EWM22697.1, cds7975 (CDS) Nannochloropsis gaditana

Overview
NameEWM22697.1
Unique Namecds7975
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:316731..317125 +
Alignment locationKK037247.1:317320..317635 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22697.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100340g7.5993.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:316731..317125 +
KK037247.1supercontigKK037247.1:317320..317635 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22697.1 vs. NCBI_GenBank
Match: gi|585103265|gb|EWM22697.1| (hypothetical protein Naga_100340g7 [Nannochloropsis gaditana])

HSP 1 Score: 491.115 bits (1263), Expect = 9.615e-176
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0 
Query:    1 MYDLKSPHEHSSCKDFAFHEATYIRMHVLNPTHAAASWRAGVPLAPITMTAPLHSQTQHLTVMSDAEVCDVVEDTFTFRFDKLYDFVRGHVVDTLRKPRLVLAVGWHEETSTPTGELDVQFQAISVARISFRPHWTAPYLDVSMQTPASRVFQSAFASLATTAALSTALRNIQALPESLEYTKGAGDVFNGTFDRIRRGLWDLIDYGKPLLFAGAPLPLVLFVTRKDQGSCSNERK 236
            MYDLKSPHEHSSCKDFAFHEATYIRMHVLNPTHAAASWRAGVPLAPITMTAPLHSQTQHLTVMSDAEVCDVVEDTFTFRFDKLYDFVRGHVVDTLRKPRLVLAVGWHEETSTPTGELDVQFQAISVARISFRPHWTAPYLDVSMQTPASRVFQSAFASLATTAALSTALRNIQALPESLEYTKGAGDVFNGTFDRIRRGLWDLIDYGKPLLFAGAPLPLVLFVTRKDQGSCSNERK
Sbjct:    1 MYDLKSPHEHSSCKDFAFHEATYIRMHVLNPTHAAASWRAGVPLAPITMTAPLHSQTQHLTVMSDAEVCDVVEDTFTFRFDKLYDFVRGHVVDTLRKPRLVLAVGWHEETSTPTGELDVQFQAISVARISFRPHWTAPYLDVSMQTPASRVFQSAFASLATTAALSTALRNIQALPESLEYTKGAGDVFNGTFDRIRRGLWDLIDYGKPLLFAGAPLPLVLFVTRKDQGSCSNERK 236
[Close]
BLAST of EWM22697.1 vs. NCBI_GenBank
Match: gi|553185955|ref|XP_005854336.1| (hypothetical protein NGA_0186000 [Nannochloropsis gaditana CCMP526] >gi|422294720|gb|EKU22020.1| hypothetical protein NGA_0186000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 389.037 bits (998), Expect = 4.199e-136
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0 
Query:   49 MTAPLHSQTQHLTVMSDAEVCDVVEDTFTFRFDKLYDFVRGHVVDTLRKPRLVLAVGWHEETSTPTGELDVQFQAISVARISFRPHWTAPYLDVSMQTPASRVFQSAFASLATTAALSTALRNIQALPESLEYTKGAGDVFNGTFDRIRRGLWDLIDYGKPLLFAGAPLPLVLFVTRKDQGSCSNERK 236
            MTAPLHSQTQHLTVMSDAEVCDVVEDTFTFRFDKLYDFVRGHVVDTLRKPRLVLAVGWHEETSTPTGELDVQFQAISVARISFRPHWTAPYLDVSMQTPASRVFQSAFASLATTAALSTALRNIQALPESLEYTKGAGDVFNGTFDRIRRGLWDLIDYGKPLLFAGAPLPLVLFVTRKDQGSCSNERK
Sbjct:    1 MTAPLHSQTQHLTVMSDAEVCDVVEDTFTFRFDKLYDFVRGHVVDTLRKPRLVLAVGWHEETSTPTGELDVQFQAISVARISFRPHWTAPYLDVSMQTPASRVFQSAFASLATTAALSTALRNIQALPESLEYTKGAGDVFNGTFDRIRRGLWDLIDYGKPLLFAGAPLPLVLFVTRKDQGSCSNERK 188
The following BLAST results are available for this feature:
BLAST of EWM22697.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585103265|gb|EWM22697.1|9.615e-176100.00hypothetical protein Naga_100340g7 [Nannochloropsi... [more]
gi|553185955|ref|XP_005854336.1|4.199e-136100.00hypothetical protein NGA_0186000 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7997rna7997Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications