EWM22659.1, cds7997 (CDS) Nannochloropsis gaditana

Overview
NameEWM22659.1
Unique Namecds7997
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:362751..363719 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22659.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100023g6.3975.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:362751..363719 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|585103224|gb|EWM22659.1| (hypothetical protein Naga_100023g6 [Nannochloropsis gaditana])

HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
Query:    1 MKDLRASMSVALMTALISTSISSEASAFLYLSSSCPLSSRPQTSCQRSKTRFADKSRNFGRSVLMMVAAASSSNRKKNNSSGLRGNVLRSSSGARRLNDTTAPASGAAFDPHNPFFTSEFGEQELEDNSSTSPETEAEREKRLQEEDEWLLNFSRDDPDSHTETFSDPKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPDPDYPST 322
            MKDLRASMSVALMTALISTSISSEASAFLYLSSSCPLSSRPQTSCQRSKTRFADKSRNFGRSVLMMVAAASSSNRKKNNSSGLRGNVLRSSSGARRLNDTTAPASGAAFDPHNPFFTSEFGEQELEDNSSTSPETEAEREKRLQEEDEWLLNFSRDDPDSHTETFSDPKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPDPDYPST
Sbjct:    1 MKDLRASMSVALMTALISTSISSEASAFLYLSSSCPLSSRPQTSCQRSKTRFADKSRNFGRSVLMMVAAASSSNRKKNNSSGLRGNVLRSSSGARRLNDTTAPASGAAFDPHNPFFTSEFGEQELEDNSSTSPETEAEREKRLQEEDEWLLNFSRDDPDSHTETFSDPKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPDPDYPST 322          
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|676395363|ref|XP_009040959.1| (hypothetical protein AURANDRAFT_67233 [Aureococcus anophagefferens] >gi|323448504|gb|EGB04402.1| hypothetical protein AURANDRAFT_67233 [Aureococcus anophagefferens])

HSP 1 Score: 114.005 bits (284), Expect = 1.917e-24
Identity = 70/173 (40.46%), Postives = 92/173 (53.18%), Query Frame = 0
Query:  145 EEDEWLLNFSRDDPDSHTETFSDPKERQS-RARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPD 316
            EE+ WL     DD D    TF + +   S    A  D       TV +VA  Y+ PIS+V DA+  FG+ PPI+  ARI D++D DQAFALLEA+   D A + D Y    L  +A   E P+A+V   C +EGF LP G+ + LR EQY  L  R G A    D + + + D
Sbjct:  136 EENLWL-----DDGDEEALTFGNEQLTLSGEGNAFGDS------TVADVADDYRFPISYVADAILGFGIPPPIRDDARIADILDADQAFALLEAVTSLDAAEVEDAYVAFDLARVAGLLEAPLAEVFAACVDEGFGLPHGVETQLRREQYEALRSRFGFAAYAPDPLDKVYED 297          
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|1210521480|dbj|GAX19470.1| (hypothetical protein FisN_19Hh045 [Fistulifera solaris])

HSP 1 Score: 102.834 bits (255), Expect = 6.507e-22
Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 0
Query:  188 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLG 301
            T++E+   Y VPI ++ D LC +G  PPI    R+GD++ G+QAFALLEA++  D A + D Y+  SL ++    EI +A+  Q+   EG++LPFG+ ++LRVEQ   L+R LG
Sbjct:  144 TLQEICTDYSVPICYIADVLCMWGTEPPIHVHDRLGDLVTGEQAFALLEAVNSLDVAALQDRYSNQSLWQVCQEWEIDLAQGFQMAMTEGWSLPFGVHTNLRVEQENELIRVLG 257          
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|1210524757|dbj|GAX16465.1| (hypothetical protein FisN_19Lh045 [Fistulifera solaris])

HSP 1 Score: 99.7525 bits (247), Expect = 9.048e-21
Identity = 49/114 (42.98%), Postives = 74/114 (64.91%), Query Frame = 0
Query:  188 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLG 301
            T++E+   Y VPI ++ D LC +   PPI    R+GD++ G+QAFALLEA++  D A + D Y+  SL ++    EI +A+  Q+   EG++LPFG+ ++LRVEQ   L+R LG
Sbjct:  147 TLQEICTDYSVPICYIADVLCMWRTEPPIHMHDRLGDLVTGEQAFALLEAVNSLDVAALQDRYSNQSLWQVCQEWEIDLAQGFQMAMTEGWSLPFGVHTNLRVEQENELIRVLG 260          
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|219116759|ref|XP_002179174.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409065|gb|EEC48997.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 97.0561 bits (240), Expect = 1.013e-19
Identity = 44/111 (39.64%), Postives = 74/111 (66.67%), Query Frame = 0
Query:  188 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMR 298
            T+ E+A  Y VP+ ++ D LC +GV  PIQ   R+GD++ G+QAF++LEA++  D + + D Y+  +L +L A ++I +    ++  +EG++LPFG+ + LRVEQ   L+R
Sbjct:  165 TLNEIATDYGVPVCYLADVLCMWGVPVPIQVHDRLGDLVTGEQAFSILEAINSLDISALHDRYSNHNLIQLCAEYDIELQTAFEMAMKEGWSLPFGVNTCLRVEQSDELVR 275          
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|224008482|ref|XP_002293200.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971326|gb|EED89661.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 85.8853 bits (211), Expect = 3.827e-15
Identity = 39/103 (37.86%), Postives = 65/103 (63.11%), Query Frame = 0
Query:  188 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRV 290
            T++E+A  Y VPI ++ D +  +GV  PI    R+GD++ G+QAF++LEA+H  D A + + Y+ D+L  +   ++I + +        G+ALPFG+R+ LRV
Sbjct:  296 TLKEIAMDYSVPICYLADVVAGWGVPVPIDPLGRLGDMVTGEQAFSMLEAIHTLDIAALHERYSEDNLVNICDFYDIDLKEAFDFAMTRGWALPFGVRTFLRV 398          
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|298715418|emb|CBJ28029.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 79.7221 bits (195), Expect = 5.019e-13
Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 0
Query:  188 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLM 297
            ++      Y  P+ +  D LC +GV  PI    R+GD+ID +QA AL EA+ G D A + D Y  DSL +L+   +IP+  + Q C  +   LP G  +H+ +++Y  L+
Sbjct:  183 SINNAVFEYGFPVEFFLDMLCRWGVTLPINQDRRLGDMIDAEQAAALCEALTGLDAADVRDNYLDDSLEDLSFDLDIPLPDLFQACAAQKINLPKGGDTHITIDEYKLLL 292          
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|1069842531|gb|OEH77928.1| (hypothetical protein cyc_01077 [Cyclospora cayetanensis])

