EWM22694.1, cds7979 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22694.1 vs. NCBI_GenBank
Match: gi|585103262|gb|EWM22694.1| (hypothetical protein Naga_100340g3 [Nannochloropsis gaditana]) HSP 1 Score: 1235.71 bits (3196), Expect = 0.000e+0 Identity = 619/619 (100.00%), Postives = 619/619 (100.00%), Query Frame = 0
Query: 1 MPRQRVKWAVGSCGRPRPWSFLPLLFPLLHPALPPLPFLPFLPPAGDGGRGMPKPETGRRRGRRGGSGPGSSWIHRDLAARAPASQALLPTPSAPPLHRHHYQQHLHHAHQPAFPSSPSPSPSSFFPSSSSSTLLALSSLSHALSSPSVAYPPTAFLPSAPLPSLSARLSALSSPDLLHMIFPFLLHRARPQEARAVLTTLSLVNRRFHALACWEEYWRPVAEGLLPVLAVPRRHSPRRQEEEKAARGAGEGGGRRGEDFRGYLLKYGHCLLHRRAWMGEALEDGFSLSFEVWDAMDGLRMLSASGPIRVQMDQQGGFTSLRMGGTHRREVPGPAFSAASRDPLRRRFASMEDYFGRGHLPEFGAALSVRVTVTDERTGRMALLWSTRKDAAYLTEAPLAYWEPFLPEGSISCFLDHWSPLMCPAYDGESMTVTIGFHVCPEAAGEDGEGGEGGRGCGGAGEAVPTGGGGRGAVRRAPVLHLHHLHDPQHQRDTPVLPLSAQGGVTTGGKGKGRGRARKNAMFPVQKFKRLPFYTTEGLRAVCNHRSVEACIVYIGRSAGREAAVRRGAEPGPLEGHGLCGTGNIRQAFSKLACSRKSSADSQTLTEFEGPGRGTRVRK 619
MPRQRVKWAVGSCGRPRPWSFLPLLFPLLHPALPPLPFLPFLPPAGDGGRGMPKPETGRRRGRRGGSGPGSSWIHRDLAARAPASQALLPTPSAPPLHRHHYQQHLHHAHQPAFPSSPSPSPSSFFPSSSSSTLLALSSLSHALSSPSVAYPPTAFLPSAPLPSLSARLSALSSPDLLHMIFPFLLHRARPQEARAVLTTLSLVNRRFHALACWEEYWRPVAEGLLPVLAVPRRHSPRRQEEEKAARGAGEGGGRRGEDFRGYLLKYGHCLLHRRAWMGEALEDGFSLSFEVWDAMDGLRMLSASGPIRVQMDQQGGFTSLRMGGTHRREVPGPAFSAASRDPLRRRFASMEDYFGRGHLPEFGAALSVRVTVTDERTGRMALLWSTRKDAAYLTEAPLAYWEPFLPEGSISCFLDHWSPLMCPAYDGESMTVTIGFHVCPEAAGEDGEGGEGGRGCGGAGEAVPTGGGGRGAVRRAPVLHLHHLHDPQHQRDTPVLPLSAQGGVTTGGKGKGRGRARKNAMFPVQKFKRLPFYTTEGLRAVCNHRSVEACIVYIGRSAGREAAVRRGAEPGPLEGHGLCGTGNIRQAFSKLACSRKSSADSQTLTEFEGPGRGTRVRK
Sbjct: 1 MPRQRVKWAVGSCGRPRPWSFLPLLFPLLHPALPPLPFLPFLPPAGDGGRGMPKPETGRRRGRRGGSGPGSSWIHRDLAARAPASQALLPTPSAPPLHRHHYQQHLHHAHQPAFPSSPSPSPSSFFPSSSSSTLLALSSLSHALSSPSVAYPPTAFLPSAPLPSLSARLSALSSPDLLHMIFPFLLHRARPQEARAVLTTLSLVNRRFHALACWEEYWRPVAEGLLPVLAVPRRHSPRRQEEEKAARGAGEGGGRRGEDFRGYLLKYGHCLLHRRAWMGEALEDGFSLSFEVWDAMDGLRMLSASGPIRVQMDQQGGFTSLRMGGTHRREVPGPAFSAASRDPLRRRFASMEDYFGRGHLPEFGAALSVRVTVTDERTGRMALLWSTRKDAAYLTEAPLAYWEPFLPEGSISCFLDHWSPLMCPAYDGESMTVTIGFHVCPEAAGEDGEGGEGGRGCGGAGEAVPTGGGGRGAVRRAPVLHLHHLHDPQHQRDTPVLPLSAQGGVTTGGKGKGRGRARKNAMFPVQKFKRLPFYTTEGLRAVCNHRSVEACIVYIGRSAGREAAVRRGAEPGPLEGHGLCGTGNIRQAFSKLACSRKSSADSQTLTEFEGPGRGTRVRK 619
BLAST of EWM22694.1 vs. NCBI_GenBank
Match: gi|585103442|gb|EWM22815.1| (hypothetical protein Naga_100437g2 [Nannochloropsis gaditana]) HSP 1 Score: 127.487 bits (319), Expect = 2.579e-27 Identity = 81/251 (32.27%), Postives = 119/251 (47.41%), Query Frame = 0
Query: 192 QEARAVLTTLSLVNRRFHALACWEEYWRPVAEGLLPVLAVPRRHSPRRQEEEKAARGAGEGGGRRGEDFRGYLLKYGHCLLHRRAWMGEALEDGFSLSFEVWDAMDGLRMLSASGPIRVQMDQQGGFTSLRMGGTHRREVPGPAFSAASRDPLRRRFASMEDYFGRGHLPEFGAALSVRVTVTDERTGRMALLWSTR-KDAAYLTEAPLAYWEPFLPEGSISCFLDHWSPLMCPAYDGESMTVTIGFHVCP 441
Q R L L V R + A A + +WRP+ LP L + A E + +R L+Y CL GE LSFE++D D +R+ ASGP+ V + G T+LR+ GT R EV P FSA SRDP+ +RF ++ Y P+F L VRV TD RTG AL++++ K + ++ L +W FLP S+ + + WS + E++ ++ F+V P
Sbjct: 265 QAVRVNLAPLLTVARLWRATASQDRFWRPIVSWTLPTLTM----------------DAKETRTTKPFPYRQAFLRYARCLALPVVGDGEEWHAHVLLSFEIYDVQDSMRLFVASGPLEVIQSTESGLTALRLTGTKRSEVCRP-FSAKSRDPVNKRFENISAYLCHSWRPDFPVGLRVRVVATDARTGTQALIYNSEPKTKRSVKDSTLNFWRRFLPRHSLFVW-EAWSRWVLQNGTQEAVEISTSFYVSP 497
BLAST of EWM22694.1 vs. NCBI_GenBank
Match: gi|553182510|ref|XP_005853741.1| (hypothetical protein NGA_0168202 [Nannochloropsis gaditana CCMP526] >gi|422295323|gb|EKU22622.1| hypothetical protein NGA_0168202 [Nannochloropsis gaditana CCMP526] >gi|585113057|gb|EWM30397.1| hypothetical protein Naga_100026g9 [Nannochloropsis gaditana]) HSP 1 Score: 120.553 bits (301), Expect = 4.893e-25 Identity = 104/312 (33.33%), Postives = 152/312 (48.72%), Query Frame = 0
Query: 156 FLPSAPLPSLSARLSALSSPDLLHMIFPFLLHRARPQEARAVLTTLSLVNRRFHALACWEEYWRPVAEGLLPVLAVPRRHSPR--RQEEEKAARG------------------------AGEGGGRRGEDFRGYLLKYGHCLLHRRAWMGEALEDGFSLSFEVWDAMDGLRMLSASGPIRVQMDQQGGFTSLRMGGTHRREVPGPAFSAASRDPLRRRFASMEDYFGRGHLPEFGAALSVRVTVTDERTGRMALLWSTRKDAAYLTEAPLAYWEPFLPEGSISCFLDHWSPLMCPAYDGESMTVTIGFHVCP 441
+P P P++ A +AL LLH F FL+ R Q R L L+LV R++ LA + +W+PV L P R SP +EE A G + GGR G R YL+++G CL R G +G +LSF++ D DG R+ S++GPIR G T++++ G RR V P FSAASRD +S+E+ F G ++ + ++RVT DERTG+MALL+S+ K E PL + +P+G++ WS + P+ D +T+ F+V P
Sbjct: 221 LMPPIPHPAVPAPSTALGDAALLHYCFDFLVE-GRLQ-YRKQLGDLALVCRQWRDLAQADRFWKPVVLQLFP------RLSPALADHDEEDGASGPDPDAAALTEAAVDGAGAGASSEPSTSPGGRAGW-HRKYLIQFGRCLFDRPIRQG-PWHEGITLSFDLHDEQDGTRLFSSTGPIRFTGTTIPGITAMKLTG-RRRRVTAP-FSAASRDRGLGNLSSIEELFQEGDSRDYPVSFTIRVTARDERTGKMALLFSSAKRTKRWVE-PLGE-DMGVPQGTL-LVNQGWSRVTIPSTDLAMQMLTV-FYVAP 516
BLAST of EWM22694.1 vs. NCBI_GenBank
Match: gi|585105795|gb|EWM24393.1| (hypothetical protein Naga_100283g6 [Nannochloropsis gaditana]) HSP 1 Score: 62.7734 bits (151), Expect = 2.618e-7 Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 0
Query: 284 DGFSLSFEVWDAMDGLRMLSASGPIRVQMDQQGGFTSLRMGGTHRREVPGPA----FSAASRDPLRRRFASMEDYFGRGHLPEFGAALSVRVTVTDERTGRMALLWSTRKDA 391
+ ++LS E++D G R+ + G + + M Q G M + V G A FSAASRD + RF +++DYF R H P L VT ++TGRMA+L+++ K++
Sbjct: 22 EEYTLSVEIFDRKGGFRLFCSYGRVSI-MHQGVGVEGRWMT---KLAVTGFASCWHFSAASRDSVHGRFETIKDYFERAHEPGLEHCLCTEVTAMHKKTGRMAVLYASSKES 129 The following BLAST results are available for this feature:
BLAST of EWM22694.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|