EWM22722.1, cds7949 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22722.1 vs. NCBI_GenBank
Match: gi|585103305|gb|EWM22722.1| (dna ligase [Nannochloropsis gaditana]) HSP 1 Score: 941.414 bits (2432), Expect = 0.000e+0 Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0
Query: 1 MEWSTGVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGVPPTTATTSNNPKRGTLARQCSPSSTTSSSPPPLPPFLPPPSAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAKEKDRILRRFRGVLDDAEGKRAFLSLFGKRGGDGAREGRGE 460
MEWSTGVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGVPPTTATTSNNPKRGTLARQCSPSSTTSSSPPPLPPFLPPPSAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAKEKDRILRRFRGVLDDAEGKRAFLSLFGKRGGDGAREGRGE
Sbjct: 1 MEWSTGVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGVPPTTATTSNNPKRGTLARQCSPSSTTSSSPPPLPPFLPPPSAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAKEKDRILRRFRGVLDDAEGKRAFLSLFGKRGGDGAREGRGE 460
BLAST of EWM22722.1 vs. NCBI_GenBank
Match: gi|873218389|emb|CEM39468.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 265.388 bits (677), Expect = 1.243e-74 Identity = 171/456 (37.50%), Postives = 237/456 (51.97%), Query Frame = 0
Query: 3 WSTGVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAP---GVPPTTAT-------TSNNPKRGTLARQC-SPSSTTSSSPPPLPPFLPPPSAPSPR----PKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAKEKDRILRRFRGVLDDAEGKRAFL 443
W GVI+CS ITARLL IM V +YV+A+ + + + G G + VTL+DA+HCPGA M LF + + + LH GD R+HPR+L + AL H +K+D IYLDTTY+HPKH F QE AIQS+ D+I L E P G+ P A+ T+N+ L + SP ++ +++ +TLFL+SAY+IGKE++ L VA+ + IY++E K +I CL + + + FTTD T VHV M CGEMWPFF+PNF+NLE LE+ Y+ V FIPTGWAESSN+NR+NAV+ +G +V+L YSEH+ F +L+ FV L+P +V+PTV+SD ++ IL+RF+ L+ G RAFL
Sbjct: 47 WDRGVIHCSPITARLLLEIMAVAPRYVKAMALD----VAHDMGDGHK------VTLIDAHHCPGAVMFLFELSSGKA--------------------------FLHTGDFRFHPRILQHPALQH-------------KKIDGIYLDTTYSHPKHVFPPQETAIQSIVDVIQETLASERPPNTPPLVGLAPLAASKADAAGETANDGGEELLEGEVRSPEASAAAAAAAAAAAASGGEGEEDVERIPKRTLFLVSAYTIGKEKIPLAVAKTCGVKIYLEERKSRIFRCLGM---------ADEDIAAFTTDPAATPVHVVGMDMCGEMWPFFRPNFANLESYLEKH-NLIRTYSHVTGFIPTGWAESSNWNRKNAVKTRG---------------HYEVRLYAYSEHSNFQELVTFVDTLKPTQVIPTVFSDDNDRKNILKRFQPHLNKTAGVRAFL 428
BLAST of EWM22722.1 vs. NCBI_GenBank
Match: gi|971507314|dbj|GAQ90890.1| (putative DNA ligase 1 [Klebsormidium nitens]) HSP 1 Score: 236.113 bits (601), Expect = 1.841e-64 Identity = 158/468 (33.76%), Postives = 226/468 (48.29%), Query Frame = 0
Query: 3 WSTGVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGV---PPTTATTSNNPKRGTLARQCSPSSTTSSSPP-----PLPPFLPPP--SAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAKEKD-----RILRRFRGVLDDAEGKRAFLSLFGKRGGDGAR 455
W GVI+CS TAR++ ++ V +V LPM EV + G VTL+DANHCPGA LFR+ G+ + ++HCGDMR+ +M L A D +YLDTTY +P++ F QE +++ + + AR+++ E + P + A NP S PP PL L P S PRP LF+++ Y IGKE++L VA R IYVDE K+KIL CL L + L S FT D ++T VHV GF G+ WPFF+ NF+N+E+ L+E GY + F+PTGW + REKG R K+ L+PYSEH+ +A+L ++V +L+P++++PTV D K D + + FR ++D+ EGKR FL F +R G G++
Sbjct: 122 WRKGVIFCSETTARMVVQVLEVPPHFVVPLPMDREVEID-----------GCGVTLIDANHCPGAIQFLFRIP---GAPEK---------------------RYVHCGDMRFCTQMTANPCLAPYVGA------------DAVYLDTTYCNPRYVFPLQEASVEYIAATVAARMQEWRAEYDAWIKEQPNSGAAAETNPA-------GDGEGVGSGDPPEGEASPLERVLAQPVDSTDCPRP-PLFIIATYVIGKEKILYAVAHRCGCKIYVDERKIKILRCLGL---------NDL--SIFTNDSSKTNVHVVGWGFLGDAWPFFRANFTNMEQALDER-----GYEKAVGFVPTGWTYELK-KKAFPTREKG---------------RCKIHLVPYSEHSNYAELREYVSFLKPKQIIPTVGVDEKGMDGKAVAAMRKHFRNLVDETEGKRRFLRSF-QRSGSGSK 501
BLAST of EWM22722.1 vs. NCBI_GenBank
Match: gi|551672526|ref|XP_005839019.1| (hypothetical protein GUITHDRAFT_65538 [Guillardia theta CCMP2712] >gi|428183181|gb|EKX52039.1| hypothetical protein GUITHDRAFT_65538 [Guillardia theta CCMP2712]) HSP 1 Score: 219.935 bits (559), Expect = 8.138e-64 Identity = 139/415 (33.49%), Postives = 200/415 (48.19%), Query Frame = 0
Query: 6 GVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGVPPTTATTSNNPKRGTLARQCSPSSTTSSSPPPLPPFLPPPSAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAK 420
G IYC+ T L+ V+ L + +E+ + + G G VT LDANHCPGA +LLF + ++ T+HLH GDMRY +M Y P R +D +YLDTTY HPKH F Q+ +I D+I + +E G ++P R L LLSAY IGKER++ EVARR + +YVDEAKM+++ CL + S S FT + E+ +H+CRMGF G++WPFF+PNF N+E+ +++ +T AFIPTGWA+SSN+N++N+++ KG V+ +PYSEH+ + +L++FV +LRPR V PTV++D K
Sbjct: 53 GRIYCTKTTGDLV----------VQELKVRKELVVCYEYGESAHVCGA-KVTFLDANHCPGAALLLFEL--------------------------EDGTVHLHTGDMRYDKKMKEY-----------PELVCRRGLIDRVYLDTTYCHPKHVFPGQDKSI----DIIAS-----DQEAIDGAQENR--DGDDPSR-----------------------------------RLVLLSAYKIGKERVICEVARRAKAKVYVDEAKMRVMRCLRM---------SEEDLSVFTCNMRESQIHICRMGFAGDIWPFFRPNFVNIERYIKDNDLP---FTSCMAFIPTGWADSSNYNKKNSLQFKGN---------------FSVKCVPYSEHSNYNELVEFVEFLRPRNVFPTVFTDEK 346
BLAST of EWM22722.1 vs. NCBI_GenBank
Match: gi|1026763507|gb|OAE24541.1| (hypothetical protein AXG93_2415s1200 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 218.394 bits (555), Expect = 1.916e-58 Identity = 147/467 (31.48%), Postives = 209/467 (44.75%), Query Frame = 0
Query: 3 WSTGVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGVPPTTATTSNNP---------------KRGTLARQCSPSSTTSSSPPPLPPFLPPPSAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSD-----AKEKDRILRRFRGVLDDAEGKRAFLSLFGKR 449
W G+I+CS ITA L+ + V A V LPM E V + G V L+DANHCPGA LFRV G R ++HCGDMRYHP M AL A D ++LDTTY +PK+ F +Q++++ V + + RL + E + P K T S L S P TLFL+S Y IGKE++L VA+R IYV E K+ +L+CL+L FTTD + T VHV + F GE WP+F+PNF +EK ++E GY +V F+PTGW + +VR+KG ++ L+PYSEH+ + +L ++VG+LRP+ ++PTV D +K + + FR ++D+ K+ FL F ++
Sbjct: 121 WHKGLIFCSAITANLVKQSLQVPAALVVPLPMGETVTI-----------DGCEVALVDANHCPGAVQFLFRVPGEGGECLR----------------------YVHCGDMRYHPFMKSEPALFDYVGA------------DAVFLDTTYCNPKYIFPSQQESVDYVAETV-ERLMEADVEAPRAEEDEDLVMEDRPEALDEEEEEDVEGLQKPSTAGVNVEGQSKKDVVEDEEDEALFSRSGPLEGRSTLFLISTYVIGKEKILTAVAKRCNCLIYVTEKKLSVLKCLNLENI-----------DIFTTDPSATNVHVVQWSFLGETWPYFRPNFLKMEKAMKE-----SGYKKVVGFVPTGWTYELK-KKTFSVRKKGP---------------FEIHLVPYSEHSNYEELREYVGFLRPKEIIPTVGLDGGGMESKAVATMRKHFRNLVDETASKKNFLKGFSRK 509
BLAST of EWM22722.1 vs. NCBI_GenBank
Match: gi|219121698|ref|XP_002181198.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407184|gb|EEC47121.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 201.83 bits (512), Expect = 1.707e-55 Identity = 140/453 (30.91%), Postives = 205/453 (45.25%), Query Frame = 0
Query: 7 VIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGVPPTTATTSNNPKRGTLARQCSPSSTTSSSPPPLPPFLPPPSAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNF---SNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAKEKDRILRRFRGVLDDAEGKRAFLSLFGKRGGDGARE 456
+I+C+ TA LL I V +YV E ++P + + +T DANHCPGA +++ + + +HLH GDMRYH M Y L R A R +DT+ LDTTY+ PKH F QE AI ++ L GT + CS L LLS YSIGKE++L EV+ RT +YV++ KM+++ C+ + SS TTD T +HV MG GE+WP+F+PN+ + K LE E YT+V AFIPTGWA+ S +N++NA + G ++++LI YSEH+ F++L FV +LRPR+VVPTV+ D +++ +I RF +D K++F S + + ++
Sbjct: 60 LIHCTPTTAALLREIHQVPEKYVVEHGYGE--TWLFHPLGNTKGLSTVQITFYDANHCPGAAIIVVEMADGK--------------------------VHLHTGDMRYHTMMNVYPIL---------ERAASSRAIDTVLLDTTYSDPKHNFQPQEAAIDAIAAYSEGLL------------------------GTSRKCCS--------------------------NVLILLSCYSIGKEKVLWEVSSRTNQLVYVNDRKMRMMRCI-----QKHHESSSQIVQRCTTDPNATDIHVIPMGLAGELWPYFQPNYWACAEYAKALETE------YTKVVAFIPTGWADGSKWNKKNATSKFDCKG-----------IEVEIRLISYSEHSSFSELKTFVEFLRPRKVVPTVFKDDRDRVKIEGRF--AIDSGRAKQSFFSTMTSKSSNIGKQ 401
BLAST of EWM22722.1 vs. NCBI_GenBank
Match: gi|223532518|gb|EEF34307.1| (DNA ligase I, putative [Ricinus communis]) HSP 1 Score: 207.608 bits (527), Expect = 8.596e-55 Identity = 134/456 (29.39%), Postives = 213/456 (46.71%), Query Frame = 0
Query: 3 WSTGVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGVPPTTATTSNNPKRGTLARQCSPSSTTSSSPPPLPPFLPPPSAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAKEKD-----RILRRFRGVLDDAEGKRAFLSLFGKRGGDG 453
WS G+I+CS ITA L+T I+ V +Q+V LP+++ V + G +TL+DANHCPGA LLF+VR+ SG F +++H GD RY R + +L D D ++LDTTY +PK F Q+++I D +++ + + G + A S R LFL++ Y +GKER+L+E+A+R R ++VD KM++L L S FT D+ ++ VHV GE WP+F+PNF+N+++ + E GY+R+ F+PTGW N+ +VR K ++ L+PYSEH+ + +L ++V +LRP+RV+PTV D + D ++ + F G++D+ K+ FL +F + +
Sbjct: 87 WSQGMIFCSQITANLVTRILNVPSQFVYPLPLNDTVII-----------DGSEITLIDANHCPGAVQLLFKVRS------------------SGT-----FEMYVHTGDFRY-SREMKEVGILRDFVGC-----------DAVFLDTTYCNPKFVFPKQQESI----DYVVSVIERIGGDF--------------------------------------------QAMSKR--VLFLVATYVVGKERILIEIAKRCRRKVHVDRRKMEVLRVLGYGES-----------GVFTEDEGQSDVHVVGWNVLGETWPYFRPNFANMKEIMVER-----GYSRIVGFVPTGWTYEVKHNKF-SVRSKDS---------------FEIHLVPYSEHSNYDELREYVKFLRPKRVIPTVGVDIENLDSKHAVKMQKHFAGLVDEMANKKQFLMVFHRESSES 414
BLAST of EWM22722.1 vs. NCBI_GenBank
Match: gi|1000948683|ref|XP_015580202.1| (PREDICTED: DNA ligase 1 [Ricinus communis]) HSP 1 Score: 207.608 bits (527), Expect = 8.648e-55 Identity = 134/456 (29.39%), Postives = 213/456 (46.71%), Query Frame = 0
Query: 3 WSTGVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGVPPTTATTSNNPKRGTLARQCSPSSTTSSSPPPLPPFLPPPSAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAKEKD-----RILRRFRGVLDDAEGKRAFLSLFGKRGGDG 453
WS G+I+CS ITA L+T I+ V +Q+V LP+++ V + G +TL+DANHCPGA LLF+VR+ SG F +++H GD RY R + +L D D ++LDTTY +PK F Q+++I D +++ + + G + A S R LFL++ Y +GKER+L+E+A+R R ++VD KM++L L S FT D+ ++ VHV GE WP+F+PNF+N+++ + E GY+R+ F+PTGW N+ +VR K ++ L+PYSEH+ + +L ++V +LRP+RV+PTV D + D ++ + F G++D+ K+ FL +F + +
Sbjct: 87 WSQGMIFCSQITANLVTRILNVPSQFVYPLPLNDTVII-----------DGSEITLIDANHCPGAVQLLFKVRS------------------SGT-----FEMYVHTGDFRY-SREMKEVGILRDFVGC-----------DAVFLDTTYCNPKFVFPKQQESI----DYVVSVIERIGGDF--------------------------------------------QAMSKR--VLFLVATYVVGKERILIEIAKRCRRKVHVDRRKMEVLRVLGYGES-----------GVFTEDEGQSDVHVVGWNVLGETWPYFRPNFANMKEIMVER-----GYSRIVGFVPTGWTYEVKHNKF-SVRSKDS---------------FEIHLVPYSEHSNYDELREYVKFLRPKRVIPTVGVDIENLDSKHAVKMQKHFAGLVDEMANKKQFLMVFHRESSES 414
BLAST of EWM22722.1 vs. NCBI_GenBank
Match: gi|702374256|ref|XP_010062220.1| (PREDICTED: DNA ligase 6 isoform X3 [Eucalyptus grandis]) HSP 1 Score: 207.223 bits (526), Expect = 1.041e-54 Identity = 140/449 (31.18%), Postives = 203/449 (45.21%), Query Frame = 0
Query: 3 WSTGVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGVPPTTATTSNNPKRGTLARQCSPSSTTSSSPPPLPPFLPPPSAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAKEKD-----RILRRFRGVLDDAEGKRAFLSLF 446
WS GV++CS T+RLL +++GV A+ V +LP+ E + + G V L+DANHCPGA M LF+V G EF ++H GD R+ M P D I+LDTTY +PK F +QE++I V +I R+ E R+ A + LFL++ Y IGKER+LLEVARR +YVD KM +L L S FT D++ET VHV GE WP+F+PNF +++ + E+ GY +V F+PTGW ++ A+R+K ++ L+PYSEH+ + +L +FV +L+P+RV+PTV SD ++ D R+ + F G+LD+ K+ FL F
Sbjct: 83 WSRGVVFCSPTTSRLLIDVLGVPARLVVSLPVGEALSID-----------GCEVRLVDANHCPGAVMFLFKVPGGGGG---------------------EFRRYVHTGDFRFRDSM------------RSEPGLGEFVACDAIFLDTTYCNPKFVFPSQEESIDYVASVI-ERVGVENRDSAKNI-------------------------------------------------LFLVATYVIGKERILLEVARRCGCKVYVDGRKMAVLRALGYSES-----------GAFTEDESETAVHVVGWNVLGETWPYFRPNFVQMKELIVEK-----GYNKVVGFVPTGWTYEVKRDKF-AIRKKDS---------------FEIHLVPYSEHSNYNELREFVKFLKPKRVIPTVGSDIEKLDGKHFHRVQKLFAGLLDETANKKEFLMNF 405
BLAST of EWM22722.1 vs. NCBI_GenBank
Match: gi|702374259|ref|XP_010062221.1| (PREDICTED: DNA ligase 6 isoform X4 [Eucalyptus grandis]) HSP 1 Score: 207.223 bits (526), Expect = 1.194e-54 Identity = 140/449 (31.18%), Postives = 203/449 (45.21%), Query Frame = 0
Query: 3 WSTGVIYCSTITARLLTNIMGVQAQYVRALPMHEEVPLPWNPGRGGREEGGLSVTLLDANHCPGACMLLFRVRTCRGSSTRCNGDHSRGAEVSGRERDDEFTLHLHCGDMRYHPRMLHYAALLHDTTASHPPRPARPRKLDTIYLDTTYAHPKHAFAAQEDAIQSVGDLILARLRKEGREVAPGVPPTTATTSNNPKRGTLARQCSPSSTTSSSPPPLPPFLPPPSAPSPRPKTLFLLSAYSIGKERLLLEVARRTRLPIYVDEAKMKILECLDLPPSRPPSPPSSLPPSPFTTDKTETCVHVCRMGFCGEMWPFFKPNFSNLEKKLEEEAREGGGYTRVYAFIPTGWAESSNFNRRNAVREKGGGGSVEGGKEGGGEARIKVQLIPYSEHTPFADLLDFVGYLRPRRVVPTVWSDAKEKD-----RILRRFRGVLDDAEGKRAFLSLF 446
WS GV++CS T+RLL +++GV A+ V +LP+ E + + G V L+DANHCPGA M LF+V G EF ++H GD R+ M P D I+LDTTY +PK F +QE++I V +I R+ E R+ A + LFL++ Y IGKER+LLEVARR +YVD KM +L L S FT D++ET VHV GE WP+F+PNF +++ + E+ GY +V F+PTGW ++ A+R+K ++ L+PYSEH+ + +L +FV +L+P+RV+PTV SD ++ D R+ + F G+LD+ K+ FL F
Sbjct: 83 WSRGVVFCSPTTSRLLIDVLGVPARLVVSLPVGEALSID-----------GCEVRLVDANHCPGAVMFLFKVPGGGGG---------------------EFRRYVHTGDFRFRDSM------------RSEPGLGEFVACDAIFLDTTYCNPKFVFPSQEESIDYVASVI-ERVGVENRDSAKNI-------------------------------------------------LFLVATYVIGKERILLEVARRCGCKVYVDGRKMAVLRALGYSES-----------GAFTEDESETAVHVVGWNVLGETWPYFRPNFVQMKELIVEK-----GYNKVVGFVPTGWTYEVKRDKF-AIRKKDS---------------FEIHLVPYSEHSNYNELREFVKFLKPKRVIPTVGSDIEKLDGKHFHRVQKLFAGLLDETANKKEFLMNF 405 The following BLAST results are available for this feature:
BLAST of EWM22722.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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