EWM22689.1, cds7984 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22689.1 vs. NCBI_GenBank
Match: gi|585103255|gb|EWM22689.1| (Riboflavin synthase-like beta-barrel [Nannochloropsis gaditana]) HSP 1 Score: 657.136 bits (1694), Expect = 0.000e+0 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
Query: 1 MRIFELPTLTLSSPTATSWRRRALHLPSHLPVFLLALILLGLFTTHAFRLPSHVAGGTTSSINRAGSLLAPISSVASAGRRRGKALALFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGATIESLRANIEALQERVAVLEGRGDQG 321
MRIFELPTLTLSSPTATSWRRRALHLPSHLPVFLLALILLGLFTTHAFRLPSHVAGGTTSSINRAGSLLAPISSVASAGRRRGKALALFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGATIESLRANIEALQERVAVLEGRGDQG
Sbjct: 1 MRIFELPTLTLSSPTATSWRRRALHLPSHLPVFLLALILLGLFTTHAFRLPSHVAGGTTSSINRAGSLLAPISSVASAGRRRGKALALFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGATIESLRANIEALQERVAVLEGRGDQG 321
BLAST of EWM22689.1 vs. NCBI_GenBank
Match: gi|219124103|ref|XP_002182351.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406312|gb|EEC46252.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 258.07 bits (658), Expect = 2.317e-82 Identity = 129/227 (56.83%), Postives = 163/227 (71.81%), Query Frame = 0
Query: 88 LFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTV--VTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGATI---ESLRANIEALQE 309
+F+GIVE+MG V + DM +W G G G ELT+ A+ ++ AY GCSI V+GVCLT + Y F VG APETIR T LG L G+ VNLER+ GRNSGH VQGHVD+TGEI++RW + DSL+ K++ +P +L YIV KG+IA+DGTSLTVC+VD E WFTFML+ YTQK IIVP K VGDRVNLEVDVL KY E+++ A I E+L A +E+L++
Sbjct: 1 MFTGIVEEMGEVVSLTQRDDMPLWDGTKGSGTELTVK-ASIMMEGAYLGCSICVSGVCLTATELDYDESIFRVGLAPETIRRTYLGDLKTGDAVNLERASEIGGRNSGHFVQGHVDDTGEIIDRWTDEDSLFFKIKVTPDVLAYIVPKGFIAIDGTSLTVCEVDYQEKWFTFMLVEYTQKKIIVPAKKVGDRVNLEVDVLGKYSENALAALIPRLEALEAKVESLEK 226
BLAST of EWM22689.1 vs. NCBI_GenBank
Match: gi|551642768|ref|XP_005824180.1| (hypothetical protein GUITHDRAFT_158612 [Guillardia theta CCMP2712] >gi|428168253|gb|EKX37200.1| hypothetical protein GUITHDRAFT_158612 [Guillardia theta CCMP2712]) HSP 1 Score: 256.529 bits (654), Expect = 9.021e-82 Identity = 126/214 (58.88%), Postives = 160/214 (74.77%), Query Frame = 0
Query: 88 LFSGIVEQMGRVQKVEMD-KDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGATIESL 300
+F+GIVE+MG +++V+ K W G G GM L + +VL YEGCSIAVNGVCLTV + ++FTVG APETIR TNLG LG G VNLER+ DGRNSGHMVQGHVD GEI+E+WQ+ +SL++KV+A ++ YIV KG+IA+DGTSLTVC+ D GWFTFMLI YTQ+H+I+P K +GD+VNLEVDV++KYVE S+G + L
Sbjct: 1 MFTGIVEEMGAIKEVKNGFKGWGEWEGSDG-GMTLRV-GGGKVLEGCYEGCSIAVNGVCLTVTEFDSESFTVGVAPETIRKTNLGLLGQGSPVNLERAAAMDGRNSGHMVQGHVDNVGEIIEKWQDKESLFIKVKAPRELMQYIVPKGFIAIDGTSLTVCETDVANGWFTFMLIDYTQQHVIIPKKPIGDKVNLEVDVISKYVERSLGNINDRL 212
BLAST of EWM22689.1 vs. NCBI_GenBank
Match: gi|922861756|gb|KOO29469.1| (hypothetical protein Ctob_008069 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 254.603 bits (649), Expect = 3.211e-81 Identity = 129/225 (57.33%), Postives = 162/225 (72.00%), Query Frame = 0
Query: 88 LFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGATIESLRANIEALQERVA 312
+FSGIVE+MG+V K++ + W G G+G EL + +A L A GCSIAVNGVCLTV + F VG APETIR TNL L G+ VN+ER+LPADGRNSGH VQGHVD+ G I E +GDSLWV+VR ++PYIV KG+IA+DGTSLTVC V+ EGWF FMLIA+TQ+ +++P KAVGD VNLEVDVLAKYVE + A + A ++AL+ ++A
Sbjct: 1 MFSGIVEEMGKVSKLDKVPRLKQWDGTVGEGWELEV-EATVALEGASLGCSIAVNGVCLTVTEFDKHKFKVGLAPETIRRTNLERLVPGDPVNVERALPADGRNSGHFVQGHVDDIGIIEELRPDGDSLWVRVRPPARLMPYIVPKGFIAIDGTSLTVCNVNAAEGWFDFMLIAFTQQKVVIPKKAVGDAVNLEVDVLAKYVEQGLKA----VTARLDALEAKLA 220
BLAST of EWM22689.1 vs. NCBI_GenBank
Match: gi|675188121|ref|XP_008902945.1| (riboflavin synthase, alpha subunit [Phytophthora parasitica INRA-310] >gi|568097281|gb|ETN12025.1| riboflavin synthase, alpha subunit [Phytophthora parasitica INRA-310]) HSP 1 Score: 254.218 bits (648), Expect = 1.171e-80 Identity = 124/215 (57.67%), Postives = 152/215 (70.70%), Query Frame = 0
Query: 88 LFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGATIESLRA 302
+F+GI+E++G V ++ D+++W+GE G G EL + L AY GCSIAVNG CLT + D G APET+R TNLG L AG++VN+ERS+ D RNSGH VQGHVD TG IL +E DSLWVK+ A+P IL IV KGYIA+DGTSLTVC+VDR GWF+ MLI+YTQ HII+P K VGDRVNLE DVL KY SMG +E + A
Sbjct: 1 MFTGIIEEIGTVVSMQERNDLLLWNGERGTGFELVVR-VKVALEGAYLGCSIAVNGTCLTATSIDEDRVAFGVAPETLRRTNLGELKAGDKVNVERSMGVDARNSGHFVQGHVDGTGSILSFTREDDSLWVKISATPEILRDIVTKGYIAIDGTSLTVCEVDRTNGWFSIMLISYTQNHIILPLKKVGDRVNLEPDVLGKYAARSMGGVLERVDA 214
BLAST of EWM22689.1 vs. NCBI_GenBank
Match: gi|299116348|emb|CBN76150.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 254.988 bits (650), Expect = 2.087e-80 Identity = 127/226 (56.19%), Postives = 160/226 (70.80%), Query Frame = 0
Query: 77 SAGRRRGKALALFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGATIESLRA 302
+A RR A+FSGIVE+MG V + + + +W G G G+ELT+ A VL A EGCSIAVNGVCLTV ++ D F VG APET+R +NL L AG+ VNLER+LP DGRNSGH VQGHVD G IL + DSL VKV ++ YI KG+IAVDGTSLTVC+V+ E WFTFML+AYTQ+H+++P K+ GD+VNLEVDVL KY+E S+ + ++ L A
Sbjct: 55 TAAGRREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVK-ANTVLEGATEGCSIAVNGVCLTVTSFNDDEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGA 279
BLAST of EWM22689.1 vs. NCBI_GenBank
Match: gi|567965497|gb|ETK90967.1| (riboflavin synthase, alpha subunit [Phytophthora parasitica] >gi|970622796|gb|KUF70772.1| Riboflavin synthase [Phytophthora nicotianae] >gi|970646107|gb|KUF86379.1| hypothetical protein AM588_10002241 [Phytophthora nicotianae]) HSP 1 Score: 251.906 bits (642), Expect = 7.693e-80 Identity = 123/215 (57.21%), Postives = 152/215 (70.70%), Query Frame = 0
Query: 88 LFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGATIESLRA 302
+F+GI+E++G V ++ D+++W+GE G G EL + L AY GCSIAVNG CLT + D G APET+R TNLG L AG++VN+ERS+ D RNSGH VQGHVD TG IL +E DSLWVK+ A+P IL IV KGYIA+DGTSLTVC+VDR GWF+ MLI++TQ HII+P K VGDRVNLE DVL KY SMG +E + A
Sbjct: 1 MFTGIIEEIGTVVSMQERNDLLLWNGERGTGFELVVR-VKVALEGAYLGCSIAVNGTCLTATSIDEDRVAFGVAPETLRRTNLGELKAGDKVNVERSMGVDARNSGHFVQGHVDGTGSILSFTREDDSLWVKISATPEILRDIVTKGYIAIDGTSLTVCEVDRTNGWFSIMLISHTQNHIILPLKKVGDRVNLEPDVLGKYAARSMGGVLERVDA 214
BLAST of EWM22689.1 vs. NCBI_GenBank
Match: gi|1210530960|dbj|GAX10500.1| (riboflavin synthase [Fistulifera solaris]) HSP 1 Score: 250.751 bits (639), Expect = 1.379e-79 Identity = 129/228 (56.58%), Postives = 158/228 (69.30%), Query Frame = 0
Query: 88 LFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGA---TIESLRANIEALQERVA 312
+F+GIVE+MG V +E DM +W G GKG ELT+ A L AY GCSI V+GVCLT DTF VG APET+ T L GE VNLER+ GRNSGH VQGHVD TGEI+E+ + DSLW+KVR SP I+ YIV KG++A+DGTSLTV VDR+E WFTFMLI YTQK IIVP K VG VN+E DVL KY E+++ A +E+L A I +L++++A
Sbjct: 1 MFTGIVEEMGTVVSLEERDDMTLWDGTLGKGTELTVK-ADVALQGAYLGCSICVSGVCLTATALADDTFKVGLAPETLSKTYFKLLKPGELVNLERASVIGGRNSGHNVQGHVDGTGEIIEKRTDKDSLWIKVRTSPEIIRYIVPKGFVAIDGTSLTVVDVDRDENWFTFMLIEYTQKKIIVPGKPVGSLVNIEADVLGKYSENAVAAFLPRLEALEAKIASLEQKLA 227
BLAST of EWM22689.1 vs. NCBI_GenBank
Match: gi|567994208|gb|ETL44369.1| (riboflavin synthase, alpha subunit [Phytophthora parasitica] >gi|568023482|gb|ETL97539.1| riboflavin synthase, alpha subunit [Phytophthora parasitica] >gi|568053888|gb|ETM50698.1| riboflavin synthase, alpha subunit [Phytophthora parasitica] >gi|570331881|gb|ETO79829.1| riboflavin synthase, alpha subunit [Phytophthora parasitica P1976] >gi|570955783|gb|ETP20872.1| riboflavin synthase, alpha subunit [Phytophthora parasitica CJ01A1]) HSP 1 Score: 251.136 bits (640), Expect = 1.721e-79 Identity = 123/215 (57.21%), Postives = 152/215 (70.70%), Query Frame = 0
Query: 88 LFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGATIESLRA 302
+F+GI+E++G V ++ D+++W+GE G G EL + L AY GCSIAVNG CLT + D G APET+R TNLG L AG++VN+ERS+ D RNSGH VQGHVD TG IL +E DSLWVK+ A+P IL IV KGYIA+DGTSLTVC+VDR GWF+ MLI++TQ HII+P K VGDRVNLE DVL KY SMG +E + A
Sbjct: 1 MFTGIIEEIGTVVSMQERNDLLLWNGERGTGFELVVR-VKVALEGAYLGCSIAVNGTCLTATSIDEDRVAFGVAPETLRRTNLGELKAGDKVNVERSMGVDARNSGHFVQGHVDGTGSILSFTREDDSLWVKISATPEILRDIVTKGYIAIDGTSLTVCEVDRTNGWFSIMLISHTQNHIILPLKKVGDRVNLEPDVLGKYAARSMGGVLERVDA 214
BLAST of EWM22689.1 vs. NCBI_GenBank
Match: gi|1210524498|dbj|GAX16756.1| (riboflavin synthase [Fistulifera solaris]) HSP 1 Score: 250.366 bits (638), Expect = 2.300e-79 Identity = 128/228 (56.14%), Postives = 158/228 (69.30%), Query Frame = 0
Query: 88 LFSGIVEQMGRVQKVEMDKDMVMWSGETGKGMELTITDAARVLADAYEGCSIAVNGVCLTVVTYTGDTFTVGCAPETIRCTNLGGLGAGERVNLERSLPADGRNSGHMVQGHVDETGEILERWQEGDSLWVKVRASPAILPYIVEKGYIAVDGTSLTVCQVDRNEGWFTFMLIAYTQKHIIVPHKAVGDRVNLEVDVLAKYVEHSMGA---TIESLRANIEALQERVA 312
+F+GIVE+MG V +E +DM +W G GKG ELT+ A L AY GCSI V+GVCLT DTF VG APET+ T L GE VNLER+ GRNSGH VQGHVD TGEI+E+ + DSLW+KVR SP I+ YIV KG++A+DGTSLTV V+R E WFTFMLI YTQK IIVP K VG VN+E DVL KY E+++ A +E+L A I +L++++A
Sbjct: 1 MFTGIVEEMGTVVSLEEREDMTLWDGTLGKGTELTV-KADVALQGAYLGCSICVSGVCLTATALADDTFKVGLAPETLSKTYFKSLKPGELVNLERASVIGGRNSGHNVQGHVDGTGEIIEKRTDKDSLWIKVRTSPEIIRYIVPKGFVAIDGTSLTVVDVNREENWFTFMLIEYTQKKIIVPGKPVGSLVNIEADVLGKYSENAVAAFLPRLEALEAKIASLEQKLA 227 The following BLAST results are available for this feature:
BLAST of EWM22689.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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