HSP 1 Score: 78.1814 bits (191), Expect = 1.766e-12
Identity = 43/140 (30.71%), Postives = 74/140 (52.86%), Query Frame = 0
Query:  165 FSDPKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQ 304
             +D ++++   RA K+       ++E +A  +  P+ ++GDALC  G   PI   A +GD +    A+ L+E +H  D      +Y  +++ +L   + +P  ++  +C+E GF LPFG  + L  E YA L +RLG  Q
Sbjct:  340 LTDDEKKEKFLRAQKN--GVLSESLESLAARFGFPLDFLGDALCRAGCNTPINPRAPLGDYVHPAAAWGLVELLHVADPNSTIFLYPDETVGDLGHQYSVPFKQMEAICNELGFQLPFGPDTRLNKECYASLTQRLGKMQ 477          
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|873232131|emb|CEM06393.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 68.9366 bits (167), Expect = 2.329e-9
Identity = 33/131 (25.19%), Postives = 67/131 (51.15%), Query Frame = 0
Query:  187 LTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPDP 317
             T+ E+   Y VP+ ++GD  C +G   P+     + ++I G+  + L+E +H +D   + D+Y    + +L    ++  + + +VCD+    LPFG+ + +  + Y ++ +R+G+         E  PDP
Sbjct:  286 FTLMEIHEHYHVPLRFLGDVCCKWGAPAPVPLDVPVKELISGEFVWHLIETVHYFDPFDLDDLYIERDIIDLGRKFKMRTSDLEKVCDQLDIRLPFGVETQVSRDDYIKICKRIGV---------ELPPDP 407          
BLAST of EWM22659.1 vs. NCBI_GenBank
Match: gi|544210342|ref|XP_005535572.1| (hypothetical protein CYME_CME057C [Cyanidioschyzon merolae strain 10D] >gi|449015884|dbj|BAM79286.1| hypothetical protein CYME_CME057C [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 64.6994 bits (156), Expect = 1.798e-8
Identity = 38/136 (27.94%), Postives = 67/136 (49.26%), Query Frame = 0
Query:  168 PKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFA-LLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGM 302
            PK R    R    ++D +  ++ E+A  Y VP  W+ + L + G+  PI+ +  + D+   D     L+  +HG     + D YT ++L E A  + + + ++L    E G  L  G  + +R EQ  +L +RLG+
Sbjct:  122 PKSRPPDTR----QFDISLYSIAELAEDYHVPPEWLIEVLVDIGLDLPIRLSDTLTDLGASDDDIQELINRLHGVSREDVLDWYTDETLEEYATEYGVDLDEMLAAAAEVGILLSMGPLTRIRREQRTQLFKRLGI 253          
The following BLAST results are available for this feature:
BLAST of EWM22659.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103224|gb|EWM22659.1|0.000e+0100.00hypothetical protein Naga_100023g6 [Nannochloropsi... [more]
gi|676395363|ref|XP_009040959.1|1.917e-2440.46hypothetical protein AURANDRAFT_67233 [Aureococcus... [more]
gi|1210521480|dbj|GAX19470.1|6.507e-2243.86hypothetical protein FisN_19Hh045 [Fistulifera sol... [more]
gi|1210524757|dbj|GAX16465.1|9.048e-2142.98hypothetical protein FisN_19Lh045 [Fistulifera sol... [more]
gi|219116759|ref|XP_002179174.1|1.013e-1939.64predicted protein, partial [Phaeodactylum tricornu... [more]
gi|224008482|ref|XP_002293200.1|3.827e-1537.86predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|298715418|emb|CBJ28029.1|5.019e-1335.45conserved unknown protein [Ectocarpus siliculosus][more]
gi|1069842531|gb|OEH77928.1|1.766e-1230.71hypothetical protein cyc_01077 [Cyclospora cayetan... [more]
gi|873232131|emb|CEM06393.1|2.329e-925.19unnamed protein product [Vitrella brassicaformis C... [more]
gi|544210342|ref|XP_005535572.1|1.798e-827.94hypothetical protein CYME_CME057C [Cyanidioschyzon... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8019rna8019Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications