EWM22695.1, cds7980 (CDS) Nannochloropsis gaditana

Overview
NameEWM22695.1
Unique Namecds7980
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:328044..328124 +
Alignment locationKK037247.1:328309..328962 +
Alignment locationKK037247.1:329061..329178 +
Alignment locationKK037247.1:329327..329340 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22695.1
Productchaperone protein
Orig transcript idgnl|cribi|Naga_100340g1.5991.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:328044..328124 +
KK037247.1supercontigKK037247.1:328309..328962 +
KK037247.1supercontigKK037247.1:329061..329178 +
KK037247.1supercontigKK037247.1:329327..329340 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0051082unfolded protein binding
Vocabulary: INTERPRO
TermDefinition
IPR008971HSP40/DnaJ_pept-bd
IPR018253DnaJ_domain_CS
IPR001623DnaJ_domain
Homology
BLAST of EWM22695.1 vs. NCBI_GenBank
Match: gi|585103263|gb|EWM22695.1| (chaperone protein [Nannochloropsis gaditana])

HSP 1 Score: 582.022 bits (1499), Expect = 0.000e+0
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
Query:    1 MERKAWAFICLIWCILIASTTSFDFFQSRTTSGGSFFGGSGGFPGGPGGFYRPDSGGDGENGGDSDQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLDVWPT 288
            MERKAWAFICLIWCILIASTTSFDFFQSRTTSGGSFFGGSGGFPGGPGGFYRPDSGGDGENGGDSDQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLDVWPT
Sbjct:    1 MERKAWAFICLIWCILIASTTSFDFFQSRTTSGGSFFGGSGGFPGGPGGFYRPDSGGDGENGGDSDQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLDVWPT 288          
BLAST of EWM22695.1 vs. NCBI_GenBank
Match: gi|553184683|ref|XP_005854130.1| (molecular chaperone, partial [Nannochloropsis gaditana CCMP526] >gi|422294928|gb|EKU22228.1| molecular chaperone, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
Query:    1 MERKAWAFICLIWCILIASTTSFDFFQSRTTSGGSFFGGSGGFPGGPGGFYRPDSGGDGENGGDSDQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLD 284
            MERKAWAFICLIWCILIASTTSFDFFQSRTTSGGSFFGGSGGFPGGPGGFYRPDSGGDGENGGDSDQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLD
Sbjct:    1 MERKAWAFICLIWCILIASTTSFDFFQSRTTSGGSFFGGSGGFPGGPGGFYRPDSGGDGENGGDSDQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLD 284          
BLAST of EWM22695.1 vs. NCBI_GenBank
Match: gi|795316993|ref|XP_011817602.1| (PREDICTED: dnaJ homolog subfamily A member 1 [Colobus angolensis palliatus])

HSP 1 Score: 160.614 bits (405), Expect = 1.596e-43
Identity = 91/225 (40.44%), Postives = 130/225 (57.78%), Query Frame = 0
Query:   70 YYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDE-KAFKALQEAYEVLSDPAKRRLYDAYGKAGV-EMGSGAQGGRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDR--------RLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLD 284
            YY  LG+   +T  E+K+AYR+L ++ HPDK  +E + FK + +AYEVLSD  KR LYD  G+  + E G+G   G P D+F  FFG G     G     RR  N+  Q+ +TLE+L+ GATRK+ L +  + D+        ++V E K+LE   ++GM+DG ++   GE +      PGDIII + +  H  F RR  DL   M + L EAL GF++P+  LD
Sbjct:    7 YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGGFGSPMDIFDMFFGGG-----GRMQRERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGMGFFLKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLD 226          
BLAST of EWM22695.1 vs. NCBI_GenBank
Match: gi|697888468|ref|XP_009689477.1| (molecular chaperone protein [Theileria orientalis strain Shintoku] >gi|403221043|dbj|BAM39176.1| molecular chaperone protein [Theileria orientalis strain Shintoku])

HSP 1 Score: 153.68 bits (387), Expect = 9.276e-41
Identity = 87/251 (34.66%), Postives = 131/251 (52.19%), Query Frame = 0
Query:   36 FFGGS--GGFPGGPGGFYRPDSGGDGENGGDSDQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLD 284
            FFGG    G PGG    +R     D E          Y  L +PK  T SE+K+AYR+L ++ HPDKGGD + FK + +AYE+LSDP KR++YD +G+ G++    A      D+F  FFG       G     ++  +L   ++++LE+++ G  +K+ + +     R L+   K+LE   E+G+ D  R+   GEA+   N  PG ++  + +  H TF R   DL     + L EALTG    + HLD
Sbjct:    2 FFGGFPFEGMPGGGIPHHRSKEASDTEQ--------LYKILDLPKNCTESEIKKAYRKLAIKHHPDKGGDPEKFKEISKAYEILSDPDKRKIYDEHGEDGLDGSFTATDAT--DIFDLFFG-------GRKSAKKKGEDLISHLKVSLEQIYNGTMKKLSITKDPCSGRGLIQTKKILEVIVEKGVPDQHRITFHGEADQRPNQTPGSVVFIIDQNPHDTFKRSGNDLFMTKAIPLYEALTGATFYITHLD 235          
BLAST of EWM22695.1 vs. NCBI_GenBank
Match: gi|938071123|gb|KPP69570.1| (DnaJ like protein subfamily A member 4-like, partial [Scleropages formosus])

HSP 1 Score: 152.525 bits (384), Expect = 1.652e-40
Identity = 84/221 (38.01%), Postives = 129/221 (58.37%), Query Frame = 0
Query:   67 QGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDE-KAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMG--SGAQGGRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLD 284
            + GYY  LG+   ++  E+K+AYR+L ++ HPDK  +E + FK + +AYEVLSDP KR LYD  G+  ++ G  SG     P D+F+ FFG G     G T   RR  N++ Q+ +TLEEL+ G TRK+ L +  +              A   GM+DG ++   GE +      PGD++I + + +HPTF R++ +L+ +M++ L EAL GF++ +  LD
Sbjct:   11 ETGYYDILGVNPKASSEEIKKAYRKLALKYHPDKNPNEGEKFKLISQAYEVLSDPKKRDLYDKGGEQAIKEGGVSGGDFSSPMDIFNMFFGGG-----GRTQRERRGKNVFHQLSVTLEELYNGTTRKLGLQKNVI-------------CAKCDGMKDGQKITFHGEGDQEPGLEPGDVVIVLDQKEHPTFQRQDDNLIMKMEIKLVEALCGFKKTVCTLD 213          
BLAST of EWM22695.1 vs. NCBI_GenBank
Match: gi|695411608|ref|XP_009525521.1| (hypothetical protein PHYSODRAFT_345922 [Phytophthora sojae] >gi|348676646|gb|EGZ16463.1| hypothetical protein PHYSODRAFT_345922 [Phytophthora sojae])

HSP 1 Score: 152.525 bits (384), Expect = 1.049e-39
Identity = 96/280 (34.29%), Postives = 138/280 (49.29%), Query Frame = 0
Query:   66 DQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRPEDVFSSFFG------------------------------------------SGRARGFGGTGGPRRS-----------------PNLYLQVELTLEELFKGATRKVR-LNRQK-VVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLD 284
            D   +Y  LG+PKT+T +E+K+AYR+L ++ HPDKGGD + FK +  AYEVLSDP KR LYD YG+ G++ G G  G    D+FS FF                                            GR  G GG  G  ++                 P +  Q++    +  +G  + +R  +R K    +++  E KVLE   E+GM++G R+  +GEA+      PGDII  V+E +H TF R+  +L+ E K++L EAL GFE  + HLD
Sbjct:   26 DNSKFYEALGVPKTATAAEIKKAYRKLALKNHPDKGGDPELFKTITVAYEVLSDPEKRELYDQYGEEGLQNGGG--GADASDLFSQFFRGQGGRRPRGPQKGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGRCEGRGGAEGAEKTCDTCQGRGMRVQLRHIAPGMVQQMQSVCPDC-RGQGKSIRESDRCKGCKGKKVTKERKVLEVHIEKGMRNGQRITFSGEADQAPGTVPGDIIFVVQEKEHATFQRKGGNLIMEKKISLVEALCGFEMIVEHLD 302          
BLAST of EWM22695.1 vs. NCBI_GenBank
Match: gi|465958160|gb|EMP27743.1| (DnaJ like protein subfamily A member 4 [Chelonia mydas])

HSP 1 Score: 149.828 bits (377), Expect = 1.253e-39
Identity = 82/221 (37.10%), Postives = 126/221 (57.01%), Query Frame = 0
Query:   67 QGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDE-KAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGS--GAQGGRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLD 284
            + GYY  L +  +++  E+KRAYR+L ++ HPDK   E + FK + +AYEVLSDP KR +YD  G+  ++ G   G+    P D+F  FFG G     G     RR  N+  Q+ ++LE+L+ G TRK+ L +  + ++              +GM+DG +LV  GE +   +  PGD+II + +  H  F RR  DL+ +MK+ L+E+L GF+R +  LD
Sbjct:    4 ETGYYDILQVKPSASSDEIKRAYRKLALKYHPDKNPSEGERFKLISQAYEVLSDPKKRDIYDQGGEQAIKEGGLGGSNFSSPMDIFDMFFGGG-----GRMNRERRGKNVVHQLSVSLEDLYNGVTRKLALQKNVICEKC-------------KGMKDGQKLVFHGEGDQEPDLEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIHLSESLCGFKRTIETLD 206          
BLAST of EWM22695.1 vs. NCBI_GenBank
Match: gi|301101836|ref|XP_002900006.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102581|gb|EEY60633.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 149.443 bits (376), Expect = 1.517e-38
Identity = 95/281 (33.81%), Postives = 138/281 (49.11%), Query Frame = 0
Query:   65 SDQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRPEDVFSSFFG------------------------------------------SGRARGFGGTGGPRRS-----------------PNLYLQVELTLEELFKGATRKVR-LNRQK-VVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLD 284
            +D   +Y  LG+ KT+T +E+K+AYR+L ++ HPDKGGD + FK +  AYEVLSDP KR LYD YG+ G++ G G  G    D+FS FF                                            GR  G GG  G  ++                 P +  Q++    +  +G  + +R  +R K    +++  E KVLE   E+GM++G R+  +GEA+      PGDII  V+E +H TF R+  +L+ E K++L EAL GFE  + HLD
Sbjct:   28 TDNNKFYEALGVSKTATAAEIKKAYRKLALKNHPDKGGDPELFKTITVAYEVLSDPEKRELYDQYGEEGLQNGGG--GADASDLFSQFFRGQGGRRPRGPQKGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGRCEGRGGAEGAEKTCDTCQGRGMRVQLRHIAPGMVQQMQSVCPDC-RGQGKSIRESDRCKGCKGKKVTKERKVLEVHIEKGMRNGQRITFSGEADQAPGTVPGDIIFVVQEKEHGTFQRKGGNLIMEKKISLVEALCGFEMIVEHLD 305          
BLAST of EWM22695.1 vs. NCBI_GenBank
Match: gi|1190998338|emb|SMN34114.1| (HSP40 family member 1 [Lepeophtheirus salmonis])

HSP 1 Score: 146.747 bits (369), Expect = 2.195e-38
Identity = 82/233 (35.19%), Postives = 127/233 (54.51%), Query Frame = 0
Query:   70 YYATLGIPKTSTLSEVKRAYRRLVVRLHPDKG---GDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRPEDVFSSFFGSGRARG----------------------FGGTG-GPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVV-DRRLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTG 275
            YY  LG+P+ S+  E+K+AYRRL ++ HPDK    G E+ FK + EAYEVLS+P KRR+YD YG+ GV+  SG QG  P D+F+ FFG+                           FGG G  P++ P +   + ++LE++  G  +K++++R+ V  D    +E KV+    + G + G ++  AGE +      P DI   +++  HP F R   D+  + K++L +AL G
Sbjct:    6 YYQVLGVPRGSSDEELKKAYRRLAMKFHPDKNKSPGAEERFKEIGEAYEVLSNPEKRRIYDQYGEDGVKSNSGYQGVDPRDIFAQFFGTHDPFSNIIGSGVYGASVEDMDIDISGLFGGHGRPPKKEPTIQRPIPISLEDIASGTQKKMKISRRVVSQDGSYRMENKVVTINVKPGWKAGTKITFAGEGDKYPGKIPADITFIIKDAPHPVFTRDGQDIFYKCKLSLRDALCG 238          
BLAST of EWM22695.1 vs. NCBI_GenBank
Match: gi|999981095|gb|KXJ20269.1| (DnaJ-like subfamily A member 1 [Exaiptasia pallida])

HSP 1 Score: 146.747 bits (369), Expect = 4.752e-38
Identity = 85/236 (36.02%), Postives = 131/236 (55.51%), Query Frame = 0
Query:   71 YATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDE-KAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQG-GRPEDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDR--------------------RLVVEPKVLEAAFERGMQDGARLVLAGEAEGLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLD 284
            Y  LG+   ++ SE+K++YR+L ++ HPDK   E + FK +  AYEVLSD  KR +YD  G+  ++ G    G   P D+F  FFG+GR+R      G +R  ++  Q++++LE+++ GATR++ L +  +  +                    ++V E K+LE   +RGM+DG R+   GE +   N  PGDIII + E  H  F R   DL   M++ L EAL GF+R ++ LD
Sbjct:    8 YDILGVNPEASASEIKKSYRKLALKYHPDKNPTEGEKFKQISMAYEVLSDEKKREIYDQGGEEALKGGGDGGGFHSPMDIFDMFFGTGRSR----RQGEQRGKDMVHQLKVSLEDMYNGATRQLALQKNVICSKCEGRGGKKVEKDRCKTCQGKKVVRERKILEVHIDRGMRDGQRITFHGEGDQEPNVKPGDIIIVLDESPHSIFKRDGMDLYMTMEIELVEALCGFKRTIKTLD 239          
The following BLAST results are available for this feature:
BLAST of EWM22695.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103263|gb|EWM22695.1|0.000e+0100.00chaperone protein [Nannochloropsis gaditana][more]
gi|553184683|ref|XP_005854130.1|0.000e+0100.00molecular chaperone, partial [Nannochloropsis gadi... [more]
gi|795316993|ref|XP_011817602.1|1.596e-4340.44PREDICTED: dnaJ homolog subfamily A member 1 [Colo... [more]
gi|697888468|ref|XP_009689477.1|9.276e-4134.66molecular chaperone protein [Theileria orientalis ... [more]
gi|938071123|gb|KPP69570.1|1.652e-4038.01DnaJ like protein subfamily A member 4-like, parti... [more]
gi|695411608|ref|XP_009525521.1|1.049e-3934.29hypothetical protein PHYSODRAFT_345922 [Phytophtho... [more]
gi|465958160|gb|EMP27743.1|1.253e-3937.10DnaJ like protein subfamily A member 4 [Chelonia m... [more]
gi|301101836|ref|XP_002900006.1|1.517e-3833.81conserved hypothetical protein [Phytophthora infes... [more]
gi|1190998338|emb|SMN34114.1|2.195e-3835.19HSP40 family member 1 [Lepeophtheirus salmonis][more]
gi|999981095|gb|KXJ20269.1|4.752e-3836.02DnaJ-like subfamily A member 1 [Exaiptasia pallida... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8002rna8002Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications