNKECYASLTQRLGKMQ 477
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|873232131|emb|CEM06393.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 68.9366 bits (167), Expect = 2.329e-9 Identity = 33/131 (25.19%), Postives = 67/131 (51.15%), Query Frame = 0
Query: 187 LTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPDP 317
T+ E+ Y VP+ ++GD C +G P+ + ++I G+ + L+E +H +D + D+Y + +L ++ + + +VCD+ LPFG+ + + + Y ++ +R+G+ E PDP
Sbjct: 286 FTLMEIHEHYHVPLRFLGDVCCKWGAPAPVPLDVPVKELISGEFVWHLIETVHYFDPFDLDDLYIERDIIDLGRKFKMRTSDLEKVCDQLDIRLPFGVETQVSRDDYIKICKRIGV---------ELPPDP 407
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|544210342|ref|XP_005535572.1| (hypothetical protein CYME_CME057C [Cyanidioschyzon merolae strain 10D] >gi|449015884|dbj|BAM79286.1| hypothetical protein CYME_CME057C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 64.6994 bits (156), Expect = 1.798e-8 Identity = 38/136 (27.94%), Postives = 67/136 (49.26%), Query Frame = 0
Query: 168 PKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFA-LLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGM 302
PK R R ++D + ++ E+A Y VP W+ + L + G+ PI+ + + D+ D L+ +HG + D YT ++L E A + + + ++L E G L G + +R EQ +L +RLG+
Sbjct: 122 PKSRPPDTR----QFDISLYSIAELAEDYHVPPEWLIEVLVDIGLDLPIRLSDTLTDLGASDDDIQELINRLHGVSREDVLDWYTDETLEEYATEYGVDLDEMLAAAAEVGILLSMGPLTRIRREQRTQLFKRLGI 253 The following BLAST results are available for this feature:
BLAST of EWM22659.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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